RNA–Protein interactions for RNA: ENST00000316087.12

SPATA9-202, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-202ENST00000316087 DNAJC25Q9H1X3 360 aa7.22□□□□□ -1.25
SPATA9-202ENST00000316087 BOLA2Q9H3K6 86 aa7.22□□□□□ -1.25
SPATA9-202ENST00000316087 RTEL1Q9NZ71 1219 aa7.22□□□□□ -1.25
SPATA9-202ENST00000316087 FPGT-TNNI3KV9GXZ4 949 aa7.22□□□□□ -1.25
SPATA9-202ENST00000316087 NEURL1BA8MQ27 555 aa7.21□□□□□ -1.25
SPATA9-202ENST00000316087 AP5Z1O43299 807 aa7.21□□□□□ -1.25
SPATA9-202ENST00000316087 ZSCAN12O43309 604 aa7.21□□□□□ -1.25
SPATA9-202ENST00000316087 CDKL5O76039 1030 aa7.21□□□□□ -1.25
SPATA9-202ENST00000316087 SFPQP23246 707 aaKnown RBP eCLIP7.21□□□□□ -1.25
SPATA9-202ENST00000316087 ME1P48163 572 aa7.21□□□□□ -1.25
SPATA9-202ENST00000316087 SF3A1Q15459 793 aaKnown RBP7.21□□□□□ -1.25
SPATA9-202ENST00000316087 TEX35Q5T0J7 233 aa7.21□□□□□ -1.25
SPATA9-202ENST00000316087 CPLX2Q6PUV4 134 aaKnown RBP7.21□□□□□ -1.25
SPATA9-202ENST00000316087 ZNF771Q7L3S4 317 aaPredicted RBP7.21□□□□□ -1.25
SPATA9-202ENST00000316087 ELOA2Q8IYF1 753 aaPredicted RBP7.21□□□□□ -1.25
SPATA9-202ENST00000316087 ANKRD13AQ8IZ07 590 aa7.21□□□□□ -1.25
SPATA9-202ENST00000316087 CCAR2Q8N163 923 aaKnown RBP7.21□□□□□ -1.25
SPATA9-202ENST00000316087 BANK1Q8NDB2 785 aa7.21□□□□□ -1.25
SPATA9-202ENST00000316087 CACTINQ8WUQ7 758 aaKnown RBP7.21□□□□□ -1.25
SPATA9-202ENST00000316087 SREK1Q8WXA9 508 aaKnown RBP7.21□□□□□ -1.25
SPATA9-202ENST00000316087 SUCLG2Q96I99 432 aa7.21□□□□□ -1.25
SPATA9-202ENST00000316087 PGBD1Q96JS3 809 aa7.21□□□□□ -1.25
SPATA9-202ENST00000316087 SDF4Q9BRK5 362 aa7.21□□□□□ -1.25
SPATA9-202ENST00000316087 CCDC8Q9H0W5 538 aaPredicted RBP7.21□□□□□ -1.25
SPATA9-202ENST00000316087 LGR6Q9HBX8 967 aa7.21□□□□□ -1.25
SPATA9-202ENST00000316087 TFIP11Q9UBB9 837 aaKnown RBP7.21□□□□□ -1.25
SPATA9-202ENST00000316087 PHLPP2Q6ZVD8 1323 aa7.21□□□□□ -1.26
SPATA9-202ENST00000316087 FAM205CA6NFA0 338 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 CCDC69A6NI79 296 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 IL15P40933 162 aaPredicted RBP7.2□□□□□ -1.26
SPATA9-202ENST00000316087 ABL2P42684 1182 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 SNW1Q13573 536 aaKnown RBP7.2□□□□□ -1.26
SPATA9-202ENST00000316087 ZNF790Q6PG37 636 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 SYNE3Q6ZMZ3 975 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 ANKRD13DQ6ZTN6 518 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 TTC5Q8N0Z6 440 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 NSUN7Q8NE18 718 aaKnown RBP7.2□□□□□ -1.26
SPATA9-202ENST00000316087 ENGASEQ8NFI3 743 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 ZNF592Q92610 1267 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 HS3ST6Q96QI5 342 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 L2HGDHQ9H9P8 463 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 DACH1Q9UI36 760 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 CHMP3Q9Y3E7 222 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 LAMB4A4D0S4 1761 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 SCN11AQ9UI33 1791 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 MAP3K15Q6ZN16 1313 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 SALL1Q9NSC2 1324 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 PTPDC1A2A3K4 754 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 CIAO1O76071 339 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 CYP21A2P08686 494 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 SNRPA1P09661 255 aaKnown RBP7.2□□□□□ -1.26
SPATA9-202ENST00000316087 TUBB2AQ13885 445 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 HIC1Q14526 733 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 STK38Q15208 465 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 ATP2B3Q16720 1220 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 CWF19L2Q2TBE0 894 aaKnown RBP7.2□□□□□ -1.26
SPATA9-202ENST00000316087 CT47A1Q5JQC4 288 aaPredicted RBP7.2□□□□□ -1.26
SPATA9-202ENST00000316087 JAKMIP3Q5VZ66 844 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 MPRIPQ6WCQ1 1025 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 ARHGEF25Q86VW2 580 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 C17orf53Q8N3J3 647 aaPredicted RBP7.2□□□□□ -1.26
SPATA9-202ENST00000316087 FSIP1Q8NA03 581 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 RAPGEF4Q8WZA2 1011 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 DDX11Q96FC9 970 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 TUBB2BQ9BVA1 445 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 EMILIN3Q9NT22 766 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 CALCOCO1Q9P1Z2 691 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 KIAA1468Q9P260 1216 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 PA2G4Q9UQ80 394 aaKnown RBP7.2□□□□□ -1.26
SPATA9-202ENST00000316087 AKAP2Q9Y2D5 859 aa7.2□□□□□ -1.26
SPATA9-202ENST00000316087 V9GYY5 206 aaPredicted RBP7.2□□□□□ -1.26
SPATA9-202ENST00000316087 AFDNP55196 1824 aaKnown RBP7.19□□□□□ -1.26
SPATA9-202ENST00000316087 GRXCR2A6NFK2 248 aa7.19□□□□□ -1.26
SPATA9-202ENST00000316087 SLC3A2P08195 630 aaKnown RBP7.19□□□□□ -1.26
SPATA9-202ENST00000316087 TCF3P15923 654 aa7.19□□□□□ -1.26
SPATA9-202ENST00000316087 U2AF2P26368 475 aaKnown RBP eCLIP7.19□□□□□ -1.26
SPATA9-202ENST00000316087 NLRP12P59046 1061 aa7.19□□□□□ -1.26
SPATA9-202ENST00000316087 CCZ1BP86790 482 aa7.19□□□□□ -1.26
SPATA9-202ENST00000316087 CCZ1P86791 482 aaPredicted RBP7.19□□□□□ -1.26
SPATA9-202ENST00000316087 EXOSC10Q01780 885 aaKnown RBP7.19□□□□□ -1.26
SPATA9-202ENST00000316087 SCRN1Q12765 414 aa7.19□□□□□ -1.26
SPATA9-202ENST00000316087 LRMPQ12912 555 aa7.19□□□□□ -1.26
SPATA9-202ENST00000316087 STK3Q13188 491 aa7.19□□□□□ -1.26
SPATA9-202ENST00000316087 GPS2Q13227 327 aa7.19□□□□□ -1.26
SPATA9-202ENST00000316087 IMMTQ16891 758 aaKnown RBP7.19□□□□□ -1.26
SPATA9-202ENST00000316087 FMR1NBQ8N0W7 255 aaPredicted RBP7.19□□□□□ -1.26
SPATA9-202ENST00000316087 KAZALD1Q96I82 304 aa7.19□□□□□ -1.26
SPATA9-202ENST00000316087 FMNL2Q96PY5 1086 aa7.19□□□□□ -1.26
SPATA9-202ENST00000316087 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.19□□□□□ -1.26
SPATA9-202ENST00000316087 SLC52A2Q9HAB3 445 aa7.19□□□□□ -1.26
SPATA9-202ENST00000316087 PAG1Q9NWQ8 432 aa7.19□□□□□ -1.26
SPATA9-202ENST00000316087 PARP4Q9UKK3 1724 aaKnown RBP7.19□□□□□ -1.26
SPATA9-202ENST00000316087 ZNF142P52746 1687 aaPredicted RBP7.18□□□□□ -1.26
SPATA9-202ENST00000316087 CARMIL3Q8ND23 1372 aa7.18□□□□□ -1.26
SPATA9-202ENST00000316087 G3V3G9 751 aa7.18□□□□□ -1.26
SPATA9-202ENST00000316087 CPLX1O14810 134 aa7.18□□□□□ -1.26
SPATA9-202ENST00000316087 RNF113AO15541 343 aaKnown RBP7.18□□□□□ -1.26
SPATA9-202ENST00000316087 PPP6R2O75170 966 aa7.18□□□□□ -1.26
SPATA9-202ENST00000316087 GCP02774 474 aa7.18□□□□□ -1.26
SPATA9-202ENST00000316087 IGKV5-2P06315 115 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms