RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 IGSF3O75054 1194 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 TSPY3P0CV98 308 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 TSPY8P0CW00 308 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 IGSF22Q8N9C0 903 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 SLC4A4Q9Y6R1 1079 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 ANXA1P04083 346 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 ELF2Q15723 593 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 FERMT2Q96AC1 680 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 A0A1B0GUA9 196 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 FOXO3O43524 673 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 ATP2C2O75185 946 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 MLKLQ8NB16 471 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 RBM28Q9NW13 759 aaKnown RBP14.85□□□□□ -0.03
SNED1-201ENST00000310397 CCDC26Q8TAB7 109 aa14.85□□□□□ -0.03
SNED1-201ENST00000310397 ADGRL2O95490 1459 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 LMBR1LQ6UX01 489 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 HLA-DOAP06340 250 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 KRT13P13646 458 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 ABCC2Q92887 1545 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 WDHD1O75717 1129 aaPredicted RBP14.84□□□□□ -0.03
SNED1-201ENST00000310397 IFT74Q96LB3 600 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 VAT1LQ9HCJ6 419 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 KDM5CP41229 1560 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 GNA11P29992 359 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 ATP5DP30049 168 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 FANCCQ00597 558 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 ANO1Q5XXA6 986 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 TM6SF1Q9BZW5 370 aa14.84□□□□□ -0.03
SNED1-201ENST00000310397 IBTKQ9P2D0 1353 aaPredicted RBP14.83□□□□□ -0.03
SNED1-201ENST00000310397 BRD1O95696 1058 aa14.83□□□□□ -0.03
SNED1-201ENST00000310397 NUP58Q9BVL2 599 aa14.83□□□□□ -0.03
SNED1-201ENST00000310397 TMEM63CQ9P1W3 806 aa14.83□□□□□ -0.03
SNED1-201ENST00000310397 GOLGA6CA6NDK9 693 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 SLC27A2O14975 620 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 GOLGA6DP0CG33 693 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 ARHGAP25P42331 645 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 CEP128Q6ZU80 1094 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 IFT81Q8WYA0 676 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 GOLGA6AQ9NYA3 693 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 CYP7A1P22680 504 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 ZBTB16Q05516 673 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 NAA16Q6N069 864 aaPredicted RBP14.83□□□□□ -0.04
SNED1-201ENST00000310397 GPR161Q8N6U8 529 aaKnown RBP14.83□□□□□ -0.04
SNED1-201ENST00000310397 SYNMO15061 1565 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 ZNF202O95125 648 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 TMTC1Q8IUR5 882 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 RPGRQ92834 1020 aaKnown RBP14.83□□□□□ -0.04
SNED1-201ENST00000310397 SCLT1Q96NL6 688 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 HEATR3Q7Z4Q2 680 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 PAIP2Q9BPZ3 127 aaKnown RBP14.83□□□□□ -0.04
SNED1-201ENST00000310397 PA2G4Q9UQ80 394 aaKnown RBP14.83□□□□□ -0.04
SNED1-201ENST00000310397 MAP3K9P80192 1104 aa14.83□□□□□ -0.04
SNED1-201ENST00000310397 NDUFAB1O14561 156 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 FBLN1P23142 703 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 RPGRIP1Q96KN7 1286 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 PHACTR3Q96KR7 559 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 KCNH3Q9ULD8 1083 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 SNX14Q9Y5W7 946 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 TMEM87BQ96K49 555 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 TSNARE1Q96NA8 513 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 BCL2L12Q9HB09 334 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 STIM2Q9P246 746 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 CUTAO60888 179 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 LACTBP83111 547 aaPredicted RBP14.82□□□□□ -0.04
SNED1-201ENST00000310397 IFT20Q8IY31 132 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 STX17P56962 302 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 NLRP12P59046 1061 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 FBXO31Q5XUX0 539 aaPredicted RBP14.82□□□□□ -0.04
SNED1-201ENST00000310397 SMC6Q96SB8 1091 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 C6orf50Q9HD87 102 aa14.82□□□□□ -0.04
SNED1-201ENST00000310397 ADAMTS12P58397 1594 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 PPFIA1Q13136 1202 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 GRIPAP1Q4V328 841 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 VWA3BQ502W6 1294 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 CHST3Q7LGC8 479 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 MTUS1Q9ULD2 1270 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 NAPAP54920 295 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 SETDB1Q15047 1291 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 CROCCP2Q86T23 111 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 CARD6Q9BX69 1037 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 HOXB7P09629 217 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 INPP5BP32019 993 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 SYNRGQ9UMZ2 1314 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 FERP16591 822 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 KRT79Q5XKE5 535 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 BICC1Q9H694 974 aaKnown RBP14.81□□□□□ -0.04
SNED1-201ENST00000310397 ANGEL1Q9UNK9 670 aaKnown RBP14.81□□□□□ -0.04
SNED1-201ENST00000310397 SELENOSQ9BQE4 189 aa14.81□□□□□ -0.04
SNED1-201ENST00000310397 CCT6AP40227 531 aaKnown RBP14.8□□□□□ -0.04
SNED1-201ENST00000310397 ARID5AQ03989 594 aa14.8□□□□□ -0.04
SNED1-201ENST00000310397 BRD3Q15059 726 aa14.8□□□□□ -0.04
SNED1-201ENST00000310397 MTHFSDQ2M296 383 aaKnown RBP14.8□□□□□ -0.04
SNED1-201ENST00000310397 RUFY4Q6ZNE9 571 aa14.8□□□□□ -0.04
SNED1-201ENST00000310397 PLCD1P51178 756 aa14.8□□□□□ -0.04
SNED1-201ENST00000310397 C8orf74Q6P047 294 aa14.8□□□□□ -0.04
SNED1-201ENST00000310397 TRAPPC8Q9Y2L5 1435 aa14.8□□□□□ -0.04
SNED1-201ENST00000310397 UHRF1BP1LA0JNW5 1464 aa14.8□□□□□ -0.04
SNED1-201ENST00000310397 TRPM2O94759 1503 aa14.8□□□□□ -0.04
SNED1-201ENST00000310397 POLR2DO15514 142 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms