RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 SIRT2Q8IXJ6 389 aa24.28■■□□□ 1.48
VEGFB-201ENST00000309422 SPATA5Q8NB90 893 aa24.28■■□□□ 1.48
VEGFB-201ENST00000309422 DBNDD2Q9BQY9 259 aa24.28■■□□□ 1.48
VEGFB-201ENST00000309422 LRRCC1Q9C099 1032 aa24.28■■□□□ 1.48
VEGFB-201ENST00000309422 VEZTQ9HBM0 779 aa24.28■■□□□ 1.48
VEGFB-201ENST00000309422 TRAF5O00463 557 aa24.27■■□□□ 1.48
VEGFB-201ENST00000309422 ARID4AP29374 1257 aaPredicted RBP24.27■■□□□ 1.48
VEGFB-201ENST00000309422 CCDC8Q9H0W5 538 aaPredicted RBP24.27■■□□□ 1.48
VEGFB-201ENST00000309422 IL1RAPL2Q9NP60 686 aa24.27■■□□□ 1.48
VEGFB-201ENST00000309422 ADM5C9JUS6 153 aa24.26■■□□□ 1.47
VEGFB-201ENST00000309422 COL1A1P02452 1464 aaPredicted RBP24.25■■□□□ 1.47
VEGFB-201ENST00000309422 TNNI2P48788 182 aa24.25■■□□□ 1.47
VEGFB-201ENST00000309422 ERICH6Q7L0X2 663 aa24.25■■□□□ 1.47
VEGFB-201ENST00000309422 ZNF646O15015 1829 aaPredicted RBP24.25■■□□□ 1.47
VEGFB-201ENST00000309422 MYH13Q9UKX3 1938 aa24.25■■□□□ 1.47
VEGFB-201ENST00000309422 EAF2Q96CJ1 260 aaPredicted RBP24.24■■□□□ 1.47
VEGFB-201ENST00000309422 DBNLQ9UJU6 430 aaKnown RBP24.24■■□□□ 1.47
VEGFB-201ENST00000309422 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.24■■□□□ 1.47
VEGFB-201ENST00000309422 ASTN2O75129 1339 aaPredicted RBP24.23■■□□□ 1.47
VEGFB-201ENST00000309422 CLRN2A0PK11 232 aa24.23■■□□□ 1.47
VEGFB-201ENST00000309422 GSTO1P78417 241 aa24.23■■□□□ 1.47
VEGFB-201ENST00000309422 PAXIP1Q6ZW49 1069 aaPredicted RBP24.23■■□□□ 1.47
VEGFB-201ENST00000309422 GPATCH3Q96I76 525 aa24.23■■□□□ 1.47
VEGFB-201ENST00000309422 HMG20BQ9P0W2 317 aa24.23■■□□□ 1.47
VEGFB-201ENST00000309422 LRP2BPQ9P2M1 347 aa24.23■■□□□ 1.47
VEGFB-201ENST00000309422 PPP2R3BQ9Y5P8 575 aa24.23■■□□□ 1.47
VEGFB-201ENST00000309422 PRDX5P30044 214 aa24.22■■□□□ 1.47
VEGFB-201ENST00000309422 HHIPL2Q6UWX4 724 aa24.22■■□□□ 1.47
VEGFB-201ENST00000309422 C2orf69Q8N8R5 385 aa24.22■■□□□ 1.47
VEGFB-201ENST00000309422 CDCA5Q96FF9 252 aa24.22■■□□□ 1.47
VEGFB-201ENST00000309422 ZNF512BQ96KM6 892 aaPredicted RBP24.22■■□□□ 1.47
VEGFB-201ENST00000309422 NOL10Q9BSC4 688 aaKnown RBP24.22■■□□□ 1.47
VEGFB-201ENST00000309422 MRIQ9BWK5 157 aa24.22■■□□□ 1.47
VEGFB-201ENST00000309422 RAI14Q9P0K7 980 aa24.22■■□□□ 1.47
VEGFB-201ENST00000309422 ZBED3Q96IU2 234 aaPredicted RBP24.21■■□□□ 1.47
VEGFB-201ENST00000309422 PRMT6Q96LA8 375 aaPredicted RBP24.21■■□□□ 1.47
VEGFB-201ENST00000309422 ZDHHC15Q96MV8 337 aa24.21■■□□□ 1.47
VEGFB-201ENST00000309422 MCAMP43121 646 aa24.2■■□□□ 1.46
VEGFB-201ENST00000309422 TLR7Q9NYK1 1049 aaKnown RBP24.2■■□□□ 1.46
VEGFB-201ENST00000309422 IGSF3O75054 1194 aa24.19■■□□□ 1.46
VEGFB-201ENST00000309422 LDHCP07864 332 aa24.19■■□□□ 1.46
VEGFB-201ENST00000309422 HTRA3P83110 453 aa24.19■■□□□ 1.46
VEGFB-201ENST00000309422 TTLL12Q14166 644 aaPredicted RBP24.19■■□□□ 1.46
VEGFB-201ENST00000309422 SPDYE2Q495Y8 402 aa24.19■■□□□ 1.46
VEGFB-201ENST00000309422 DCTPP1Q9H773 170 aa24.19■■□□□ 1.46
VEGFB-201ENST00000309422 GRIK5Q16478 980 aa24.18■■□□□ 1.46
VEGFB-201ENST00000309422 TDRD3Q9H7E2 651 aaKnown RBP24.18■■□□□ 1.46
VEGFB-201ENST00000309422 GBA2Q9HCG7 927 aaPredicted RBP24.18■■□□□ 1.46
VEGFB-201ENST00000309422 ZNF70Q9UC06 446 aaPredicted RBP24.18■■□□□ 1.46
VEGFB-201ENST00000309422 PCDHB15Q9Y5E8 787 aa24.18■■□□□ 1.46
VEGFB-201ENST00000309422 DEFB129Q9H1M3 183 aa24.17■■□□□ 1.46
VEGFB-201ENST00000309422 SNRKQ9NRH2 765 aa24.17■■□□□ 1.46
VEGFB-201ENST00000309422 MKRN1Q9UHC7 482 aaKnown RBP24.17■■□□□ 1.46
VEGFB-201ENST00000309422 ECE1P42892 770 aa24.16■■□□□ 1.46
VEGFB-201ENST00000309422 FKBP1BP68106 108 aa24.16■■□□□ 1.46
VEGFB-201ENST00000309422 TTF1Q15361 905 aaPredicted RBP24.16■■□□□ 1.46
VEGFB-201ENST00000309422 DIXDC1Q155Q3 683 aa24.16■■□□□ 1.46
VEGFB-201ENST00000309422 SUPT20HL1Q3ZLR7 823 aa24.16■■□□□ 1.46
VEGFB-201ENST00000309422 PI16Q6UXB8 463 aa24.16■■□□□ 1.46
VEGFB-201ENST00000309422 GCC1Q96CN9 775 aa24.16■■□□□ 1.46
VEGFB-201ENST00000309422 KLRG1Q96E93 195 aa24.16■■□□□ 1.46
VEGFB-201ENST00000309422 RWDD1Q9H446 243 aaPredicted RBP24.16■■□□□ 1.46
VEGFB-201ENST00000309422 PCDHAC2Q9Y5I4 1007 aa24.16■■□□□ 1.46
VEGFB-201ENST00000309422 TLL2Q9Y6L7 1015 aa24.16■■□□□ 1.46
VEGFB-201ENST00000309422 FMR1Q06787 632 aaKnown RBP eCLIP24.16■■□□□ 1.46
VEGFB-201ENST00000309422 DEFB115Q30KQ5 88 aa24.16■■□□□ 1.46
VEGFB-201ENST00000309422 DAGLAQ9Y4D2 1042 aa24.16■■□□□ 1.46
VEGFB-201ENST00000309422 TCP10L2B9ZVM9 353 aa24.15■■□□□ 1.46
VEGFB-201ENST00000309422 HUNKP57058 714 aa24.15■■□□□ 1.46
VEGFB-201ENST00000309422 HDAC1Q13547 482 aaPredicted RBP24.15■■□□□ 1.46
VEGFB-201ENST00000309422 CST9Q5W186 159 aa24.15■■□□□ 1.46
VEGFB-201ENST00000309422 EXOC6Q8TAG9 804 aa24.15■■□□□ 1.46
VEGFB-201ENST00000309422 HOOK2Q96ED9 719 aa24.15■■□□□ 1.46
VEGFB-201ENST00000309422 SCAF8Q9UPN6 1271 aaKnown RBP24.15■■□□□ 1.46
VEGFB-201ENST00000309422 CNTNAP1P78357 1384 aa24.14■■□□□ 1.46
VEGFB-201ENST00000309422 RASSF10A6NK89 507 aa24.14■■□□□ 1.45
VEGFB-201ENST00000309422 ZAP70P43403 619 aa24.14■■□□□ 1.45
VEGFB-201ENST00000309422 MECOMQ03112 1051 aa24.14■■□□□ 1.45
VEGFB-201ENST00000309422 NAA16Q6N069 864 aaPredicted RBP24.14■■□□□ 1.45
VEGFB-201ENST00000309422 TBC1D9Q6ZT07 1266 aa24.14■■□□□ 1.45
VEGFB-201ENST00000309422 ARMC9Q7Z3E5 817 aa24.14■■□□□ 1.45
VEGFB-201ENST00000309422 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.14■■□□□ 1.45
VEGFB-201ENST00000309422 DNAJC2Q99543 621 aaKnown RBP24.14■■□□□ 1.45
VEGFB-201ENST00000309422 MROH7-TTC4A0A0A0MT08 1334 aa24.14■■□□□ 1.45
VEGFB-201ENST00000309422 PPP1R12BO60237 982 aaPredicted RBP24.13■■□□□ 1.45
VEGFB-201ENST00000309422 IDH1O75874 414 aaKnown RBP24.13■■□□□ 1.45
VEGFB-201ENST00000309422 MAP3K12Q12852 859 aa24.13■■□□□ 1.45
VEGFB-201ENST00000309422 GRM1Q13255 1194 aa24.13■■□□□ 1.45
VEGFB-201ENST00000309422 RASA3Q14644 834 aa24.13■■□□□ 1.45
VEGFB-201ENST00000309422 APOBEC3HQ6NTF7 200 aaKnown RBP24.13■■□□□ 1.45
VEGFB-201ENST00000309422 SMARCA5O60264 1052 aaPredicted RBP24.12■■□□□ 1.45
VEGFB-201ENST00000309422 BAG3O95817 575 aa24.12■■□□□ 1.45
VEGFB-201ENST00000309422 FKBP1CQ5VVH2 108 aa24.12■■□□□ 1.45
VEGFB-201ENST00000309422 TMED8Q6PL24 325 aaPredicted RBP24.12■■□□□ 1.45
VEGFB-201ENST00000309422 SAPCD2Q86UD0 394 aa24.12■■□□□ 1.45
VEGFB-201ENST00000309422 HHIPL1Q96JK4 782 aa24.12■■□□□ 1.45
VEGFB-201ENST00000309422 TRPM7Q96QT4 1865 aa24.11■■□□□ 1.45
VEGFB-201ENST00000309422 GAKO14976 1311 aa24.11■■□□□ 1.45
VEGFB-201ENST00000309422 BTDP43251 543 aa24.11■■□□□ 1.45
VEGFB-201ENST00000309422 USP40Q9NVE5 1235 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms