RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 GOLGA8BA8MQT2 603 aa18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 ZNF213O14771 459 aa18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 PFKFB2O60825 505 aa18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 EXOSC10Q01780 885 aaKnown RBP18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 SCAND2PQ9GZW5 306 aaPredicted RBP18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 ERICH4A6NGS2 130 aa18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 APPBP2Q92624 585 aa18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 TOMM22Q9NS69 142 aa18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 PAXBP1Q9Y5B6 917 aa18.12■□□□□ 0.49
SHROOM1-201ENST00000319854 TOGARAM1Q9Y4F4 1720 aa18.11■□□□□ 0.49
SHROOM1-201ENST00000319854 RESTQ13127 1097 aa18.11■□□□□ 0.49
SHROOM1-201ENST00000319854 CEP135Q66GS9 1140 aa18.11■□□□□ 0.49
SHROOM1-201ENST00000319854 WTIPA6NIX2 430 aaPredicted RBP18.11■□□□□ 0.49
SHROOM1-201ENST00000319854 PDE8BO95263 885 aa18.11■□□□□ 0.49
SHROOM1-201ENST00000319854 CRKLP46109 303 aaKnown RBP18.11■□□□□ 0.49
SHROOM1-201ENST00000319854 RBM6P78332 1123 aaKnown RBP18.11■□□□□ 0.49
SHROOM1-201ENST00000319854 CCDC24Q8N4L8 307 aa18.11■□□□□ 0.49
SHROOM1-201ENST00000319854 TJP1Q07157 1748 aa18.11■□□□□ 0.49
SHROOM1-201ENST00000319854 ZNF532Q9HCE3 1301 aa18.1■□□□□ 0.49
SHROOM1-201ENST00000319854 ABCC6O95255 1503 aa18.1■□□□□ 0.49
SHROOM1-201ENST00000319854 PDE8AO60658 829 aa18.1■□□□□ 0.49
SHROOM1-201ENST00000319854 KRT222Q8N1A0 295 aa18.1■□□□□ 0.49
SHROOM1-201ENST00000319854 BCL9O00512 1426 aa18.1■□□□□ 0.49
SHROOM1-201ENST00000319854 CPLX1O14810 134 aa18.1■□□□□ 0.49
SHROOM1-201ENST00000319854 ALDH8A1Q9H2A2 487 aaPredicted RBP18.1■□□□□ 0.49
SHROOM1-201ENST00000319854 NIP7Q9Y221 180 aaKnown RBP eCLIP18.1■□□□□ 0.49
SHROOM1-201ENST00000319854 FBXO38Q6PIJ6 1188 aa18.1■□□□□ 0.49
SHROOM1-201ENST00000319854 MYL10Q9BUA6 226 aa18.1■□□□□ 0.49
SHROOM1-201ENST00000319854 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.1■□□□□ 0.49
SHROOM1-201ENST00000319854 CLIP2Q9UDT6 1046 aa18.1■□□□□ 0.49
SHROOM1-201ENST00000319854 LRRFIP1Q32MZ4 808 aaKnown RBP18.09■□□□□ 0.49
SHROOM1-201ENST00000319854 RRP12Q5JTH9 1297 aaKnown RBP18.09■□□□□ 0.49
SHROOM1-201ENST00000319854 USP28Q96RU2 1077 aa18.09■□□□□ 0.49
SHROOM1-201ENST00000319854 DNAJC25Q9H1X3 360 aa18.09■□□□□ 0.49
SHROOM1-201ENST00000319854 NPHP1O15259 732 aa18.09■□□□□ 0.49
SHROOM1-201ENST00000319854 ME1P48163 572 aa18.09■□□□□ 0.49
SHROOM1-201ENST00000319854 RIC1Q4ADV7 1423 aa18.08■□□□□ 0.49
SHROOM1-201ENST00000319854 FAM182BQ5T319 152 aa18.08■□□□□ 0.49
SHROOM1-201ENST00000319854 FAM53CQ9NYF3 392 aa18.08■□□□□ 0.49
SHROOM1-201ENST00000319854 RFX7Q2KHR2 1363 aa18.08■□□□□ 0.49
SHROOM1-201ENST00000319854 NUP188Q5SRE5 1749 aa18.08■□□□□ 0.49
SHROOM1-201ENST00000319854 B4E1Z4 1266 aa18.08■□□□□ 0.48
SHROOM1-201ENST00000319854 BCAMP50895 628 aa18.08■□□□□ 0.48
SHROOM1-201ENST00000319854 ITPK1Q13572 414 aa18.08■□□□□ 0.48
SHROOM1-201ENST00000319854 ELF2Q15723 593 aa18.08■□□□□ 0.48
SHROOM1-201ENST00000319854 MAGEB6Q8N7X4 407 aa18.08■□□□□ 0.48
SHROOM1-201ENST00000319854 MIGA1Q8NAN2 632 aa18.08■□□□□ 0.48
SHROOM1-201ENST00000319854 AIDAQ96BJ3 306 aa18.08■□□□□ 0.48
SHROOM1-201ENST00000319854 AIFM3Q96NN9 605 aa18.08■□□□□ 0.48
SHROOM1-201ENST00000319854 SENP2Q9HC62 589 aa18.08■□□□□ 0.48
SHROOM1-201ENST00000319854 LOC102724428A0A0B4J2F2 783 aa18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 SIK1P57059 783 aa18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 MARCH10Q8NA82 808 aaPredicted RBP18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 PLA2G12BQ9BX93 195 aa18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 UBR2Q8IWV8 1755 aa18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 ZFYP08048 801 aaPredicted RBP18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 TRDNQ13061 729 aa18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 MICU3Q86XE3 530 aa18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 CCDC82Q8N4S0 544 aa18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 ZNF397Q8NF99 534 aaPredicted RBP18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 SHANK3Q9BYB0 1731 aa18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 PDE6AP16499 860 aa18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 IL6STP40189 918 aaPredicted RBP18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 TBC1D10CQ8IV04 446 aa18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 TDRD7Q8NHU6 1098 aaKnown RBP18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 CCDC87Q9NVE4 849 aa18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 ZNF446Q9NWS9 450 aa18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 TRMT1Q9NXH9 659 aaKnown RBP18.07■□□□□ 0.48
SHROOM1-201ENST00000319854 PLEKHG2Q9H7P9 1386 aa18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 ANTXR2P58335 489 aa18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 NCOA7Q8NI08 942 aa18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 SMARCC2Q8TAQ2 1214 aa18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 ARMT1Q9H993 441 aa18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 FDPSP14324 419 aaKnown RBP18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 ADD1P35611 737 aaKnown RBP18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 ADD2P35612 726 aa18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 ZNF165P49910 485 aa18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 CTDSPL2Q05D32 466 aa18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 INTS5Q6P9B9 1019 aaKnown RBP18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 LRRC8AQ8IWT6 810 aa18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 ZKSCAN3Q9BRR0 538 aa18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 ORC3Q9UBD5 711 aaPredicted RBP18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 ABCF2Q9UG63 623 aa18.06■□□□□ 0.48
SHROOM1-201ENST00000319854 PRKAB2O43741 272 aa18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 RASGRF1Q13972 1273 aa18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 KLHL34Q8N239 644 aa18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 CAPN2P17655 700 aa18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 NFXL1Q6ZNB6 911 aa18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 CCAR1Q8IX12 1150 aaKnown RBP18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 VGLL2Q8N8G2 317 aa18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 PHKBQ93100 1093 aa18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 TRERF1Q96PN7 1200 aa18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 UTP14AQ9BVJ6 771 aaKnown RBP18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 CFAP45Q9UL16 551 aa18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 UBE2Q2LH0YL09 131 aa18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 MBD4O95243 580 aa18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 PUM3Q15397 648 aaKnown RBP18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 FAM98CQ17RN3 349 aaKnown RBP18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 CDHR2Q9BYE9 1310 aa18.05■□□□□ 0.48
SHROOM1-201ENST00000319854 CYB5R4Q7L1T6 521 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms