RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 PTPN14Q15678 1187 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 HLFQ16534 295 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 KLHL10Q6JEL2 608 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 NAA16Q6N069 864 aaPredicted RBP12.36□□□□□ -0.43
MUC4-201ENST00000308466 UTP14AQ9BVJ6 771 aaKnown RBP12.36□□□□□ -0.43
MUC4-201ENST00000308466 ZNF652Q9Y2D9 606 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 SFPQP23246 707 aaKnown RBP eCLIP12.36□□□□□ -0.43
MUC4-201ENST00000308466 LRMPQ12912 555 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 WTAPQ15007 396 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 AMOTL1Q8IY63 956 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 TMEM87AQ8NBN3 555 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 ANGEL1Q9UNK9 670 aaKnown RBP12.36□□□□□ -0.43
MUC4-201ENST00000308466 VIRMAQ69YN4 1812 aaKnown RBP12.36□□□□□ -0.43
MUC4-201ENST00000308466 SMTNL1A8MU46 457 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 RFX5P48382 616 aaPredicted RBP12.36□□□□□ -0.43
MUC4-201ENST00000308466 CTDSPL2Q05D32 466 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 COL9A3Q14050 684 aaPredicted RBP12.36□□□□□ -0.43
MUC4-201ENST00000308466 RABL6Q3YEC7 729 aaPredicted RBP12.36□□□□□ -0.43
MUC4-201ENST00000308466 GIGYF2Q6Y7W6 1299 aaKnown RBP12.36□□□□□ -0.43
MUC4-201ENST00000308466 STOX1Q6ZVD7 989 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 ATG9AQ7Z3C6 839 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 WASF1Q92558 559 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 JAG2Q9Y219 1238 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 PEAK1Q9H792 1746 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 SH3TC1Q8TE82 1336 aa12.36□□□□□ -0.43
MUC4-201ENST00000308466 A0A0G2JLW4 131 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 CAVIN2O95810 425 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 SKILP12757 684 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 CTSWP56202 376 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 MRVI1Q9Y6F6 885 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 SLIT1O75093 1534 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 G3V3G9 751 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 DCAF8Q5TAQ9 597 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 CCDC102BQ68D86 513 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 ZNF274Q96GC6 653 aaPredicted RBP12.35□□□□□ -0.43
MUC4-201ENST00000308466 CCDC196A0A1B0GTZ2 297 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 SCARF1Q14162 830 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 CCDC24Q8N4L8 307 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 CDC5LQ99459 802 aaKnown RBP12.35□□□□□ -0.43
MUC4-201ENST00000308466 GPR108Q9NPR9 543 aa12.35□□□□□ -0.43
MUC4-201ENST00000308466 SPECC1Q5M775 1068 aa12.34□□□□□ -0.43
MUC4-201ENST00000308466 NRBP1Q9UHY1 535 aa12.34□□□□□ -0.43
MUC4-201ENST00000308466 UTYO14607 1347 aa12.34□□□□□ -0.43
MUC4-201ENST00000308466 ZNF335Q9H4Z2 1342 aaPredicted RBP12.34□□□□□ -0.43
MUC4-201ENST00000308466 PUM3Q15397 648 aaKnown RBP12.34□□□□□ -0.43
MUC4-201ENST00000308466 MAP3K15Q6ZN16 1313 aa12.34□□□□□ -0.43
MUC4-201ENST00000308466 ZNF75DP51815 510 aa12.34□□□□□ -0.43
MUC4-201ENST00000308466 RESTQ13127 1097 aa12.34□□□□□ -0.43
MUC4-201ENST00000308466 RTN1Q16799 776 aa12.34□□□□□ -0.43
MUC4-201ENST00000308466 IQCA1Q86XH1 822 aa12.34□□□□□ -0.43
MUC4-201ENST00000308466 PGBD1Q96JS3 809 aa12.34□□□□□ -0.43
MUC4-201ENST00000308466 PRIMPOLQ96LW4 560 aa12.34□□□□□ -0.43
MUC4-201ENST00000308466 RNF41Q9H4P4 317 aaPredicted RBP12.34□□□□□ -0.43
MUC4-201ENST00000308466 MARCH6O60337 910 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 NLRP10Q86W26 655 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 CNPY4Q8N129 248 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 CMTR1Q8N1G2 835 aaKnown RBP12.33□□□□□ -0.44
MUC4-201ENST00000308466 PRDM1O75626 825 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 CIAO1O76071 339 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 PDE8BO95263 885 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 PDE6AP16499 860 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 ANO1Q5XXA6 986 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 ANKRD18AQ8IVF6 992 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 MNS1Q8NEH6 495 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 LPIN2Q92539 896 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 PYCARDQ9ULZ3 195 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 IFNKQ9P0W0 207 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 PCDHA7Q9UN72 937 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 ELP1O95163 1332 aa12.33□□□□□ -0.44
MUC4-201ENST00000308466 ZNF609O15014 1411 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 TPM1P09493 284 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 GTF2F1P35269 517 aaKnown RBP eCLIP12.32□□□□□ -0.44
MUC4-201ENST00000308466 BRAPQ7Z569 592 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 SPATA5Q8NB90 893 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 TTLL11Q8NHH1 800 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 AIFM3Q96NN9 605 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 KRT23Q9C075 422 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 CLIC4Q9Y696 253 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 BCAMP50895 628 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 MYSM1Q5VVJ2 828 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 KRT40Q6A162 431 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 NGLY1Q96IV0 654 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 SEC31BQ9NQW1 1179 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 hCG_1642624A0A1W2PR95 340 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 ZNF202O95125 648 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 KNDC1Q76NI1 1749 aa12.32□□□□□ -0.44
MUC4-201ENST00000308466 ZPR1O75312 459 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 IRX5P78411 483 aaPredicted RBP12.31□□□□□ -0.44
MUC4-201ENST00000308466 FBXO18Q8NFZ0 1043 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 INCENPQ9NQS7 918 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 WWC3Q9ULE0 1092 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 TERF1P54274 439 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 KCNQ4P56696 695 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 ATL3Q6DD88 541 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 CATIPQ7Z7H3 387 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 ATG3Q9NT62 314 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 CALCOCO1Q9P1Z2 691 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 KCNJ14Q9UNX9 436 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 MCAMP43121 646 aa12.31□□□□□ -0.44
MUC4-201ENST00000308466 ST3GAL1Q11201 340 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms