RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TMTC1Q8IUR5 882 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 TACO1Q9BSH4 297 aaKnown RBP5.47□□□□□ -1.53
PTPN13-201ENST00000316707 BIN1O00499 593 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 ZBTB22O15209 634 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 IQCEQ6IPM2 695 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 SUCLG2Q96I99 432 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 TRERF1Q96PN7 1200 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 ST7Q9NRC1 585 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 TMEM2Q9UHN6 1383 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 RIC3Q7Z5B4 369 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 PDILTQ8N807 584 aa5.47□□□□□ -1.53
PTPN13-201ENST00000316707 MYCBPQ99417 103 aaPredicted RBP5.47□□□□□ -1.53
PTPN13-201ENST00000316707 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.47□□□□□ -1.53
PTPN13-201ENST00000316707 DIP2CQ9Y2E4 1556 aa5.46□□□□□ -1.53
PTPN13-201ENST00000316707 BEND6Q5SZJ8 279 aaPredicted RBP5.46□□□□□ -1.53
PTPN13-201ENST00000316707 CNNM3Q8NE01 707 aa5.46□□□□□ -1.53
PTPN13-201ENST00000316707 CCDC148Q8NFR7 591 aa5.46□□□□□ -1.53
PTPN13-201ENST00000316707 SIL1Q9H173 461 aa5.46□□□□□ -1.53
PTPN13-201ENST00000316707 TMEM131LA2VDJ0 1609 aa5.46□□□□□ -1.53
PTPN13-201ENST00000316707 CARMIL3Q8ND23 1372 aa5.46□□□□□ -1.53
PTPN13-201ENST00000316707 SEMA3EO15041 775 aa5.46□□□□□ -1.53
PTPN13-201ENST00000316707 KIF23Q02241 960 aaPredicted RBP5.46□□□□□ -1.53
PTPN13-201ENST00000316707 MMS22LQ6ZRQ5 1243 aa5.46□□□□□ -1.53
PTPN13-201ENST00000316707 SPATS2Q86XZ4 545 aaKnown RBP5.46□□□□□ -1.53
PTPN13-201ENST00000316707 HPSEQ9Y251 543 aa5.46□□□□□ -1.53
PTPN13-201ENST00000316707 COL15A1P39059 1388 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 CTAGE9A4FU28 777 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 AKR1B15C9JRZ8 316 aaPredicted RBP5.46□□□□□ -1.54
PTPN13-201ENST00000316707 RNF113AO15541 343 aaKnown RBP5.46□□□□□ -1.54
PTPN13-201ENST00000316707 BMP15O95972 392 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 ZMYM1Q5SVZ6 1142 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 SWT1Q5T5J6 900 aaKnown RBP5.46□□□□□ -1.54
PTPN13-201ENST00000316707 IP6K1Q92551 441 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 CCDC102AQ96A19 550 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 RAI14Q9P0K7 980 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 DBNLQ9UJU6 430 aaKnown RBP5.46□□□□□ -1.54
PTPN13-201ENST00000316707 FBXO3Q9UK99 471 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 IL15P40933 162 aaPredicted RBP5.46□□□□□ -1.54
PTPN13-201ENST00000316707 TRIM14Q14142 442 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 GCKRQ14397 625 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 WDR93Q6P2C0 686 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 NCOA7Q8NI08 942 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 SMARCC1Q92922 1105 aaPredicted RBP5.46□□□□□ -1.54
PTPN13-201ENST00000316707 ZCCHC17Q9NP64 241 aaKnown RBP5.46□□□□□ -1.54
PTPN13-201ENST00000316707 NFE2L3Q9Y4A8 694 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 SEC31AO94979 1220 aaKnown RBP5.46□□□□□ -1.54
PTPN13-201ENST00000316707 MCM6Q14566 821 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 OSCARQ8IYS5 282 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.46□□□□□ -1.54
PTPN13-201ENST00000316707 KCNH3Q9ULD8 1083 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 ROBO2Q9HCK4 1378 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 E7EWF7 191 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 SASH3O75995 380 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 ATP1A3P13637 1013 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 TBX2Q13207 712 aaPredicted RBP5.46□□□□□ -1.54
PTPN13-201ENST00000316707 RILPL1Q5EBL4 403 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 POTEDQ86YR6 584 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 PYM1Q9BRP8 204 aaKnown RBP5.46□□□□□ -1.54
PTPN13-201ENST00000316707 VPS18Q9P253 973 aa5.46□□□□□ -1.54
PTPN13-201ENST00000316707 IPO7O95373 1038 aaKnown RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 CCT2P78371 535 aaKnown RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 SETQ01105 290 aaPredicted RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 CCDC91Q7Z6B0 441 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 KRI1Q8N9T8 703 aaKnown RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 PCDHA5Q9Y5H7 936 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 PLEKHG2Q9H7P9 1386 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 EBAG9O00559 213 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 SUGP1Q8IWZ8 645 aaKnown RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 CRACR2AQ9BSW2 395 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 ATG3Q9NT62 314 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 GOLGA8BA8MQT2 603 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 CTDNEP1O95476 244 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 FDPSP14324 419 aaKnown RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 CORO7P57737 925 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 CKAP4Q07065 602 aaKnown RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 CWF19L2Q2TBE0 894 aaKnown RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 RABL6Q3YEC7 729 aaPredicted RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 NAPGQ99747 312 aaPredicted RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 MTA3Q9BTC8 594 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 BICC1Q9H694 974 aaKnown RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 FANCLQ9NW38 375 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 CEP131Q9UPN4 1083 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 TBC1D2BQ9UPU7 963 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 OVOS2A0A0G2JMS6 1433 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 KLF18A0A0U1RQI7 1052 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 GBP6Q6ZN66 633 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 FBXW7Q969H0 707 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 WDR24Q96S15 920 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 CEP89Q96ST8 783 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 METTL22Q9BUU2 404 aaPredicted RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 FTOQ9C0B1 505 aaKnown RBP eCLIP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 HAUS4Q9H6D7 363 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 PDE11AQ9HCR9 933 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 ADGRG1Q9Y653 693 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 TMEM139Q8IV31 216 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 PALLDQ8WX93 1383 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 CPP00450 1065 aa5.45□□□□□ -1.54
PTPN13-201ENST00000316707 POLR3DP05423 398 aaPredicted RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 HSPD1P10809 573 aaKnown RBP5.45□□□□□ -1.54
PTPN13-201ENST00000316707 TSR1Q2NL82 804 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms