RNA–Protein interactions for RNA: ENST00000309859.8

GGA2-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGA2, Length 5,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-201ENST00000309859 TCP11Q8WWU5 503 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 SRGAP2O75044 1071 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 UBXN1Q04323 297 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 MYBL1P10243 752 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 SATB1Q01826 763 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 LSG1Q9H089 658 aaKnown RBP12.28□□□□□ -0.44
GGA2-201ENST00000309859 PAX7P23759 505 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 PCK1P35558 622 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 ZC3H6P61129 1189 aaKnown RBP12.28□□□□□ -0.44
GGA2-201ENST00000309859 UBE4AQ14139 1066 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 MTF1Q14872 753 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 SPECC1LQ69YQ0 1117 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 SMARCC2Q8TAQ2 1214 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 EEF2KMTQ96G04 330 aa12.28□□□□□ -0.44
GGA2-201ENST00000309859 VSNL1P62760 191 aa12.27□□□□□ -0.44
GGA2-201ENST00000309859 SLC7A5Q01650 507 aa12.27□□□□□ -0.44
GGA2-201ENST00000309859 UBLCP1Q8WVY7 318 aaPredicted RBP12.27□□□□□ -0.44
GGA2-201ENST00000309859 TAF4BQ92750 862 aa12.27□□□□□ -0.44
GGA2-201ENST00000309859 CLIC6Q96NY7 704 aa12.27□□□□□ -0.44
GGA2-201ENST00000309859 ALG1Q9BT22 464 aa12.27□□□□□ -0.44
GGA2-201ENST00000309859 IL25Q9H293 177 aa12.27□□□□□ -0.44
GGA2-201ENST00000309859 MED4Q9NPJ6 270 aa12.27□□□□□ -0.44
GGA2-201ENST00000309859 CDC23Q9UJX2 597 aa12.27□□□□□ -0.44
GGA2-201ENST00000309859 WDR7Q9Y4E6 1490 aa12.27□□□□□ -0.44
GGA2-201ENST00000309859 DDX58O95786 925 aaKnown RBP12.27□□□□□ -0.44
GGA2-201ENST00000309859 LRRC31Q6UY01 552 aa12.27□□□□□ -0.44
GGA2-201ENST00000309859 SPDL1Q96EA4 605 aa12.27□□□□□ -0.44
GGA2-201ENST00000309859 U3KPZ7 1027 aaPredicted RBP12.27□□□□□ -0.44
GGA2-201ENST00000309859 CORO7P57737 925 aa12.27□□□□□ -0.45
GGA2-201ENST00000309859 C1orf141Q5JVX7 400 aa12.27□□□□□ -0.45
GGA2-201ENST00000309859 SLC26A6Q9BXS9 759 aa12.27□□□□□ -0.45
GGA2-201ENST00000309859 PRPF4BQ13523 1007 aaKnown RBP12.27□□□□□ -0.45
GGA2-201ENST00000309859 TXNDC2Q86VQ3 553 aa12.27□□□□□ -0.45
GGA2-201ENST00000309859 SOS1Q07889 1333 aaPredicted RBP12.27□□□□□ -0.45
GGA2-201ENST00000309859 TMCO5BA8MYB1 307 aa12.27□□□□□ -0.45
GGA2-201ENST00000309859 PFKFB1P16118 471 aa12.27□□□□□ -0.45
GGA2-201ENST00000309859 C2orf54Q08AI8 447 aa12.27□□□□□ -0.45
GGA2-201ENST00000309859 CCDC170Q8IYT3 715 aa12.27□□□□□ -0.45
GGA2-201ENST00000309859 CCDC47Q96A33 483 aaKnown RBP12.27□□□□□ -0.45
GGA2-201ENST00000309859 GPATCH8Q9UKJ3 1502 aaKnown RBP12.27□□□□□ -0.45
GGA2-201ENST00000309859 KIF1CO43896 1103 aaKnown RBP12.26□□□□□ -0.45
GGA2-201ENST00000309859 ARID5AQ03989 594 aa12.26□□□□□ -0.45
GGA2-201ENST00000309859 BACH1O14867 736 aa12.26□□□□□ -0.45
GGA2-201ENST00000309859 VIMP08670 466 aaKnown RBP12.26□□□□□ -0.45
GGA2-201ENST00000309859 TTC39AQ5SRH9 613 aa12.26□□□□□ -0.45
GGA2-201ENST00000309859 DPF2Q92785 391 aa12.26□□□□□ -0.45
GGA2-201ENST00000309859 PLEKHF1Q96S99 279 aa12.26□□□□□ -0.45
GGA2-201ENST00000309859 FAM167BQ9BTA0 163 aa12.26□□□□□ -0.45
GGA2-201ENST00000309859 USO1O60763 962 aaKnown RBP12.26□□□□□ -0.45
GGA2-201ENST00000309859 TRHP20396 242 aaPredicted RBP12.26□□□□□ -0.45
GGA2-201ENST00000309859 SF3B2Q13435 895 aaKnown RBP12.26□□□□□ -0.45
GGA2-201ENST00000309859 SERPINA10Q9UK55 444 aa12.26□□□□□ -0.45
GGA2-201ENST00000309859 CTNND2Q9UQB3 1225 aa12.26□□□□□ -0.45
GGA2-201ENST00000309859 ELF1P32519 619 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 KIF5BP33176 963 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 PSMD2Q13200 908 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 PAIP2Q9BPZ3 127 aaKnown RBP12.25□□□□□ -0.45
GGA2-201ENST00000309859 SLC52A1Q9NWF4 448 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 TAB2Q9NYJ8 693 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 NPC1L1Q9UHC9 1359 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 POLR2DO15514 142 aaKnown RBP12.25□□□□□ -0.45
GGA2-201ENST00000309859 RBBP5Q15291 538 aaKnown RBP12.25□□□□□ -0.45
GGA2-201ENST00000309859 RPGRIP1LQ68CZ1 1315 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 NOS1P29475 1434 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 MBD5Q9P267 1494 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 TFRCP02786 760 aaKnown RBP12.25□□□□□ -0.45
GGA2-201ENST00000309859 SEPT11Q9NVA2 429 aaKnown RBP12.25□□□□□ -0.45
GGA2-201ENST00000309859 AKAP2Q9Y2D5 859 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 AKR1B10O60218 316 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 NEFHP12036 1026 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 VAV2P52735 878 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 TRIM22Q8IYM9 498 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 THOC1Q96FV9 657 aaKnown RBP12.25□□□□□ -0.45
GGA2-201ENST00000309859 GJB4Q9NTQ9 266 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 A0A0D9SFI3 127 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 KAT14Q9H8E8 782 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 ZSWIM6Q9HCJ5 1215 aa12.25□□□□□ -0.45
GGA2-201ENST00000309859 CXCR5P32302 372 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 MTIF2P46199 727 aaKnown RBP12.24□□□□□ -0.45
GGA2-201ENST00000309859 PLIN2Q99541 437 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 DONSONQ9NYP3 566 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 SMIM24O75264 130 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 GRAMD1CQ8IYS0 662 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 MAP3K2Q9Y2U5 619 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 FAM43BQ6ZT52 329 aaPredicted RBP12.24□□□□□ -0.45
GGA2-201ENST00000309859 CACNA2D4Q7Z3S7 1137 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 SIRT1Q96EB6 747 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 ALS2CR12Q96Q35 445 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 TRIM31Q9BZY9 425 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 KRT9P35527 623 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 PIP4K2AP48426 406 aaPredicted RBP12.24□□□□□ -0.45
GGA2-201ENST00000309859 PPFIA1Q13136 1202 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 FUT8Q9BYC5 575 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 ZHX3Q9H4I2 956 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 SBNO1A3KN83 1393 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 CWF19L2Q2TBE0 894 aaKnown RBP12.24□□□□□ -0.45
GGA2-201ENST00000309859 ANO1Q5XXA6 986 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 C8orf74Q6P047 294 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 HDAC6Q9UBN7 1215 aa12.24□□□□□ -0.45
GGA2-201ENST00000309859 SBNO2Q9Y2G9 1366 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms