RNA–Protein interactions for RNA: ENST00000316099.8

HNF4A-201, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNF4A, Length 6,445 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-201ENST00000316099 FAM182BQ5T319 152 aa12.35□□□□□ -0.43
HNF4A-201ENST00000316099 TRERF1Q96PN7 1200 aa12.35□□□□□ -0.43
HNF4A-201ENST00000316099 PUS3Q9BZE2 481 aaKnown RBP12.35□□□□□ -0.43
HNF4A-201ENST00000316099 ZFYP08048 801 aaPredicted RBP12.35□□□□□ -0.43
HNF4A-201ENST00000316099 PI4K2BQ8TCG2 481 aa12.35□□□□□ -0.43
HNF4A-201ENST00000316099 NAPBQ9H115 298 aa12.35□□□□□ -0.43
HNF4A-201ENST00000316099 IL6STP40189 918 aaPredicted RBP12.35□□□□□ -0.43
HNF4A-201ENST00000316099 PAFAH1B1P43034 410 aa12.35□□□□□ -0.43
HNF4A-201ENST00000316099 LRRC2Q9BYS8 371 aa12.35□□□□□ -0.43
HNF4A-201ENST00000316099 ZSCAN16Q9H4T2 348 aaPredicted RBP12.35□□□□□ -0.43
HNF4A-201ENST00000316099 COL5A2P05997 1499 aaPredicted RBP12.34□□□□□ -0.43
HNF4A-201ENST00000316099 KCNQ4P56696 695 aa12.34□□□□□ -0.43
HNF4A-201ENST00000316099 SLC9C2Q5TAH2 1124 aa12.34□□□□□ -0.43
HNF4A-201ENST00000316099 EZRP15311 586 aaKnown RBP12.34□□□□□ -0.43
HNF4A-201ENST00000316099 FEZ1Q99689 392 aa12.34□□□□□ -0.43
HNF4A-201ENST00000316099 PALD1Q9ULE6 856 aa12.34□□□□□ -0.43
HNF4A-201ENST00000316099 MTX1Q13505 466 aa12.34□□□□□ -0.43
HNF4A-201ENST00000316099 RNF187Q5TA31 235 aaPredicted RBP12.34□□□□□ -0.43
HNF4A-201ENST00000316099 H7C1W4 665 aa12.34□□□□□ -0.43
HNF4A-201ENST00000316099 HLFQ16534 295 aa12.34□□□□□ -0.43
HNF4A-201ENST00000316099 RUFY3Q7L099 469 aa12.34□□□□□ -0.43
HNF4A-201ENST00000316099 HSPA4P34932 840 aa12.34□□□□□ -0.43
HNF4A-201ENST00000316099 CNNM3Q8NE01 707 aa12.34□□□□□ -0.43
HNF4A-201ENST00000316099 DYDC1Q8WWB3 177 aa12.34□□□□□ -0.43
HNF4A-201ENST00000316099 NUP88Q99567 741 aaPredicted RBP12.34□□□□□ -0.43
HNF4A-201ENST00000316099 GREM2Q9H772 168 aa12.34□□□□□ -0.43
HNF4A-201ENST00000316099 DBNLQ9UJU6 430 aaKnown RBP12.34□□□□□ -0.43
HNF4A-201ENST00000316099 TAF5LO75529 589 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 NAA15Q9BXJ9 866 aaKnown RBP12.33□□□□□ -0.44
HNF4A-201ENST00000316099 SLC27A2O14975 620 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 CCT2P78371 535 aaKnown RBP12.33□□□□□ -0.44
HNF4A-201ENST00000316099 OGFRQ9NZT2 677 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 GOLGA6L10A0A0M3HER8 536 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 PTH1RQ03431 593 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 MINDY4BA8MYZ0 360 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 TPTE2Q6XPS3 522 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 LUZP1Q86V48 1076 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 EHBP1Q8NDI1 1231 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 ALS2CR12Q96Q35 445 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 HELLSQ9NRZ9 838 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 A0A0D9SFI3 127 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 TRAPPC3LQ5T215 181 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 NLRP10Q86W26 655 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 ZSCAN29Q8IWY8 852 aaPredicted RBP12.33□□□□□ -0.44
HNF4A-201ENST00000316099 KBTBD3Q8NAB2 608 aa12.33□□□□□ -0.44
HNF4A-201ENST00000316099 CCDC196A0A1B0GTZ2 297 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 SLU7O95391 586 aaKnown RBP12.32□□□□□ -0.44
HNF4A-201ENST00000316099 FGFR1OPO95684 399 aaKnown RBP12.32□□□□□ -0.44
HNF4A-201ENST00000316099 PUM3Q15397 648 aaKnown RBP12.32□□□□□ -0.44
HNF4A-201ENST00000316099 GIMAP6Q6P9H5 292 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 USP48Q86UV5 1035 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 RGPD2P0DJD1 1756 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 GCOM1H8Y6P7 765 aaPredicted RBP12.32□□□□□ -0.44
HNF4A-201ENST00000316099 CD2BP2O95400 341 aaKnown RBP12.32□□□□□ -0.44
HNF4A-201ENST00000316099 MYZAPP0CAP1 466 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 GTF2A1P52655 376 aaPredicted RBP12.32□□□□□ -0.44
HNF4A-201ENST00000316099 TERF1P54274 439 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 Q6ZUG5 572 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 CCDC24Q8N4L8 307 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 GPATCH11Q8N954 259 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 ZNF830Q96NB3 372 aaPredicted RBP12.32□□□□□ -0.44
HNF4A-201ENST00000316099 ANKRD62A6NC57 917 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 SKILP12757 684 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 TSG101Q99816 390 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 ARFGAP3Q9NP61 516 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 FBXO3Q9UK99 471 aa12.32□□□□□ -0.44
HNF4A-201ENST00000316099 CYP19A1P11511 503 aaPredicted RBP12.31□□□□□ -0.44
HNF4A-201ENST00000316099 ST5P78524 1137 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 KANK3Q6NY19 840 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 CCDC12Q8WUD4 166 aaPredicted RBP12.31□□□□□ -0.44
HNF4A-201ENST00000316099 HAUS7Q99871 368 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 TUBB4BP68371 445 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
HNF4A-201ENST00000316099 ANO6Q4KMQ2 910 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 PALLDQ8WX93 1383 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 GNG11P61952 73 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 IFFO1Q0D2I5 559 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 SMC1AQ14683 1233 aaKnown RBP12.31□□□□□ -0.44
HNF4A-201ENST00000316099 CCDC91Q7Z6B0 441 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 ZHX3Q9H4I2 956 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 MED1Q15648 1581 aaPredicted RBP12.31□□□□□ -0.44
HNF4A-201ENST00000316099 RGPD1P0DJD0 1748 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 ZAP70P43403 619 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 CCDC186Q7Z3E2 898 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 MAGEB6Q8N7X4 407 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 BRF1Q92994 677 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 SPATA31A1Q5TZJ5 1347 aa12.31□□□□□ -0.44
HNF4A-201ENST00000316099 CKAP4Q07065 602 aaKnown RBP12.31□□□□□ -0.44
HNF4A-201ENST00000316099 PYM1Q9BRP8 204 aaKnown RBP12.31□□□□□ -0.44
HNF4A-201ENST00000316099 KLHL10Q6JEL2 608 aa12.3□□□□□ -0.44
HNF4A-201ENST00000316099 LSG1Q9H089 658 aaKnown RBP12.3□□□□□ -0.44
HNF4A-201ENST00000316099 SEPT11Q9NVA2 429 aaKnown RBP12.3□□□□□ -0.44
HNF4A-201ENST00000316099 CIAO1O76071 339 aa12.3□□□□□ -0.44
HNF4A-201ENST00000316099 DZIP1Q86YF9 867 aaKnown RBP12.3□□□□□ -0.44
HNF4A-201ENST00000316099 CNPY2Q9Y2B0 182 aa12.3□□□□□ -0.44
HNF4A-201ENST00000316099 MPHOSPH10O00566 681 aaKnown RBP12.3□□□□□ -0.44
HNF4A-201ENST00000316099 PPFIA3O75145 1194 aa12.3□□□□□ -0.44
HNF4A-201ENST00000316099 CHST3Q7LGC8 479 aa12.3□□□□□ -0.44
HNF4A-201ENST00000316099 SEC62Q99442 399 aaKnown RBP12.3□□□□□ -0.44
HNF4A-201ENST00000316099 ADORA1P30542 326 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms