RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 OSBP2Q969R2 916 aa32.97■■■□□ 2.87
CTDNEP1-201ENST00000318988 YDJCA8MPS7 323 aa32.96■■■□□ 2.87
CTDNEP1-201ENST00000318988 FKBP1AP62942 108 aaKnown RBP32.96■■■□□ 2.87
CTDNEP1-201ENST00000318988 SLF2Q8IX21 1173 aa32.96■■■□□ 2.87
CTDNEP1-201ENST00000318988 IL25Q9H293 177 aa32.96■■■□□ 2.87
CTDNEP1-201ENST00000318988 MAST3O60307 1309 aa32.95■■■□□ 2.87
CTDNEP1-201ENST00000318988 MYH7P12883 1935 aa32.95■■■□□ 2.87
CTDNEP1-201ENST00000318988 CCDC171Q6TFL3 1326 aa32.94■■■□□ 2.86
CTDNEP1-201ENST00000318988 LDHCP07864 332 aa32.94■■■□□ 2.86
CTDNEP1-201ENST00000318988 YBX3P16989 372 aaKnown RBP eCLIP32.94■■■□□ 2.861e-6■■□□□ 13.3
CTDNEP1-201ENST00000318988 GPR162Q16538 588 aa32.94■■■□□ 2.86
CTDNEP1-201ENST00000318988 DACT2Q5SW24 774 aa32.94■■■□□ 2.86
CTDNEP1-201ENST00000318988 AIDAQ96BJ3 306 aa32.94■■■□□ 2.86
CTDNEP1-201ENST00000318988 PUS7LQ9H0K6 701 aaKnown RBP32.94■■■□□ 2.86
CTDNEP1-201ENST00000318988 MYO5AQ9Y4I1 1855 aaKnown RBP32.93■■■□□ 2.86
CTDNEP1-201ENST00000318988 M0R2C6 588 aa32.93■■■□□ 2.86
CTDNEP1-201ENST00000318988 CCDC129Q6ZRS4 1044 aa32.93■■■□□ 2.86
CTDNEP1-201ENST00000318988 ZNF589Q86UQ0 364 aaPredicted RBP32.93■■■□□ 2.86
CTDNEP1-201ENST00000318988 CHD4Q14839 1912 aa32.93■■■□□ 2.86
CTDNEP1-201ENST00000318988 RAD17O75943 681 aa32.92■■■□□ 2.86
CTDNEP1-201ENST00000318988 LMNB1P20700 586 aa32.92■■■□□ 2.86
CTDNEP1-201ENST00000318988 GRIK5Q16478 980 aa32.92■■■□□ 2.86
CTDNEP1-201ENST00000318988 MXD3Q9BW11 206 aa32.92■■■□□ 2.86
CTDNEP1-201ENST00000318988 CERS5Q8N5B7 392 aa32.91■■■□□ 2.86
CTDNEP1-201ENST00000318988 NOL10Q9BSC4 688 aaKnown RBP32.91■■■□□ 2.86
CTDNEP1-201ENST00000318988 GOLGB1Q14789 3259 aaKnown RBP32.91■■■□□ 2.86
CTDNEP1-201ENST00000318988 F8W031 263 aaPredicted RBP32.9■■■□□ 2.86
CTDNEP1-201ENST00000318988 GPAA1O43292 621 aa32.9■■■□□ 2.86
CTDNEP1-201ENST00000318988 EPB41L2O43491 1005 aaKnown RBP32.9■■■□□ 2.86
CTDNEP1-201ENST00000318988 USP26Q9BXU7 913 aa32.9■■■□□ 2.86
CTDNEP1-201ENST00000318988 TTF2Q9UNY4 1162 aaKnown RBP32.9■■■□□ 2.86
CTDNEP1-201ENST00000318988 MYO3BQ8WXR4 1341 aa32.9■■■□□ 2.86
CTDNEP1-201ENST00000318988 COL4A5P29400 1685 aa32.9■■■□□ 2.86
CTDNEP1-201ENST00000318988 MAGEB6P1A0A0J9YX57 407 aa32.89■■■□□ 2.86
CTDNEP1-201ENST00000318988 MIGA1Q8NAN2 632 aa32.89■■■□□ 2.86
CTDNEP1-201ENST00000318988 C22orf23Q9BZE7 217 aa32.89■■■□□ 2.86
CTDNEP1-201ENST00000318988 MBD4O95243 580 aa32.88■■■□□ 2.85
CTDNEP1-201ENST00000318988 MCCP23508 829 aa32.88■■■□□ 2.85
CTDNEP1-201ENST00000318988 EIF6P56537 245 aaKnown RBP32.88■■■□□ 2.85
CTDNEP1-201ENST00000318988 TNIP1Q15025 636 aa32.88■■■□□ 2.85
CTDNEP1-201ENST00000318988 CIAPIN1Q6FI81 312 aa32.88■■■□□ 2.85
CTDNEP1-201ENST00000318988 ZNF384Q8TF68 577 aa32.88■■■□□ 2.85
CTDNEP1-201ENST00000318988 LSG1Q9H089 658 aaKnown RBP32.88■■■□□ 2.85
CTDNEP1-201ENST00000318988 MAST2Q6P0Q8 1798 aa32.88■■■□□ 2.85
CTDNEP1-201ENST00000318988 PSMD14O00487 310 aa32.87■■■□□ 2.85
CTDNEP1-201ENST00000318988 RSBN1LQ6PCB5 846 aaPredicted RBP32.87■■■□□ 2.85
CTDNEP1-201ENST00000318988 CCDC88AQ3V6T2 1871 aa32.87■■■□□ 2.85
CTDNEP1-201ENST00000318988 VIL1P09327 827 aaKnown RBP32.87■■■□□ 2.85
CTDNEP1-201ENST00000318988 CXCL9Q07325 125 aa32.87■■■□□ 2.85
CTDNEP1-201ENST00000318988 DIXDC1Q155Q3 683 aa32.87■■■□□ 2.85
CTDNEP1-201ENST00000318988 ADGRA1Q86SQ6 560 aa32.87■■■□□ 2.85
CTDNEP1-201ENST00000318988 TSHZ2Q9NRE2 1034 aa32.87■■■□□ 2.85
CTDNEP1-201ENST00000318988 SCN9AQ15858 1988 aa32.86■■■□□ 2.85
CTDNEP1-201ENST00000318988 GRIN3BO60391 1043 aa32.86■■■□□ 2.85
CTDNEP1-201ENST00000318988 BAG3O95817 575 aa32.86■■■□□ 2.85
CTDNEP1-201ENST00000318988 KIAA0825Q8IV33 1275 aa32.86■■■□□ 2.85
CTDNEP1-201ENST00000318988 ARMT1Q9H993 441 aa32.86■■■□□ 2.85
CTDNEP1-201ENST00000318988 PRELPP51888 382 aa32.85■■■□□ 2.85
CTDNEP1-201ENST00000318988 PTH1RQ03431 593 aa32.85■■■□□ 2.85
CTDNEP1-201ENST00000318988 MROH7-TTC4A0A0A0MT08 1334 aa32.85■■■□□ 2.85
CTDNEP1-201ENST00000318988 GNAT2P19087 354 aa32.84■■■□□ 2.85
CTDNEP1-201ENST00000318988 STRBPQ96SI9 672 aaKnown RBP32.84■■■□□ 2.85
CTDNEP1-201ENST00000318988 CERS3Q8IU89 383 aa32.83■■■□□ 2.85
CTDNEP1-201ENST00000318988 TEKT1Q969V4 418 aa32.83■■■□□ 2.85
CTDNEP1-201ENST00000318988 FAM163AQ96GL9 167 aaPredicted RBP32.83■■■□□ 2.85
CTDNEP1-201ENST00000318988 DSCC1Q9BVC3 393 aa32.83■■■□□ 2.85
CTDNEP1-201ENST00000318988 AATFQ9NY61 560 aaKnown RBP eCLIP32.83■■■□□ 2.85
CTDNEP1-201ENST00000318988 FZD9O00144 591 aa32.82■■■□□ 2.85
CTDNEP1-201ENST00000318988 HSPD1P10809 573 aaKnown RBP32.82■■■□□ 2.85
CTDNEP1-201ENST00000318988 SCNN1DP51172 638 aa32.82■■■□□ 2.85
CTDNEP1-201ENST00000318988 LCORLQ8N3X6 602 aa32.82■■■□□ 2.85
CTDNEP1-201ENST00000318988 MAP4K1Q92918 833 aa32.82■■■□□ 2.85
CTDNEP1-201ENST00000318988 TBC1D32Q96NH3 1257 aa32.82■■■□□ 2.85
CTDNEP1-201ENST00000318988 APPP05067 770 aa32.82■■■□□ 2.84
CTDNEP1-201ENST00000318988 AGBL3Q8NEM8 1001 aa32.82■■■□□ 2.84
CTDNEP1-201ENST00000318988 HDAC9Q9UKV0 1011 aa32.82■■■□□ 2.84
CTDNEP1-201ENST00000318988 U3KPZ7 1027 aaPredicted RBP32.82■■■□□ 2.84
CTDNEP1-201ENST00000318988 DYNLL1P63167 89 aaKnown RBP32.81■■■□□ 2.84
CTDNEP1-201ENST00000318988 VPS53Q5VIR6 699 aa32.81■■■□□ 2.84
CTDNEP1-201ENST00000318988 RIOK1Q9BRS2 568 aaKnown RBP32.81■■■□□ 2.84
CTDNEP1-201ENST00000318988 RNF181Q9P0P0 153 aa32.81■■■□□ 2.84
CTDNEP1-201ENST00000318988 SLC4A4Q9Y6R1 1079 aa32.81■■■□□ 2.84
CTDNEP1-201ENST00000318988 HDLBPQ00341 1268 aaKnown RBP32.8■■■□□ 2.84
CTDNEP1-201ENST00000318988 HHIPL2Q6UWX4 724 aa32.8■■■□□ 2.84
CTDNEP1-201ENST00000318988 OGFOD1Q8N543 542 aa32.8■■■□□ 2.84
CTDNEP1-201ENST00000318988 MRIQ9BWK5 157 aa32.8■■■□□ 2.84
CTDNEP1-201ENST00000318988 CRNKL1Q9BZJ0 848 aaKnown RBP32.8■■■□□ 2.84
CTDNEP1-201ENST00000318988 RBM8AQ9Y5S9 174 aaKnown RBP32.8■■■□□ 2.84
CTDNEP1-201ENST00000318988 GAKO14976 1311 aa32.79■■■□□ 2.84
CTDNEP1-201ENST00000318988 PLCG2P16885 1265 aa32.79■■■□□ 2.84
CTDNEP1-201ENST00000318988 GPR75-ASB3A0A0A6YYF3 556 aa32.78■■■□□ 2.84
CTDNEP1-201ENST00000318988 PATL2C9JE40 543 aaKnown RBP32.78■■■□□ 2.84
CTDNEP1-201ENST00000318988 BTDP43251 543 aa32.78■■■□□ 2.84
CTDNEP1-201ENST00000318988 CRKP46108 304 aa32.78■■■□□ 2.84
CTDNEP1-201ENST00000318988 RBM25P49756 843 aaKnown RBP32.78■■■□□ 2.84
CTDNEP1-201ENST00000318988 RBM5P52756 815 aaKnown RBP eCLIP32.78■■■□□ 2.84
CTDNEP1-201ENST00000318988 NACAP1Q9BZK3 213 aa32.78■■■□□ 2.84
CTDNEP1-201ENST00000318988 CTNNA3Q9UI47 895 aa32.78■■■□□ 2.84
CTDNEP1-201ENST00000318988 ZBTB12Q9Y330 459 aaPredicted RBP32.78■■■□□ 2.84
CTDNEP1-201ENST00000318988 DAGLAQ9Y4D2 1042 aa32.78■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms