RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 ZFYP08048 801 aaPredicted RBP18.39■□□□□ 0.53
PRPF3-201ENST00000324862 NAA16Q6N069 864 aaPredicted RBP18.39■□□□□ 0.53
PRPF3-201ENST00000324862 GPAA1O43292 621 aa18.38■□□□□ 0.53
PRPF3-201ENST00000324862 DYNLL1P63167 89 aaKnown RBP18.38■□□□□ 0.53
PRPF3-201ENST00000324862 DACT2Q5SW24 774 aa18.38■□□□□ 0.53
PRPF3-201ENST00000324862 DZIP1Q86YF9 867 aaKnown RBP18.38■□□□□ 0.53
PRPF3-201ENST00000324862 C22orf23Q9BZE7 217 aa18.38■□□□□ 0.53
PRPF3-201ENST00000324862 ARMT1Q9H993 441 aa18.38■□□□□ 0.53
PRPF3-201ENST00000324862 HELLSQ9NRZ9 838 aa18.38■□□□□ 0.53
PRPF3-201ENST00000324862 RBM19Q9Y4C8 960 aaKnown RBP18.38■□□□□ 0.53
PRPF3-201ENST00000324862 DOCK2Q92608 1830 aa18.38■□□□□ 0.53
PRPF3-201ENST00000324862 FOXP2O15409 715 aa18.38■□□□□ 0.53
PRPF3-201ENST00000324862 ZSCAN25Q6NSZ9 544 aa18.38■□□□□ 0.53
PRPF3-201ENST00000324862 KIAA0825Q8IV33 1275 aa18.38■□□□□ 0.53
PRPF3-201ENST00000324862 LCORLQ8N3X6 602 aa18.38■□□□□ 0.53
PRPF3-201ENST00000324862 ZBTB12Q9Y330 459 aaPredicted RBP18.38■□□□□ 0.53
PRPF3-201ENST00000324862 CCDC171Q6TFL3 1326 aa18.38■□□□□ 0.53
PRPF3-201ENST00000324862 USP17L3A6NCW0 530 aa18.37■□□□□ 0.53
PRPF3-201ENST00000324862 USP17L4A6NCW7 530 aa18.37■□□□□ 0.53
PRPF3-201ENST00000324862 REC8O95072 547 aa18.37■□□□□ 0.53
PRPF3-201ENST00000324862 MBD4O95243 580 aa18.37■□□□□ 0.53
PRPF3-201ENST00000324862 SCNN1DP51172 638 aa18.37■□□□□ 0.53
PRPF3-201ENST00000324862 USP17L1Q7RTZ2 530 aa18.37■□□□□ 0.53
PRPF3-201ENST00000324862 NIM1KQ8IY84 436 aa18.37■□□□□ 0.53
PRPF3-201ENST00000324862 PCDHAC2Q9Y5I4 1007 aa18.37■□□□□ 0.53
PRPF3-201ENST00000324862 ZBTB22O15209 634 aa18.37■□□□□ 0.53
PRPF3-201ENST00000324862 PRKAB2O43741 272 aa18.37■□□□□ 0.53
PRPF3-201ENST00000324862 AATFQ9NY61 560 aaKnown RBP eCLIP18.37■□□□□ 0.53
PRPF3-201ENST00000324862 PSMD14O00487 310 aa18.36■□□□□ 0.53
PRPF3-201ENST00000324862 LRRFIP1Q32MZ4 808 aaKnown RBP18.36■□□□□ 0.53
PRPF3-201ENST00000324862 STRIP1Q5VSL9 837 aa18.36■□□□□ 0.53
PRPF3-201ENST00000324862 PALD1Q9ULE6 856 aa18.36■□□□□ 0.53
PRPF3-201ENST00000324862 RAD50Q92878 1312 aa18.36■□□□□ 0.53
PRPF3-201ENST00000324862 KIAA1211Q6ZU35 1233 aa18.35■□□□□ 0.53
PRPF3-201ENST00000324862 ZGPATQ8N5A5 531 aaKnown RBP18.35■□□□□ 0.53
PRPF3-201ENST00000324862 AIDAQ96BJ3 306 aa18.35■□□□□ 0.53
PRPF3-201ENST00000324862 TBC1D32Q96NH3 1257 aa18.35■□□□□ 0.53
PRPF3-201ENST00000324862 UPF2Q9HAU5 1272 aaKnown RBP18.35■□□□□ 0.53
PRPF3-201ENST00000324862 ZNRF3Q9ULT6 936 aa18.35■□□□□ 0.53
PRPF3-201ENST00000324862 TTF2Q9UNY4 1162 aaKnown RBP18.35■□□□□ 0.53
PRPF3-201ENST00000324862 CXCL9Q07325 125 aa18.35■□□□□ 0.53
PRPF3-201ENST00000324862 TBC1D22AQ8WUA7 517 aa18.35■□□□□ 0.53
PRPF3-201ENST00000324862 JDP2Q8WYK2 163 aa18.35■□□□□ 0.53
PRPF3-201ENST00000324862 TAF6LQ9Y6J9 622 aa18.35■□□□□ 0.53
PRPF3-201ENST00000324862 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
PRPF3-201ENST00000324862 HSPD1P10809 573 aaKnown RBP18.34■□□□□ 0.53
PRPF3-201ENST00000324862 SPTY2D1Q68D10 685 aaPredicted RBP18.34■□□□□ 0.53
PRPF3-201ENST00000324862 RIOK1Q9BRS2 568 aaKnown RBP18.34■□□□□ 0.53
PRPF3-201ENST00000324862 LTBP3Q9NS15 1303 aa18.34■□□□□ 0.53
PRPF3-201ENST00000324862 STRBPQ96SI9 672 aaKnown RBP18.34■□□□□ 0.53
PRPF3-201ENST00000324862 MYH7P12883 1935 aa18.34■□□□□ 0.53
PRPF3-201ENST00000324862 SDR42E1Q8WUS8 393 aa18.33■□□□□ 0.53
PRPF3-201ENST00000324862 GPR162Q16538 588 aa18.33■□□□□ 0.52
PRPF3-201ENST00000324862 MAP4K1Q92918 833 aa18.33■□□□□ 0.52
PRPF3-201ENST00000324862 RBM8AQ9Y5S9 174 aaKnown RBP18.33■□□□□ 0.52
PRPF3-201ENST00000324862 MAGEB6P1A0A0J9YX57 407 aa18.32■□□□□ 0.52
PRPF3-201ENST00000324862 VPS33BQ9H267 617 aa18.32■□□□□ 0.52
PRPF3-201ENST00000324862 SHTN1A0MZ66 631 aa18.32■□□□□ 0.52
PRPF3-201ENST00000324862 RASEFQ8IZ41 740 aa18.32■□□□□ 0.52
PRPF3-201ENST00000324862 KIF2CQ99661 725 aa18.32■□□□□ 0.52
PRPF3-201ENST00000324862 COL9A3Q14050 684 aaPredicted RBP18.31■□□□□ 0.52
PRPF3-201ENST00000324862 TICAM2Q86XR7 235 aa18.31■□□□□ 0.52
PRPF3-201ENST00000324862 APPP05067 770 aa18.31■□□□□ 0.52
PRPF3-201ENST00000324862 EPB41L4AQ9HCS5 686 aaPredicted RBP18.31■□□□□ 0.52
PRPF3-201ENST00000324862 ZNF646O15015 1829 aaPredicted RBP18.31■□□□□ 0.52
PRPF3-201ENST00000324862 MROH7-TTC4A0A0A0MT08 1334 aa18.3■□□□□ 0.52
PRPF3-201ENST00000324862 ZNF541Q9H0D2 1346 aa18.3■□□□□ 0.52
PRPF3-201ENST00000324862 SMIM22K7EJ46 135 aa18.3■□□□□ 0.52
PRPF3-201ENST00000324862 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
PRPF3-201ENST00000324862 BTDP43251 543 aa18.3■□□□□ 0.52
PRPF3-201ENST00000324862 RBM25P49756 843 aaKnown RBP18.3■□□□□ 0.52
PRPF3-201ENST00000324862 RSBN1LQ6PCB5 846 aaPredicted RBP18.3■□□□□ 0.52
PRPF3-201ENST00000324862 DAGLAQ9Y4D2 1042 aa18.3■□□□□ 0.52
PRPF3-201ENST00000324862 SLC4A4Q9Y6R1 1079 aa18.3■□□□□ 0.52
PRPF3-201ENST00000324862 ADAMTSL1Q8N6G6 1762 aa18.3■□□□□ 0.52
PRPF3-201ENST00000324862 NECTIN1Q15223 517 aa18.3■□□□□ 0.52
PRPF3-201ENST00000324862 SH3RF3Q8TEJ3 882 aaPredicted RBP18.3■□□□□ 0.52
PRPF3-201ENST00000324862 GSG1L2A8MUP6 293 aa18.29■□□□□ 0.52
PRPF3-201ENST00000324862 FGAP02671 866 aa18.29■□□□□ 0.52
PRPF3-201ENST00000324862 LMNB1P20700 586 aa18.29■□□□□ 0.52
PRPF3-201ENST00000324862 HSPA4P34932 840 aa18.29■□□□□ 0.52
PRPF3-201ENST00000324862 EVX2Q03828 476 aa18.29■□□□□ 0.52
PRPF3-201ENST00000324862 SLC4A8Q2Y0W8 1093 aa18.29■□□□□ 0.52
PRPF3-201ENST00000324862 GJA3Q9Y6H8 435 aa18.29■□□□□ 0.52
PRPF3-201ENST00000324862 FZD9O00144 591 aa18.29■□□□□ 0.52
PRPF3-201ENST00000324862 HAND2P61296 217 aa18.29■□□□□ 0.52
PRPF3-201ENST00000324862 CIAPIN1Q6FI81 312 aa18.29■□□□□ 0.52
PRPF3-201ENST00000324862 GMLQ99445 158 aa18.28■□□□□ 0.52
PRPF3-201ENST00000324862 RNF181Q9P0P0 153 aa18.28■□□□□ 0.52
PRPF3-201ENST00000324862 CRKP46108 304 aa18.28■□□□□ 0.52
PRPF3-201ENST00000324862 RBM5P52756 815 aaKnown RBP eCLIP18.28■□□□□ 0.52
PRPF3-201ENST00000324862 CREB3L3Q68CJ9 461 aa18.28■□□□□ 0.52
PRPF3-201ENST00000324862 DSCC1Q9BVC3 393 aa18.28■□□□□ 0.52
PRPF3-201ENST00000324862 SLC27A2O14975 620 aa18.27■□□□□ 0.52
PRPF3-201ENST00000324862 CYP21A2P08686 494 aa18.27■□□□□ 0.52
PRPF3-201ENST00000324862 GSTO1P78417 241 aa18.27■□□□□ 0.52
PRPF3-201ENST00000324862 ADCK5Q3MIX3 580 aa18.27■□□□□ 0.52
PRPF3-201ENST00000324862 SUGT1Q9Y2Z0 365 aa18.27■□□□□ 0.52
PRPF3-201ENST00000324862 GAKO14976 1311 aa18.27■□□□□ 0.52
PRPF3-201ENST00000324862 CCDC88AQ3V6T2 1871 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms