RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 TCP10L2B9ZVM9 353 aa29.2■■■□□ 2.26
TMEM54-201ENST00000329151 IFIT1P09914 478 aaKnown RBP29.2■■■□□ 2.26
TMEM54-201ENST00000329151 FBXO46Q6PJ61 603 aaPredicted RBP29.2■■■□□ 2.26
TMEM54-201ENST00000329151 ANKRD44Q8N8A2 993 aa29.2■■■□□ 2.26
TMEM54-201ENST00000329151 SMC4Q9NTJ3 1288 aa29.2■■■□□ 2.26
TMEM54-201ENST00000329151 FBXO33Q7Z6M2 555 aa29.19■■■□□ 2.26
TMEM54-201ENST00000329151 TEKT1Q969V4 418 aa29.19■■■□□ 2.26
TMEM54-201ENST00000329151 MYH13Q9UKX3 1938 aa29.19■■■□□ 2.26
TMEM54-201ENST00000329151 AOX1Q06278 1338 aa29.19■■■□□ 2.26
TMEM54-201ENST00000329151 USP2O75604 605 aaPredicted RBP29.18■■■□□ 2.26
TMEM54-201ENST00000329151 PUM3Q15397 648 aaKnown RBP29.18■■■□□ 2.26
TMEM54-201ENST00000329151 MAST3O60307 1309 aa29.18■■■□□ 2.26
TMEM54-201ENST00000329151 ALDH1L2Q3SY69 923 aa29.17■■■□□ 2.26
TMEM54-201ENST00000329151 ELP3Q9H9T3 547 aa29.17■■■□□ 2.26
TMEM54-201ENST00000329151 HDLBPQ00341 1268 aaKnown RBP29.16■■■□□ 2.26
TMEM54-201ENST00000329151 SLFN5Q08AF3 891 aa29.16■■■□□ 2.26
TMEM54-201ENST00000329151 KLHDC4Q8TBB5 520 aa29.16■■■□□ 2.26
TMEM54-201ENST00000329151 USP44Q9H0E7 712 aa29.16■■■□□ 2.26
TMEM54-201ENST00000329151 CSADQ9Y600 493 aa29.16■■■□□ 2.26
TMEM54-201ENST00000329151 OTOFQ9HC10 1997 aa29.15■■■□□ 2.26
TMEM54-201ENST00000329151 SLC5A1P13866 664 aa29.15■■■□□ 2.26
TMEM54-201ENST00000329151 LAMB1P07942 1786 aa29.14■■■□□ 2.26
TMEM54-201ENST00000329151 BCAMP50895 628 aa29.14■■■□□ 2.26
TMEM54-201ENST00000329151 OPTNQ96CV9 577 aa29.14■■■□□ 2.26
TMEM54-201ENST00000329151 HOOK2Q96ED9 719 aa29.14■■■□□ 2.26
TMEM54-201ENST00000329151 TMEM39BQ9GZU3 492 aa29.14■■■□□ 2.26
TMEM54-201ENST00000329151 R3HDMLQ9H3Y0 253 aa29.14■■■□□ 2.26
TMEM54-201ENST00000329151 HDAC5Q9UQL6 1122 aa29.14■■■□□ 2.26
TMEM54-201ENST00000329151 IGF2BP3O00425 579 aaKnown RBP eCLIP29.13■■■□□ 2.25
TMEM54-201ENST00000329151 ERO1AQ96HE7 468 aa29.13■■■□□ 2.25
TMEM54-201ENST00000329151 TRIM17Q9Y577 477 aa29.13■■■□□ 2.25
TMEM54-201ENST00000329151 EYA2O00167 538 aa29.12■■■□□ 2.25
TMEM54-201ENST00000329151 WDHD1O75717 1129 aaPredicted RBP29.12■■■□□ 2.25
TMEM54-201ENST00000329151 UBTFL1P0CB47 393 aaPredicted RBP29.12■■■□□ 2.25
TMEM54-201ENST00000329151 VGLL2Q8N8G2 317 aa29.12■■■□□ 2.25
TMEM54-201ENST00000329151 SUGT1Q9Y2Z0 365 aa29.12■■■□□ 2.25
TMEM54-201ENST00000329151 KIF16BQ96L93 1317 aa29.12■■■□□ 2.25
TMEM54-201ENST00000329151 MAP3K9P80192 1104 aa29.11■■■□□ 2.25
TMEM54-201ENST00000329151 AK9Q5TCS8 1911 aa29.11■■■□□ 2.25
TMEM54-201ENST00000329151 TNRC18O15417 2968 aaPredicted RBP29.1■■■□□ 2.25
TMEM54-201ENST00000329151 LPIN2Q92539 896 aa29.1■■■□□ 2.25
TMEM54-201ENST00000329151 WDR66Q8TBY9 1149 aa29.09■■■□□ 2.25
TMEM54-201ENST00000329151 GNL3LQ9NVN8 582 aaKnown RBP29.09■■■□□ 2.25
TMEM54-201ENST00000329151 GJA5P36382 358 aa29.08■■■□□ 2.25
TMEM54-201ENST00000329151 CACNB3P54284 484 aa29.08■■■□□ 2.25
TMEM54-201ENST00000329151 CRHR2Q13324 411 aa29.08■■■□□ 2.25
TMEM54-201ENST00000329151 GRIK5Q16478 980 aa29.08■■■□□ 2.25
TMEM54-201ENST00000329151 ZDHHC15Q96MV8 337 aa29.08■■■□□ 2.25
TMEM54-201ENST00000329151 TEPSINQ96N21 525 aa29.08■■■□□ 2.25
TMEM54-201ENST00000329151 CT47B1P0C2W7 299 aaPredicted RBP29.07■■■□□ 2.24
TMEM54-201ENST00000329151 GTF2A2P52657 109 aa29.07■■■□□ 2.24
TMEM54-201ENST00000329151 CDCA7LQ96GN5 454 aa29.07■■■□□ 2.24
TMEM54-201ENST00000329151 MRIQ9BWK5 157 aa29.07■■■□□ 2.24
TMEM54-201ENST00000329151 API5Q9BZZ5 524 aaKnown RBP29.07■■■□□ 2.24
TMEM54-201ENST00000329151 SIL1Q9H173 461 aa29.07■■■□□ 2.24
TMEM54-201ENST00000329151 VGLL4Q14135 290 aa29.06■■■□□ 2.24
TMEM54-201ENST00000329151 ARHGEF6Q15052 776 aa29.06■■■□□ 2.24
TMEM54-201ENST00000329151 DCAF15Q66K64 600 aa29.06■■■□□ 2.24
TMEM54-201ENST00000329151 CDAN1Q8IWY9 1227 aa29.06■■■□□ 2.24
TMEM54-201ENST00000329151 OTUD5Q96G74 571 aa29.06■■■□□ 2.24
TMEM54-201ENST00000329151 CEP126Q9P2H0 1117 aa29.06■■■□□ 2.24
TMEM54-201ENST00000329151 CCL15-CCL14A0A0B4J2E2 113 aa29.05■■■□□ 2.24
TMEM54-201ENST00000329151 FGFR2P21802 821 aa29.05■■■□□ 2.24
TMEM54-201ENST00000329151 CCL15Q16663 113 aa29.05■■■□□ 2.24
TMEM54-201ENST00000329151 PPP1R3FQ6ZSY5 799 aaPredicted RBP29.05■■■□□ 2.24
TMEM54-201ENST00000329151 OTOP1Q7RTM1 612 aa29.05■■■□□ 2.24
TMEM54-201ENST00000329151 FAM83AQ86UY5 434 aa29.05■■■□□ 2.24
TMEM54-201ENST00000329151 FBXO3Q9UK99 471 aa29.05■■■□□ 2.24
TMEM54-201ENST00000329151 TESPA1A2RU30 521 aaPredicted RBP29.04■■■□□ 2.24
TMEM54-201ENST00000329151 SP3Q02447 781 aa29.04■■■□□ 2.24
TMEM54-201ENST00000329151 TAF1CQ15572 869 aaPredicted RBP29.04■■■□□ 2.24
TMEM54-201ENST00000329151 ATP2B3Q16720 1220 aa29.04■■■□□ 2.24
TMEM54-201ENST00000329151 FKBP1CQ5VVH2 108 aa29.04■■■□□ 2.24
TMEM54-201ENST00000329151 HHIPL2Q6UWX4 724 aa29.04■■■□□ 2.24
TMEM54-201ENST00000329151 DDX55Q8NHQ9 600 aaKnown RBP eCLIP29.04■■■□□ 2.24
TMEM54-201ENST00000329151 CD99L2Q8TCZ2 262 aa29.04■■■□□ 2.24
TMEM54-201ENST00000329151 WRNIP1Q96S55 665 aa29.04■■■□□ 2.24
TMEM54-201ENST00000329151 EFCC1Q9HA90 598 aa29.04■■■□□ 2.24
TMEM54-201ENST00000329151 ZFYVE28Q9HCC9 887 aa29.04■■■□□ 2.24
TMEM54-201ENST00000329151 NOB1Q9ULX3 412 aaKnown RBP29.03■■■□□ 2.24
TMEM54-201ENST00000329151 RFX5P48382 616 aaPredicted RBP29.02■■■□□ 2.24
TMEM54-201ENST00000329151 INTS3Q68E01 1043 aaKnown RBP29.02■■■□□ 2.24
TMEM54-201ENST00000329151 CIAO1O76071 339 aa29.01■■■□□ 2.23
TMEM54-201ENST00000329151 CNKSR2Q8WXI2 1034 aa29.01■■■□□ 2.23
TMEM54-201ENST00000329151 PTPN18Q99952 460 aa29.01■■■□□ 2.23
TMEM54-201ENST00000329151 APOBEC3HQ6NTF7 200 aaKnown RBP29■■■□□ 2.23
TMEM54-201ENST00000329151 ERO1BQ86YB8 467 aa29■■■□□ 2.23
TMEM54-201ENST00000329151 SPDYE5A6NIY4 337 aa28.99■■■□□ 2.23
TMEM54-201ENST00000329151 LDHBP07195 334 aaKnown RBP28.99■■■□□ 2.23
TMEM54-201ENST00000329151 CETPP11597 493 aa28.99■■■□□ 2.23
TMEM54-201ENST00000329151 IL15P40933 162 aaPredicted RBP28.99■■■□□ 2.23
TMEM54-201ENST00000329151 BRI3BPQ8WY22 251 aa28.99■■■□□ 2.23
TMEM54-201ENST00000329151 MS4A4AQ96JQ5 239 aa28.99■■■□□ 2.23
TMEM54-201ENST00000329151 ZNF341Q9BYN7 854 aa28.99■■■□□ 2.23
TMEM54-201ENST00000329151 LRRFIP2Q9Y608 721 aaKnown RBP28.99■■■□□ 2.23
TMEM54-201ENST00000329151 ATG9AQ7Z3C6 839 aa28.98■■■□□ 2.23
TMEM54-201ENST00000329151 DENND2AQ9ULE3 1009 aa28.98■■■□□ 2.23
TMEM54-201ENST00000329151 PTPN22Q9Y2R2 807 aa28.98■■■□□ 2.23
TMEM54-201ENST00000329151 RPAP1Q9BWH6 1393 aaPredicted RBP28.98■■■□□ 2.23
TMEM54-201ENST00000329151 SLC34A2O95436 690 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms