RNA–Protein interactions for RNA: ENST00000318787.13

HDDC2-201, Transcript of HD domain containing 2, humanhuman

TSL 1 (best)

Gene HDDC2, Length 1,350 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-201ENST00000318787 TIMM10P62072 90 aa19.9■□□□□ 0.78
HDDC2-201ENST00000318787 MAP2K1Q02750 393 aaPredicted RBP19.9■□□□□ 0.78
HDDC2-201ENST00000318787 ZBED3Q96IU2 234 aaPredicted RBP19.9■□□□□ 0.78
HDDC2-201ENST00000318787 AOX1Q06278 1338 aa19.9■□□□□ 0.78
HDDC2-201ENST00000318787 PHKA1P46020 1223 aa19.89■□□□□ 0.77
HDDC2-201ENST00000318787 MTMR14Q8NCE2 650 aa19.89■□□□□ 0.77
HDDC2-201ENST00000318787 HHIPL1Q96JK4 782 aa19.89■□□□□ 0.77
HDDC2-201ENST00000318787 YTHDC1Q96MU7 727 aaKnown RBP19.89■□□□□ 0.77
HDDC2-201ENST00000318787 TDRD3Q9H7E2 651 aaKnown RBP19.89■□□□□ 0.77
HDDC2-201ENST00000318787 WBP1LQ9NX94 342 aa19.89■□□□□ 0.77
HDDC2-201ENST00000318787 AKAP2Q9Y2D5 859 aa19.89■□□□□ 0.77
HDDC2-201ENST00000318787 COL1A1P02452 1464 aaPredicted RBP19.89■□□□□ 0.77
HDDC2-201ENST00000318787 A0A1B0GUL7 405 aa19.88■□□□□ 0.77
HDDC2-201ENST00000318787 UBE2Q2LH0YL09 131 aa19.88■□□□□ 0.77
HDDC2-201ENST00000318787 DEFB129Q9H1M3 183 aa19.88■□□□□ 0.77
HDDC2-201ENST00000318787 SERPINA10Q9UK55 444 aa19.88■□□□□ 0.77
HDDC2-201ENST00000318787 ZBTB7BO15156 539 aaPredicted RBP19.87■□□□□ 0.77
HDDC2-201ENST00000318787 MS4A1P11836 297 aa19.87■□□□□ 0.77
HDDC2-201ENST00000318787 GORABQ5T7V8 394 aa19.87■□□□□ 0.77
HDDC2-201ENST00000318787 WDR66Q8TBY9 1149 aa19.87■□□□□ 0.77
HDDC2-201ENST00000318787 TEKT1Q969V4 418 aa19.87■□□□□ 0.77
HDDC2-201ENST00000318787 FZD1Q9UP38 647 aa19.87■□□□□ 0.77
HDDC2-201ENST00000318787 TCP10L2B9ZVM9 353 aa19.86■□□□□ 0.77
HDDC2-201ENST00000318787 MAST3O60307 1309 aa19.86■□□□□ 0.77
HDDC2-201ENST00000318787 MAP2K2P36507 400 aa19.86■□□□□ 0.77
HDDC2-201ENST00000318787 AK9Q5TCS8 1911 aa19.86■□□□□ 0.77
HDDC2-201ENST00000318787 CCDC102BQ68D86 513 aa19.86■□□□□ 0.77
HDDC2-201ENST00000318787 TNS4Q8IZW8 715 aa19.86■□□□□ 0.77
HDDC2-201ENST00000318787 XAGE2Q96GT9 111 aa19.86■□□□□ 0.77
HDDC2-201ENST00000318787 ZNF70Q9UC06 446 aaPredicted RBP19.86■□□□□ 0.77
HDDC2-201ENST00000318787 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.86■□□□□ 0.77
HDDC2-201ENST00000318787 AKAP11Q9UKA4 1901 aa19.86■□□□□ 0.77
HDDC2-201ENST00000318787 MYH2Q9UKX2 1941 aa19.86■□□□□ 0.77
HDDC2-201ENST00000318787 SURF6O75683 361 aaKnown RBP19.85■□□□□ 0.77
HDDC2-201ENST00000318787 CTCFP49711 727 aaPredicted RBP19.85■□□□□ 0.77
HDDC2-201ENST00000318787 ATP8B2P98198 1209 aa19.85■□□□□ 0.77
HDDC2-201ENST00000318787 NOGQ13253 232 aa19.85■□□□□ 0.77
HDDC2-201ENST00000318787 ZIC5Q96T25 663 aa19.85■□□□□ 0.77
HDDC2-201ENST00000318787 TSKSQ9UJT2 592 aa19.85■□□□□ 0.77
HDDC2-201ENST00000318787 DENND2AQ9ULE3 1009 aa19.85■□□□□ 0.77
HDDC2-201ENST00000318787 COG6Q9Y2V7 657 aa19.85■□□□□ 0.77
HDDC2-201ENST00000318787 LBX1P52954 281 aa19.84■□□□□ 0.77
HDDC2-201ENST00000318787 FKBP1BP68106 108 aa19.84■□□□□ 0.77
HDDC2-201ENST00000318787 ARMC9Q7Z3E5 817 aa19.84■□□□□ 0.77
HDDC2-201ENST00000318787 CCDC102AQ96A19 550 aa19.84■□□□□ 0.77
HDDC2-201ENST00000318787 ANGEL1Q9UNK9 670 aaKnown RBP19.84■□□□□ 0.77
HDDC2-201ENST00000318787 PRDX5P30044 214 aa19.83■□□□□ 0.77
HDDC2-201ENST00000318787 CACNB3P54284 484 aa19.83■□□□□ 0.77
HDDC2-201ENST00000318787 MKRN3Q13064 507 aaKnown RBP19.83■□□□□ 0.77
HDDC2-201ENST00000318787 TNFAIP1Q13829 316 aa19.83■□□□□ 0.77
HDDC2-201ENST00000318787 RASA3Q14644 834 aa19.83■□□□□ 0.77
HDDC2-201ENST00000318787 MVPQ14764 893 aaKnown RBP19.83■□□□□ 0.77
HDDC2-201ENST00000318787 SPDYE2Q495Y8 402 aa19.83■□□□□ 0.77
HDDC2-201ENST00000318787 TMOD2Q9NZR1 351 aa19.83■□□□□ 0.77
HDDC2-201ENST00000318787 LDHBP07195 334 aaKnown RBP19.83■□□□□ 0.76
HDDC2-201ENST00000318787 POLA2Q14181 598 aa19.83■□□□□ 0.76
HDDC2-201ENST00000318787 SSH3Q8TE77 659 aa19.83■□□□□ 0.76
HDDC2-201ENST00000318787 BCL11AQ9H165 835 aa19.83■□□□□ 0.76
HDDC2-201ENST00000318787 ABCF2Q9UG63 623 aa19.83■□□□□ 0.76
HDDC2-201ENST00000318787 PPP2R3BQ9Y5P8 575 aa19.83■□□□□ 0.76
HDDC2-201ENST00000318787 FAM155AB1AL88 458 aaPredicted RBP19.82■□□□□ 0.76
HDDC2-201ENST00000318787 SEMA3EO15041 775 aa19.82■□□□□ 0.76
HDDC2-201ENST00000318787 SLC10A3P09131 477 aa19.82■□□□□ 0.76
HDDC2-201ENST00000318787 TNNI2P48788 182 aa19.82■□□□□ 0.76
HDDC2-201ENST00000318787 KIF23Q02241 960 aaPredicted RBP19.82■□□□□ 0.76
HDDC2-201ENST00000318787 RASGRF1Q13972 1273 aa19.82■□□□□ 0.76
HDDC2-201ENST00000318787 DIXDC1Q155Q3 683 aa19.82■□□□□ 0.76
HDDC2-201ENST00000318787 NBPF12Q5TAG4 269 aaPredicted RBP19.82■□□□□ 0.76
HDDC2-201ENST00000318787 RASAL3Q86YV0 1011 aa19.82■□□□□ 0.76
HDDC2-201ENST00000318787 SUGT1Q9Y2Z0 365 aa19.82■□□□□ 0.76
HDDC2-201ENST00000318787 SSC5DA1L4H1 1573 aa19.81■□□□□ 0.76
HDDC2-201ENST00000318787 HDLBPQ00341 1268 aaKnown RBP19.81■□□□□ 0.76
HDDC2-201ENST00000318787 SUPT20HL1Q3ZLR7 823 aa19.81■□□□□ 0.76
HDDC2-201ENST00000318787 CEP85Q6P2H3 762 aa19.81■□□□□ 0.76
HDDC2-201ENST00000318787 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.81■□□□□ 0.76
HDDC2-201ENST00000318787 DDX19BQ9UMR2 479 aa19.81■□□□□ 0.76
HDDC2-201ENST00000318787 OTOFQ9HC10 1997 aa19.8■□□□□ 0.76
HDDC2-201ENST00000318787 PPP1R12BO60237 982 aaPredicted RBP19.8■□□□□ 0.76
HDDC2-201ENST00000318787 HSPA8P11142 646 aaKnown RBP19.8■□□□□ 0.76
HDDC2-201ENST00000318787 DZIP1Q86YF9 867 aaKnown RBP19.8■□□□□ 0.76
HDDC2-201ENST00000318787 ZDHHC15Q96MV8 337 aa19.8■□□□□ 0.76
HDDC2-201ENST00000318787 TMEM39BQ9GZU3 492 aa19.8■□□□□ 0.76
HDDC2-201ENST00000318787 PRDM10Q9NQV6 1147 aa19.8■□□□□ 0.76
HDDC2-201ENST00000318787 U3KPZ7 1027 aaPredicted RBP19.8■□□□□ 0.76
HDDC2-201ENST00000318787 ZGPATQ8N5A5 531 aaKnown RBP19.79■□□□□ 0.76
HDDC2-201ENST00000318787 EXOC6BQ9Y2D4 811 aa19.79■□□□□ 0.76
HDDC2-201ENST00000318787 APBB1O00213 710 aa19.78■□□□□ 0.76
HDDC2-201ENST00000318787 CAPN15O75808 1086 aa19.78■□□□□ 0.76
HDDC2-201ENST00000318787 TNNI3KQ59H18 835 aa19.78■□□□□ 0.76
HDDC2-201ENST00000318787 TTC39AQ5SRH9 613 aa19.78■□□□□ 0.76
HDDC2-201ENST00000318787 HHIPL2Q6UWX4 724 aa19.78■□□□□ 0.76
HDDC2-201ENST00000318787 PI16Q6UXB8 463 aa19.78■□□□□ 0.76
HDDC2-201ENST00000318787 CDAN1Q8IWY9 1227 aa19.78■□□□□ 0.76
HDDC2-201ENST00000318787 DAGLAQ9Y4D2 1042 aa19.78■□□□□ 0.76
HDDC2-201ENST00000318787 FPGT-TNNI3KV9GXZ4 949 aa19.78■□□□□ 0.76
HDDC2-201ENST00000318787 C20orf194Q5TEA3 1177 aa19.77■□□□□ 0.76
HDDC2-201ENST00000318787 APOBEC3HQ6NTF7 200 aaKnown RBP19.77■□□□□ 0.76
HDDC2-201ENST00000318787 CASP8AP2Q9UKL3 1982 aa19.77■□□□□ 0.75
HDDC2-201ENST00000318787 SALL1Q9NSC2 1324 aa19.76■□□□□ 0.75
HDDC2-201ENST00000318787 MYO5AQ9Y4I1 1855 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms