RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 MAP3K15Q6ZN16 1313 aa23.15■■□□□ 1.3
SOX2-201ENST00000325404 FGAP02671 866 aa23.15■■□□□ 1.3
SOX2-201ENST00000325404 FKBP4Q02790 459 aaKnown RBP eCLIP23.15■■□□□ 1.3
SOX2-201ENST00000325404 NCOA7Q8NI08 942 aa23.15■■□□□ 1.3
SOX2-201ENST00000325404 ZNF512BQ96KM6 892 aaPredicted RBP23.15■■□□□ 1.3
SOX2-201ENST00000325404 FAM98CQ17RN3 349 aaKnown RBP23.15■■□□□ 1.3
SOX2-201ENST00000325404 C8orf76Q96K31 380 aa23.15■■□□□ 1.3
SOX2-201ENST00000325404 ZBTB1Q9Y2K1 713 aa23.15■■□□□ 1.3
SOX2-201ENST00000325404 PRC1O43663 620 aa23.14■■□□□ 1.3
SOX2-201ENST00000325404 TSC1Q92574 1164 aa23.14■■□□□ 1.3
SOX2-201ENST00000325404 NAP1L2Q9ULW6 460 aaPredicted RBP23.14■■□□□ 1.3
SOX2-201ENST00000325404 HPS5Q9UPZ3 1129 aa23.14■■□□□ 1.3
SOX2-201ENST00000325404 SPATA31A6Q5VVP1 1343 aa23.14■■□□□ 1.29
SOX2-201ENST00000325404 DHX8Q14562 1220 aaKnown RBP23.14■■□□□ 1.29
SOX2-201ENST00000325404 TNNT1P13805 278 aa23.13■■□□□ 1.29
SOX2-201ENST00000325404 WASHC4Q2M389 1173 aa23.13■■□□□ 1.29
SOX2-201ENST00000325404 CHST3Q7LGC8 479 aa23.13■■□□□ 1.29
SOX2-201ENST00000325404 FOSBP53539 338 aa23.13■■□□□ 1.29
SOX2-201ENST00000325404 GIGYF2Q6Y7W6 1299 aaKnown RBP23.13■■□□□ 1.29
SOX2-201ENST00000325404 FNBP4Q8N3X1 1017 aaPredicted RBP23.13■■□□□ 1.29
SOX2-201ENST00000325404 IMPACTQ9P2X3 320 aa23.13■■□□□ 1.29
SOX2-201ENST00000325404 CDHR2Q9BYE9 1310 aa23.12■■□□□ 1.29
SOX2-201ENST00000325404 GSDMDP57764 484 aa23.12■■□□□ 1.29
SOX2-201ENST00000325404 ZBTB38Q8NAP3 1195 aaPredicted RBP23.12■■□□□ 1.29
SOX2-201ENST00000325404 KLF18A0A0U1RQI7 1052 aa23.12■■□□□ 1.29
SOX2-201ENST00000325404 ADORA1P30542 326 aa23.12■■□□□ 1.29
SOX2-201ENST00000325404 GUCY1B3Q02153 619 aa23.12■■□□□ 1.29
SOX2-201ENST00000325404 STK38Q15208 465 aa23.12■■□□□ 1.29
SOX2-201ENST00000325404 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.12■■□□□ 1.29
SOX2-201ENST00000325404 KIAA1468Q9P260 1216 aa23.12■■□□□ 1.29
SOX2-201ENST00000325404 ORC3Q9UBD5 711 aaPredicted RBP23.12■■□□□ 1.29
SOX2-201ENST00000325404 ATRNO75882 1429 aa23.11■■□□□ 1.29
SOX2-201ENST00000325404 IL6STP40189 918 aaPredicted RBP23.11■■□□□ 1.29
SOX2-201ENST00000325404 MYSM1Q5VVJ2 828 aa23.11■■□□□ 1.29
SOX2-201ENST00000325404 SDF4Q9BRK5 362 aa23.11■■□□□ 1.29
SOX2-201ENST00000325404 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.11■■□□□ 1.29
SOX2-201ENST00000325404 ZNF213O14771 459 aa23.11■■□□□ 1.29
SOX2-201ENST00000325404 SPTLC2O15270 562 aa23.11■■□□□ 1.29
SOX2-201ENST00000325404 IFIT5Q13325 482 aaKnown RBP23.11■■□□□ 1.29
SOX2-201ENST00000325404 TPD52L1Q16890 204 aaPredicted RBP23.11■■□□□ 1.29
SOX2-201ENST00000325404 HSP90AB3PQ58FF7 597 aa23.11■■□□□ 1.29
SOX2-201ENST00000325404 RALYLQ86SE5 291 aaKnown RBP23.11■■□□□ 1.29
SOX2-201ENST00000325404 PDCL2Q8N4E4 241 aa23.11■■□□□ 1.29
SOX2-201ENST00000325404 CERKQ8TCT0 537 aa23.11■■□□□ 1.29
SOX2-201ENST00000325404 OSBPL5Q9H0X9 879 aaPredicted RBP23.11■■□□□ 1.29
SOX2-201ENST00000325404 GOLGA8BA8MQT2 603 aa23.1■■□□□ 1.29
SOX2-201ENST00000325404 ANTXR2P58335 489 aa23.1■■□□□ 1.29
SOX2-201ENST00000325404 SF3A1Q15459 793 aaKnown RBP23.1■■□□□ 1.29
SOX2-201ENST00000325404 C16orf45Q96MC5 204 aaPredicted RBP23.1■■□□□ 1.29
SOX2-201ENST00000325404 ZAP70P43403 619 aa23.09■■□□□ 1.29
SOX2-201ENST00000325404 NDUFA8P51970 172 aa23.09■■□□□ 1.29
SOX2-201ENST00000325404 PUS7LQ9H0K6 701 aaKnown RBP23.09■■□□□ 1.29
SOX2-201ENST00000325404 LOC102724428A0A0B4J2F2 783 aa23.09■■□□□ 1.29
SOX2-201ENST00000325404 CPLX1O14810 134 aa23.09■■□□□ 1.29
SOX2-201ENST00000325404 CMA1P23946 247 aa23.09■■□□□ 1.29
SOX2-201ENST00000325404 ATP6V1AP38606 617 aa23.09■■□□□ 1.29
SOX2-201ENST00000325404 SIK1P57059 783 aa23.09■■□□□ 1.29
SOX2-201ENST00000325404 TTF1Q15361 905 aaPredicted RBP23.09■■□□□ 1.29
SOX2-201ENST00000325404 TAF7LQ5H9L4 462 aa23.09■■□□□ 1.29
SOX2-201ENST00000325404 TIGD1Q96MW7 591 aa23.09■■□□□ 1.29
SOX2-201ENST00000325404 GPHNQ9NQX3 736 aaPredicted RBP23.09■■□□□ 1.29
SOX2-201ENST00000325404 RIPOR2Q9Y4F9 1068 aa23.09■■□□□ 1.29
SOX2-201ENST00000325404 CLIC4Q9Y696 253 aa23.09■■□□□ 1.29
SOX2-201ENST00000325404 MYH7P12883 1935 aa23.08■■□□□ 1.29
SOX2-201ENST00000325404 GPAA1O43292 621 aa23.08■■□□□ 1.29
SOX2-201ENST00000325404 SYNE3Q6ZMZ3 975 aa23.08■■□□□ 1.29
SOX2-201ENST00000325404 USP21Q9UK80 565 aa23.08■■□□□ 1.29
SOX2-201ENST00000325404 RIC1Q4ADV7 1423 aa23.08■■□□□ 1.28
SOX2-201ENST00000325404 SCARF1Q14162 830 aa23.08■■□□□ 1.28
SOX2-201ENST00000325404 HLFQ16534 295 aa23.08■■□□□ 1.28
SOX2-201ENST00000325404 NYAP1Q6ZVC0 841 aa23.08■■□□□ 1.28
SOX2-201ENST00000325404 AOPEPQ8N6M6 819 aa23.08■■□□□ 1.28
SOX2-201ENST00000325404 SMARCC1Q92922 1105 aaPredicted RBP23.08■■□□□ 1.28
SOX2-201ENST00000325404 NEDD4P46934 1319 aa23.08■■□□□ 1.28
SOX2-201ENST00000325404 A0A1B0GVL5 298 aa23.07■■□□□ 1.28
SOX2-201ENST00000325404 SKILP12757 684 aa23.07■■□□□ 1.28
SOX2-201ENST00000325404 HAND2P61296 217 aa23.07■■□□□ 1.28
SOX2-201ENST00000325404 KIF23Q02241 960 aaPredicted RBP23.07■■□□□ 1.28
SOX2-201ENST00000325404 ATP2B3Q16720 1220 aa23.07■■□□□ 1.28
SOX2-201ENST00000325404 ANO1Q5XXA6 986 aa23.07■■□□□ 1.28
SOX2-201ENST00000325404 CCDC112Q8NEF3 446 aa23.07■■□□□ 1.28
SOX2-201ENST00000325404 CCDC69A6NI79 296 aa23.07■■□□□ 1.28
SOX2-201ENST00000325404 KIF2AO00139 706 aaPredicted RBP23.07■■□□□ 1.28
SOX2-201ENST00000325404 CDKL5O76039 1030 aa23.07■■□□□ 1.28
SOX2-201ENST00000325404 CCZ1BP86790 482 aa23.07■■□□□ 1.28
SOX2-201ENST00000325404 CCZ1P86791 482 aaPredicted RBP23.07■■□□□ 1.28
SOX2-201ENST00000325404 ZRSR1Q15695 479 aaKnown RBP23.07■■□□□ 1.28
SOX2-201ENST00000325404 CEP135Q66GS9 1140 aa23.07■■□□□ 1.28
SOX2-201ENST00000325404 DZIP3Q86Y13 1208 aaKnown RBP23.07■■□□□ 1.28
SOX2-201ENST00000325404 CCDC87Q9NVE4 849 aa23.07■■□□□ 1.28
SOX2-201ENST00000325404 ZMYM6O95789 1325 aa23.07■■□□□ 1.28
SOX2-201ENST00000325404 ERVV-1B6SEH8 477 aa23.06■■□□□ 1.28
SOX2-201ENST00000325404 ADD2P35612 726 aa23.06■■□□□ 1.28
SOX2-201ENST00000325404 NLRP12P59046 1061 aa23.06■■□□□ 1.28
SOX2-201ENST00000325404 TRDNQ13061 729 aa23.06■■□□□ 1.28
SOX2-201ENST00000325404 UBE3CQ15386 1083 aa23.06■■□□□ 1.28
SOX2-201ENST00000325404 PPP4R3BQ5MIZ7 849 aa23.06■■□□□ 1.28
SOX2-201ENST00000325404 AXDND1Q5T1B0 1012 aaPredicted RBP23.06■■□□□ 1.28
SOX2-201ENST00000325404 KCNJ6P48051 423 aa23.06■■□□□ 1.28
SOX2-201ENST00000325404 C4AP0C0L4 1744 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms