RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 FAM170AA1A519 330 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 N4BP3O15049 544 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 IMMTQ16891 758 aaKnown RBP8.61□□□□□ -1.03
CDHR3-201ENST00000317716 CT47A1Q5JQC4 288 aaPredicted RBP8.61□□□□□ -1.03
CDHR3-201ENST00000317716 GBP3Q9H0R5 595 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 POLR1AO95602 1720 aaPredicted RBP8.61□□□□□ -1.03
CDHR3-201ENST00000317716 IVLP07476 585 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 NDUFA8P51970 172 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 PNOCQ13519 176 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 SLFNL1Q499Z3 407 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 TAX1BP1Q86VP1 789 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 CCDC148Q8NFR7 591 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 PGBD1Q96JS3 809 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 ALG1Q9BT22 464 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 SLC26A6Q9BXS9 759 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 TLR7Q9NYK1 1049 aaKnown RBP8.61□□□□□ -1.03
CDHR3-201ENST00000317716 LAMC1P11047 1609 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 TNS3Q68CZ2 1445 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 A0A087WZG4 1122 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 RAD21O60216 631 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 ZNF202O95125 648 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 LRRFIP1Q32MZ4 808 aaKnown RBP8.61□□□□□ -1.03
CDHR3-201ENST00000317716 ATRIPQ8WXE1 791 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 ZBTB3Q9H5J0 574 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 TMOD3Q9NYL9 352 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 FAN1Q9Y2M0 1017 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 ERBB3P21860 1342 aa8.61□□□□□ -1.03
CDHR3-201ENST00000317716 SOS2Q07890 1332 aaPredicted RBP8.61□□□□□ -1.03
CDHR3-201ENST00000317716 CCDC175P0C221 793 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 ERCC3P19447 782 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 MYL5Q02045 173 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 BICDL1Q6ZP65 573 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 SMIM5Q71RC9 77 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 EEF2KMTQ96G04 330 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 BICC1Q9H694 974 aaKnown RBP8.6□□□□□ -1.03
CDHR3-201ENST00000317716 ZNHIT6Q9NWK9 470 aaKnown RBP8.6□□□□□ -1.03
CDHR3-201ENST00000317716 MORC2Q9Y6X9 1032 aaPredicted RBP8.6□□□□□ -1.03
CDHR3-201ENST00000317716 STRCQ7RTU9 1775 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 IFT172Q9UG01 1749 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 NBPF11Q86T75 865 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 ZNF589Q86UQ0 364 aaPredicted RBP8.6□□□□□ -1.03
CDHR3-201ENST00000317716 LRRN4CLQ8ND94 238 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 RGS22Q8NE09 1264 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 DHX58Q96C10 678 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 MYL10Q9BUA6 226 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 CTAGE9A4FU28 777 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 USP8P40818 1118 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 TIMM10P62072 90 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 MRPS25P82663 173 aaKnown RBP8.6□□□□□ -1.03
CDHR3-201ENST00000317716 SLC4A8Q2Y0W8 1093 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 KCNG4Q8TDN1 519 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 FANCLQ9NW38 375 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 MAGEC2Q9UBF1 373 aaPredicted RBP8.6□□□□□ -1.03
CDHR3-201ENST00000317716 DACH1Q9UI36 760 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 SBNO1A3KN83 1393 aa8.6□□□□□ -1.03
CDHR3-201ENST00000317716 TRIM37O94972 964 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 SF3B2Q13435 895 aaKnown RBP8.59□□□□□ -1.03
CDHR3-201ENST00000317716 CCDC158Q5M9N0 1113 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 TRIM22Q8IYM9 498 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 EAF2Q96CJ1 260 aaPredicted RBP8.59□□□□□ -1.03
CDHR3-201ENST00000317716 MRFAP1L1Q96HT8 127 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 DBNDD2Q9BQY9 259 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 TANGO6Q9C0B7 1094 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 ZSWIM6Q9HCJ5 1215 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 CEP126Q9P2H0 1117 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 GOLGA8AA7E2F4 631 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 EBAG9O00559 213 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 CHGBP05060 677 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 GPTP24298 496 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 TFCP2Q12800 502 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 HDXQ7Z353 690 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 IFNL2Q8IZJ0 200 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 PHKBQ93100 1093 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 CLIC6Q96NY7 704 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 DBF4Q9UBU7 674 aaPredicted RBP8.59□□□□□ -1.03
CDHR3-201ENST00000317716 PCDHA7Q9UN72 937 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 NFE2L3Q9Y4A8 694 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 ANKARQ7Z5J8 1434 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 ZNF213O14771 459 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 RNASE9P60153 205 aaKnown RBP8.59□□□□□ -1.03
CDHR3-201ENST00000317716 LONRF2Q1L5Z9 754 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 SEPT12Q8IYM1 358 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 PARD6BQ9BYG5 372 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 VPS16Q9H269 839 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 HMG20BQ9P0W2 317 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 KIAA1468Q9P260 1216 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 CLIC4Q9Y696 253 aa8.59□□□□□ -1.03
CDHR3-201ENST00000317716 CPSF1Q10570 1443 aaKnown RBP8.58□□□□□ -1.04
CDHR3-201ENST00000317716 RPAP1Q9BWH6 1393 aaPredicted RBP8.58□□□□□ -1.04
CDHR3-201ENST00000317716 JCADQ9P266 1359 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 KCNQ2O43526 872 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 METAP2P50579 478 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDHR3-201ENST00000317716 HLTFQ14527 1009 aaKnown RBP eCLIP8.58□□□□□ -1.04
CDHR3-201ENST00000317716 MCMDC2Q4G0Z9 681 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 POLD4Q9HCU8 107 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 GPHNQ9NQX3 736 aaPredicted RBP8.58□□□□□ -1.04
CDHR3-201ENST00000317716 PPP2R2CQ9Y2T4 447 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 TAF6LQ9Y6J9 622 aa8.58□□□□□ -1.04
CDHR3-201ENST00000317716 CHD2O14647 1828 aaKnown RBP8.58□□□□□ -1.04
CDHR3-201ENST00000317716 LOC102724159A0A0B4J2E5 919 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms