RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 HSPA1LP34931 641 aa14.62□□□□□ -0.07
RNF4-201ENST00000314289 ARHGEF1Q92888 912 aaKnown RBP14.62□□□□□ -0.07
RNF4-201ENST00000314289 ZNF512BQ96KM6 892 aaPredicted RBP14.62□□□□□ -0.07
RNF4-201ENST00000314289 CDC5LQ99459 802 aaKnown RBP14.62□□□□□ -0.07
RNF4-201ENST00000314289 MYH7P12883 1935 aa14.62□□□□□ -0.07
RNF4-201ENST00000314289 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.61□□□□□ -0.07
RNF4-201ENST00000314289 SMIM22K7EJ46 135 aa14.61□□□□□ -0.07
RNF4-201ENST00000314289 MAP3K12Q12852 859 aa14.61□□□□□ -0.07
RNF4-201ENST00000314289 UBE3CQ15386 1083 aa14.61□□□□□ -0.07
RNF4-201ENST00000314289 GIMAP6Q6P9H5 292 aa14.61□□□□□ -0.07
RNF4-201ENST00000314289 CLEC4GQ6UXB4 293 aa14.61□□□□□ -0.07
RNF4-201ENST00000314289 NCOA7Q8NI08 942 aa14.61□□□□□ -0.07
RNF4-201ENST00000314289 STRBPQ96SI9 672 aaKnown RBP14.61□□□□□ -0.07
RNF4-201ENST00000314289 MCM5P33992 734 aa14.61□□□□□ -0.07
RNF4-201ENST00000314289 KRT85P78386 507 aa14.61□□□□□ -0.07
RNF4-201ENST00000314289 CYB5R4Q7L1T6 521 aa14.61□□□□□ -0.07
RNF4-201ENST00000314289 ADGRA1Q86SQ6 560 aa14.61□□□□□ -0.07
RNF4-201ENST00000314289 MB21D2Q8IYB1 491 aaPredicted RBP14.61□□□□□ -0.07
RNF4-201ENST00000314289 LCORLQ8N3X6 602 aa14.61□□□□□ -0.07
RNF4-201ENST00000314289 TMEM87AQ8NBN3 555 aa14.61□□□□□ -0.07
RNF4-201ENST00000314289 EPB41L4AQ9HCS5 686 aaPredicted RBP14.61□□□□□ -0.07
RNF4-201ENST00000314289 GOLGA8BA8MQT2 603 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 CAMK4Q16566 473 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 GJD4Q96KN9 370 aaPredicted RBP14.6□□□□□ -0.07
RNF4-201ENST00000314289 TOMM22Q9NS69 142 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 TFCP2L1Q9NZI6 479 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 RTCBQ9Y3I0 505 aaKnown RBP14.6□□□□□ -0.07
RNF4-201ENST00000314289 AFF2P51816 1311 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 RRP12Q5JTH9 1297 aaKnown RBP14.6□□□□□ -0.07
RNF4-201ENST00000314289 VPS37DQ86XT2 251 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 MYL10Q9BUA6 226 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 MINPP1Q9UNW1 487 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 RPS6KA4O75676 772 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 SYAP1Q96A49 352 aaPredicted RBP14.6□□□□□ -0.07
RNF4-201ENST00000314289 SPATA32Q96LK8 384 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 AGXT2Q9BYV1 514 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 NARFQ9UHQ1 456 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 NEDD4P46934 1319 aa14.6□□□□□ -0.07
RNF4-201ENST00000314289 LIG1P18858 919 aa14.59□□□□□ -0.07
RNF4-201ENST00000314289 TRDNQ13061 729 aa14.59□□□□□ -0.07
RNF4-201ENST00000314289 ZKSCAN3Q9BRR0 538 aa14.59□□□□□ -0.07
RNF4-201ENST00000314289 RAI14Q9P0K7 980 aa14.59□□□□□ -0.07
RNF4-201ENST00000314289 COL5A3P25940 1745 aaPredicted RBP14.59□□□□□ -0.07
RNF4-201ENST00000314289 CNTNAP4Q9C0A0 1308 aa14.59□□□□□ -0.07
RNF4-201ENST00000314289 FAM196AQ6ZSG2 479 aa14.59□□□□□ -0.07
RNF4-201ENST00000314289 IFNL3Q8IZI9 196 aa14.59□□□□□ -0.07
RNF4-201ENST00000314289 SMARCC2Q8TAQ2 1214 aa14.59□□□□□ -0.07
RNF4-201ENST00000314289 SDR42E1Q8WUS8 393 aa14.59□□□□□ -0.07
RNF4-201ENST00000314289 NAPBQ9H115 298 aa14.59□□□□□ -0.07
RNF4-201ENST00000314289 TACC3Q9Y6A5 838 aa14.59□□□□□ -0.07
RNF4-201ENST00000314289 FDPSP14324 419 aaKnown RBP14.58□□□□□ -0.07
RNF4-201ENST00000314289 SEPT12Q8IYM1 358 aa14.58□□□□□ -0.07
RNF4-201ENST00000314289 MPNDQ8N594 471 aa14.58□□□□□ -0.07
RNF4-201ENST00000314289 TSPY26PQ9H489 355 aa14.58□□□□□ -0.07
RNF4-201ENST00000314289 SLC4A4Q9Y6R1 1079 aa14.58□□□□□ -0.07
RNF4-201ENST00000314289 RESTQ13127 1097 aa14.58□□□□□ -0.08
RNF4-201ENST00000314289 LRRC4BQ9NT99 713 aa14.58□□□□□ -0.08
RNF4-201ENST00000314289 HPS5Q9UPZ3 1129 aa14.58□□□□□ -0.08
RNF4-201ENST00000314289 CYP7A1P22680 504 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 RFC4P35249 363 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 TDO2P48775 406 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 CCDC183Q5T5S1 534 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 NLRP3Q96P20 1036 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 BTAF1O14981 1849 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 LRP5O75197 1615 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 GOLGA6L4A6NEF3 574 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 GSG1L2A8MUP6 293 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 ADD1P35611 737 aaKnown RBP14.57□□□□□ -0.08
RNF4-201ENST00000314289 SF3B3Q15393 1217 aaKnown RBP14.57□□□□□ -0.08
RNF4-201ENST00000314289 MICU3Q86XE3 530 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 LEO1Q8WVC0 666 aaPredicted RBP14.57□□□□□ -0.08
RNF4-201ENST00000314289 ZNF274Q96GC6 653 aaPredicted RBP14.57□□□□□ -0.08
RNF4-201ENST00000314289 AIFM3Q96NN9 605 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 UQCRHLA0A096LP55 91 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 UQCRHP07919 91 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 TICAM2Q86XR7 235 aa14.57□□□□□ -0.08
RNF4-201ENST00000314289 BSDC1Q9NW68 430 aaPredicted RBP14.57□□□□□ -0.08
RNF4-201ENST00000314289 NOL7Q9UMY1 257 aaKnown RBP14.57□□□□□ -0.08
RNF4-201ENST00000314289 RREB1Q92766 1687 aa14.56□□□□□ -0.08
RNF4-201ENST00000314289 UBE2Q2LH0YL09 131 aa14.56□□□□□ -0.08
RNF4-201ENST00000314289 CPLX1O14810 134 aa14.56□□□□□ -0.08
RNF4-201ENST00000314289 RPS8P62241 208 aaKnown RBP14.56□□□□□ -0.08
RNF4-201ENST00000314289 CHAF1AQ13111 956 aaPredicted RBP14.56□□□□□ -0.08
RNF4-201ENST00000314289 SLC4A8Q2Y0W8 1093 aa14.56□□□□□ -0.08
RNF4-201ENST00000314289 TXNRD3Q86VQ6 643 aa14.56□□□□□ -0.08
RNF4-201ENST00000314289 MINDY4BA8MYZ0 360 aa14.56□□□□□ -0.08
RNF4-201ENST00000314289 PATL2C9JE40 543 aaKnown RBP14.56□□□□□ -0.08
RNF4-201ENST00000314289 FAM84BQ96KN1 310 aaPredicted RBP14.56□□□□□ -0.08
RNF4-201ENST00000314289 GPR101Q96P66 508 aaPredicted RBP14.56□□□□□ -0.08
RNF4-201ENST00000314289 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.56□□□□□ -0.08
RNF4-201ENST00000314289 POLR3DP05423 398 aaPredicted RBP14.55□□□□□ -0.08
RNF4-201ENST00000314289 DYNLL1P63167 89 aaKnown RBP14.55□□□□□ -0.08
RNF4-201ENST00000314289 TPTE2Q6XPS3 522 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 CKAP2LQ8IYA6 745 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 LLPHQ9BRT6 129 aaKnown RBP14.55□□□□□ -0.08
RNF4-201ENST00000314289 CARMIL3Q8ND23 1372 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 CYP2D7A0A087X1C5 515 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 CAVIN4Q5BKX8 364 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 NFXL1Q6ZNB6 911 aa14.55□□□□□ -0.08
RNF4-201ENST00000314289 PHKBQ93100 1093 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms