RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 KARSQ15046 597 aaKnown RBP14.61□□□□□ -0.07
RETREG3-201ENST00000309428 CPLX2Q6PUV4 134 aaKnown RBP14.61□□□□□ -0.07
RETREG3-201ENST00000309428 ATG9AQ7Z3C6 839 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 PCMTD1Q96MG8 357 aaPredicted RBP14.61□□□□□ -0.07
RETREG3-201ENST00000309428 PCDH11XQ9BZA7 1347 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 PCDH11YQ9BZA8 1340 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 ZNF609O15014 1411 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 RANBP6O60518 1105 aaKnown RBP14.61□□□□□ -0.07
RETREG3-201ENST00000309428 FOXO4P98177 505 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 GOLGA8FQ08AF8 430 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 GOLGA8DPQ0D2H9 430 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 SENP2Q9HC62 589 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 HMG20BQ9P0W2 317 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 NIP7Q9Y221 180 aaKnown RBP eCLIP14.61□□□□□ -0.07
RETREG3-201ENST00000309428 COBLO75128 1261 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 TMEM67Q5HYA8 995 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 AXDND1Q5T1B0 1012 aaPredicted RBP14.61□□□□□ -0.07
RETREG3-201ENST00000309428 CLEC17AQ6ZS10 378 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 UTP14AQ9BVJ6 771 aaKnown RBP14.61□□□□□ -0.07
RETREG3-201ENST00000309428 WWC3Q9ULE0 1092 aa14.61□□□□□ -0.07
RETREG3-201ENST00000309428 MBD4O95243 580 aa14.6□□□□□ -0.07
RETREG3-201ENST00000309428 BCAMP50895 628 aa14.6□□□□□ -0.07
RETREG3-201ENST00000309428 KCNJ14Q9UNX9 436 aa14.6□□□□□ -0.07
RETREG3-201ENST00000309428 USP27XA6NNY8 438 aa14.6□□□□□ -0.07
RETREG3-201ENST00000309428 C11orf57Q6ZUT1 292 aaPredicted RBP14.6□□□□□ -0.07
RETREG3-201ENST00000309428 SDR42E1Q8WUS8 393 aa14.6□□□□□ -0.07
RETREG3-201ENST00000309428 AK7Q96M32 723 aa14.6□□□□□ -0.07
RETREG3-201ENST00000309428 CLIC4Q9Y696 253 aa14.6□□□□□ -0.07
RETREG3-201ENST00000309428 PIK3C2AO00443 1686 aa14.6□□□□□ -0.07
RETREG3-201ENST00000309428 RFX5P48382 616 aaPredicted RBP14.6□□□□□ -0.07
RETREG3-201ENST00000309428 CARD6Q9BX69 1037 aa14.6□□□□□ -0.07
RETREG3-201ENST00000309428 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.6□□□□□ -0.07
RETREG3-201ENST00000309428 ANKARQ7Z5J8 1434 aa14.6□□□□□ -0.07
RETREG3-201ENST00000309428 ZNF532Q9HCE3 1301 aa14.6□□□□□ -0.07
RETREG3-201ENST00000309428 METAP2P50579 478 aaKnown RBP eCLIP14.59□□□□□ -0.07
RETREG3-201ENST00000309428 TCIRG1Q13488 830 aa14.59□□□□□ -0.07
RETREG3-201ENST00000309428 STAMQ92783 540 aa14.59□□□□□ -0.07
RETREG3-201ENST00000309428 CLIC6Q96NY7 704 aa14.59□□□□□ -0.07
RETREG3-201ENST00000309428 ALG1Q9BT22 464 aa14.59□□□□□ -0.07
RETREG3-201ENST00000309428 KDM6AO15550 1401 aaPredicted RBP14.59□□□□□ -0.07
RETREG3-201ENST00000309428 CYP2D7A0A087X1C5 515 aa14.59□□□□□ -0.07
RETREG3-201ENST00000309428 GOLGA8AA7E2F4 631 aa14.59□□□□□ -0.07
RETREG3-201ENST00000309428 SAMD1Q6SPF0 538 aaPredicted RBP14.59□□□□□ -0.07
RETREG3-201ENST00000309428 GPIHBP1Q8IV16 184 aa14.59□□□□□ -0.07
RETREG3-201ENST00000309428 NSUN7Q8NE18 718 aaKnown RBP14.59□□□□□ -0.07
RETREG3-201ENST00000309428 CWC15Q9P013 229 aaKnown RBP14.59□□□□□ -0.07
RETREG3-201ENST00000309428 MON2Q7Z3U7 1717 aa14.59□□□□□ -0.07
RETREG3-201ENST00000309428 C1orf167Q5SNV9 1468 aa14.59□□□□□ -0.07
RETREG3-201ENST00000309428 COL15A1P39059 1388 aa14.59□□□□□ -0.07
RETREG3-201ENST00000309428 PDIA3P30101 505 aaKnown RBP14.58□□□□□ -0.07
RETREG3-201ENST00000309428 AKAP17AQ02040 695 aaKnown RBP14.58□□□□□ -0.07
RETREG3-201ENST00000309428 CCDC191Q8NCU4 936 aa14.58□□□□□ -0.07
RETREG3-201ENST00000309428 UIMC1Q96RL1 719 aa14.58□□□□□ -0.07
RETREG3-201ENST00000309428 SRRTQ9BXP5 876 aaKnown RBP14.58□□□□□ -0.07
RETREG3-201ENST00000309428 PUF60Q9UHX1 559 aaKnown RBP14.58□□□□□ -0.07
RETREG3-201ENST00000309428 AKAP2Q9Y2D5 859 aa14.58□□□□□ -0.07
RETREG3-201ENST00000309428 PATL2C9JE40 543 aaKnown RBP14.58□□□□□ -0.08
RETREG3-201ENST00000309428 SMIM22K7EJ46 135 aa14.58□□□□□ -0.08
RETREG3-201ENST00000309428 UBASH3AP57075 661 aa14.58□□□□□ -0.08
RETREG3-201ENST00000309428 PPARDQ03181 441 aa14.58□□□□□ -0.08
RETREG3-201ENST00000309428 NCOA7Q8NI08 942 aa14.58□□□□□ -0.08
RETREG3-201ENST00000309428 NOC3LQ8WTT2 800 aaKnown RBP14.58□□□□□ -0.08
RETREG3-201ENST00000309428 TM6SF1Q9BZW5 370 aa14.58□□□□□ -0.08
RETREG3-201ENST00000309428 RABEP2Q9H5N1 569 aa14.58□□□□□ -0.08
RETREG3-201ENST00000309428 TPM1P09493 284 aa14.58□□□□□ -0.08
RETREG3-201ENST00000309428 KIF4BQ2VIQ3 1234 aa14.58□□□□□ -0.08
RETREG3-201ENST00000309428 CCDC144BQ3MJ40 725 aa14.58□□□□□ -0.08
RETREG3-201ENST00000309428 CCDC12Q8WUD4 166 aaPredicted RBP14.58□□□□□ -0.08
RETREG3-201ENST00000309428 MCAMP43121 646 aa14.57□□□□□ -0.08
RETREG3-201ENST00000309428 CLSTN2Q9H4D0 955 aa14.57□□□□□ -0.08
RETREG3-201ENST00000309428 TFCP2L1Q9NZI6 479 aa14.57□□□□□ -0.08
RETREG3-201ENST00000309428 GYG1P46976 350 aa14.57□□□□□ -0.08
RETREG3-201ENST00000309428 ZNF827Q17R98 1081 aa14.57□□□□□ -0.08
RETREG3-201ENST00000309428 SLC4A4Q9Y6R1 1079 aa14.57□□□□□ -0.08
RETREG3-201ENST00000309428 ERICH2A1L162 156 aa14.57□□□□□ -0.08
RETREG3-201ENST00000309428 SEC31AO94979 1220 aaKnown RBP14.57□□□□□ -0.08
RETREG3-201ENST00000309428 CASQ1P31415 396 aa14.57□□□□□ -0.08
RETREG3-201ENST00000309428 UTP14CQ5TAP6 766 aaKnown RBP14.57□□□□□ -0.08
RETREG3-201ENST00000309428 EPC1Q9H2F5 836 aa14.57□□□□□ -0.08
RETREG3-201ENST00000309428 CTNNA3Q9UI47 895 aa14.57□□□□□ -0.08
RETREG3-201ENST00000309428 FBXO38Q6PIJ6 1188 aa14.56□□□□□ -0.08
RETREG3-201ENST00000309428 KRBA2Q6ZNG9 492 aa14.56□□□□□ -0.08
RETREG3-201ENST00000309428 GOLPH3LQ9H4A5 285 aa14.56□□□□□ -0.08
RETREG3-201ENST00000309428 LZTFL1Q9NQ48 299 aa14.56□□□□□ -0.08
RETREG3-201ENST00000309428 PIH1D3Q9NQM4 214 aaKnown RBP14.56□□□□□ -0.08
RETREG3-201ENST00000309428 SPATA31A3Q5VYP0 1347 aa14.56□□□□□ -0.08
RETREG3-201ENST00000309428 HEG1Q9ULI3 1381 aa14.56□□□□□ -0.08
RETREG3-201ENST00000309428 H7C1W4 665 aa14.56□□□□□ -0.08
RETREG3-201ENST00000309428 LRRFIP1Q32MZ4 808 aaKnown RBP14.56□□□□□ -0.08
RETREG3-201ENST00000309428 GPATCH11Q8N954 259 aa14.56□□□□□ -0.08
RETREG3-201ENST00000309428 CAGE1Q8TC20 777 aa14.56□□□□□ -0.08
RETREG3-201ENST00000309428 SLC12A7Q9Y666 1083 aa14.56□□□□□ -0.08
RETREG3-201ENST00000309428 GYS2P54840 703 aa14.56□□□□□ -0.08
RETREG3-201ENST00000309428 TSR1Q2NL82 804 aaKnown RBP14.56□□□□□ -0.08
RETREG3-201ENST00000309428 ERO1AQ96HE7 468 aa14.56□□□□□ -0.08
RETREG3-201ENST00000309428 EVCP57679 992 aa14.55□□□□□ -0.08
RETREG3-201ENST00000309428 GSDMDP57764 484 aa14.55□□□□□ -0.08
RETREG3-201ENST00000309428 CCDC102BQ68D86 513 aa14.55□□□□□ -0.08
RETREG3-201ENST00000309428 LRRC8AQ8IWT6 810 aa14.55□□□□□ -0.08
RETREG3-201ENST00000309428 EEF2KMTQ96G04 330 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms