RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 PHACTR3Q96KR7 559 aa13.93□□□□□ -0.18
EBF1-201ENST00000313708 PPP1R12CQ9BZL4 782 aa13.93□□□□□ -0.18
EBF1-201ENST00000313708 U3KPZ7 1027 aaPredicted RBP13.93□□□□□ -0.18
EBF1-201ENST00000313708 MACROD2A1Z1Q3 448 aa13.93□□□□□ -0.18
EBF1-201ENST00000313708 GGCXP38435 758 aa13.93□□□□□ -0.18
EBF1-201ENST00000313708 LACTBP83111 547 aaPredicted RBP13.93□□□□□ -0.18
EBF1-201ENST00000313708 ADCK5Q3MIX3 580 aa13.93□□□□□ -0.18
EBF1-201ENST00000313708 SLF1Q9BQI6 1058 aa13.93□□□□□ -0.18
EBF1-201ENST00000313708 AIMP1Q12904 312 aaKnown RBP13.92□□□□□ -0.18
EBF1-201ENST00000313708 DHX40Q8IX18 779 aaKnown RBP13.92□□□□□ -0.18
EBF1-201ENST00000313708 AKAP2Q9Y2D5 859 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 SLC27A2O14975 620 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 NUTM2AQ8IVF1 878 aaPredicted RBP13.92□□□□□ -0.18
EBF1-201ENST00000313708 FBF1Q8TES7 1133 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 TRIM4Q9C037 500 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 FTOQ9C0B1 505 aaKnown RBP eCLIP13.92□□□□□ -0.18
EBF1-201ENST00000313708 EMILIN1Q9Y6C2 1016 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 GOLGA8BA8MQT2 603 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 PDCLQ13371 301 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 TOGARAM2Q6ZUX3 1019 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 SELENOSQ9BQE4 189 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 KIRREL3Q8IZU9 778 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 NFE2L3Q9Y4A8 694 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 PARP3Q9Y6F1 533 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 ZRANB2O95218 330 aaKnown RBP eCLIP13.92□□□□□ -0.18
EBF1-201ENST00000313708 ATP1A3P13637 1013 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 NEXNQ0ZGT2 675 aa13.92□□□□□ -0.18
EBF1-201ENST00000313708 FAM43BQ6ZT52 329 aaPredicted RBP13.92□□□□□ -0.18
EBF1-201ENST00000313708 TRMT44Q8IYL2 757 aaKnown RBP13.92□□□□□ -0.18
EBF1-201ENST00000313708 CUTAO60888 179 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 ATP11AP98196 1134 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 ATL3Q6DD88 541 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 PGBD1Q96JS3 809 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 PTH1RQ03431 593 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 CCDC6Q16204 474 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 EGFL6Q8IUX8 553 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 CACNA2D3Q8IZS8 1091 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 SAMD15Q9P1V8 674 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 CCT6AP40227 531 aaKnown RBP13.91□□□□□ -0.18
EBF1-201ENST00000313708 NDUFA8P51970 172 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 NCAPH2Q6IBW4 605 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 TCP11Q8WWU5 503 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 KIF9Q9HAQ2 790 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 SAR1BQ9Y6B6 198 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 PNMA6EA0A0J9YXQ4 647 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 CYLC1P35663 651 aaPredicted RBP13.91□□□□□ -0.18
EBF1-201ENST00000313708 VSNL1P62760 191 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 KAT14Q9H8E8 782 aa13.91□□□□□ -0.18
EBF1-201ENST00000313708 LUC7LQ9NQ29 371 aaKnown RBP13.91□□□□□ -0.18
EBF1-201ENST00000313708 AFMP43652 599 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 LRRC23Q53EV4 343 aaPredicted RBP13.9□□□□□ -0.18
EBF1-201ENST00000313708 HSP90AB2PQ58FF8 381 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 PARP9Q8IXQ6 854 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 CDKL5O76039 1030 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 PNOCQ13519 176 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 SWT1Q5T5J6 900 aaKnown RBP13.9□□□□□ -0.18
EBF1-201ENST00000313708 NSRP1Q9H0G5 558 aaKnown RBP13.9□□□□□ -0.18
EBF1-201ENST00000313708 SKAP2O75563 359 aaPredicted RBP13.9□□□□□ -0.18
EBF1-201ENST00000313708 KRT83P78385 493 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 IQCB1Q15051 598 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 NBPF6Q5VWK0 638 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 NBPF5PQ86XG9 351 aaPredicted RBP13.9□□□□□ -0.18
EBF1-201ENST00000313708 ZBTB10Q96DT7 871 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 NBPF4Q96M43 638 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 UBAC1Q9BSL1 405 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 MAGI3Q5TCQ9 1506 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 ENC1O14682 589 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 CAPRIN2Q6IMN6 1127 aaKnown RBP13.9□□□□□ -0.18
EBF1-201ENST00000313708 C8orf74Q6P047 294 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 ZSWIM6Q9HCJ5 1215 aa13.9□□□□□ -0.18
EBF1-201ENST00000313708 SOWAHDA6NJG2 315 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 TACC1O75410 805 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 ZC3H6P61129 1189 aaKnown RBP13.89□□□□□ -0.19
EBF1-201ENST00000313708 DBN1Q16643 649 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 CYP26C1Q6V0L0 522 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 AIDAQ96BJ3 306 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 JPH4Q96JJ6 628 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 STK38LQ9Y2H1 464 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 IQUBQ8NA54 791 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 CDC5LQ99459 802 aaKnown RBP13.89□□□□□ -0.19
EBF1-201ENST00000313708 TSC22D3Q99576 134 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 KIF5AQ12840 1032 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 OTUD7BQ6GQQ9 843 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 RIN2Q8WYP3 895 aaPredicted RBP13.89□□□□□ -0.19
EBF1-201ENST00000313708 LSG1Q9H089 658 aaKnown RBP13.89□□□□□ -0.19
EBF1-201ENST00000313708 LRRD1A4D1F6 860 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 CRYMQ14894 314 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 GSPT2Q8IYD1 628 aaKnown RBP13.89□□□□□ -0.19
EBF1-201ENST00000313708 WDR66Q8TBY9 1149 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 PSMB7Q99436 277 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 OSBPL3Q9H4L5 887 aa13.89□□□□□ -0.19
EBF1-201ENST00000313708 SOS1Q07889 1333 aaPredicted RBP13.89□□□□□ -0.19
EBF1-201ENST00000313708 CCDC170Q8IYT3 715 aa13.88□□□□□ -0.19
EBF1-201ENST00000313708 PCDHA7Q9UN72 937 aa13.88□□□□□ -0.19
EBF1-201ENST00000313708 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.88□□□□□ -0.19
EBF1-201ENST00000313708 EIF4E1BA6NMX2 242 aaKnown RBP13.88□□□□□ -0.19
EBF1-201ENST00000313708 MAP3K9P80192 1104 aa13.88□□□□□ -0.19
EBF1-201ENST00000313708 CHST3Q7LGC8 479 aa13.88□□□□□ -0.19
EBF1-201ENST00000313708 PRAM1Q96QH2 718 aa13.88□□□□□ -0.19
EBF1-201ENST00000313708 TM6SF1Q9BZW5 370 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms