RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 GCC1Q96CN9 775 aa13.45□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 GPATCH3Q96I76 525 aa13.45□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 SERPINA10Q9UK55 444 aa13.45□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 WNT10BO00744 389 aa13.44□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 SMARCA5O60264 1052 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 NEFLP07196 543 aa13.44□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 SCARF1Q14162 830 aa13.44□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 SULF1Q8IWU6 871 aa13.44□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 TEKT1Q969V4 418 aa13.44□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 ZNF512BQ96KM6 892 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 HMG20BQ9P0W2 317 aa13.44□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 PITPNM2Q9BZ72 1349 aa13.43□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 PRDX5P30044 214 aa13.43□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 CRKP46108 304 aa13.43□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 HDLBPQ00341 1268 aaKnown RBP13.43□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 ANGEL2Q5VTE6 544 aaKnown RBP13.43□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 ERICH6Q7L0X2 663 aa13.43□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 CDC37L1Q7L3B6 337 aa13.43□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 APOBEC3FQ8IUX4 373 aaKnown RBP13.43□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 SLF2Q8IX21 1173 aa13.43□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 MTMR14Q8NCE2 650 aa13.43□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 GRIK5Q16478 980 aa13.42□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 NBPF9Q3BBW0 867 aa13.42□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 PI16Q6UXB8 463 aa13.42□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 KRT26Q7Z3Y9 468 aa13.42□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 SNRKQ9NRH2 765 aa13.42□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 TMOD2Q9NZR1 351 aa13.42□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 LRP2BPQ9P2M1 347 aa13.42□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 PGAP2Q9UHJ9 254 aa13.42□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 HSPA6P17066 643 aa13.41□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 ZAP70P43403 619 aa13.41□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 GSTO1P78417 241 aa13.41□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 ANKRD45Q5TZF3 282 aa13.41□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.41□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 GLIS2Q9BZE0 524 aaPredicted RBP13.41□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 VEZTQ9HBM0 779 aa13.41□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 RAI14Q9P0K7 980 aa13.41□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 ASTN2O75129 1339 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 CLRN2A0PK11 232 aa13.4□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 APLP1P51693 650 aa13.4□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 TNFAIP1Q13829 316 aa13.4□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 TTF1Q15361 905 aaPredicted RBP13.4□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 HHIPL2Q6UWX4 724 aa13.4□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 USP48Q86UV5 1035 aa13.4□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 ZDHHC15Q96MV8 337 aa13.4□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 DNAJC2Q99543 621 aaKnown RBP13.4□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 MRIQ9BWK5 157 aa13.4□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 ZNF408Q9H9D4 720 aa13.4□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 CDK5RAP2Q96SN8 1893 aa13.4□□□□□ -0.26
CSPG4P2Y-201ENST00000306853 PASKQ96RG2 1323 aa13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 FOCADQ5VW36 1801 aa13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 ADM5C9JUS6 153 aa13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 ITGBL1O95965 494 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 CYP2E1P05181 493 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 DIXDC1Q155Q3 683 aa13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 TBC1D9Q6ZT07 1266 aa13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 ZBED3Q96IU2 234 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 PRMT6Q96LA8 375 aaPredicted RBP13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 NOL10Q9BSC4 688 aaKnown RBP13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 ECHDC1Q9NTX5 307 aa13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 PCDHAC2Q9Y5I4 1007 aa13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 MROH7-TTC4A0A0A0MT08 1334 aa13.39□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 PAPPA2Q9BXP8 1791 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 TRAF5O00463 557 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 ERC2O15083 957 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 IGSF3O75054 1194 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 IDH1O75874 414 aaKnown RBP13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 LDHCP07864 332 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 ATP5JP18859 108 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 NF2P35240 595 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 TNNI2P48788 182 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 MECOMQ03112 1051 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 BOLA2Q9H3K6 86 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 TDRD3Q9H7E2 651 aaKnown RBP13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 DAGLAQ9Y4D2 1042 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 PPP2R3BQ9Y5P8 575 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 TTC41PQ6P2S7 1318 aa13.38□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 TMEM88BA6NKF7 163 aa13.37□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 CELF2O95319 508 aaKnown RBP13.37□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 IGHDP01880 384 aa13.37□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 MAP3K12Q12852 859 aa13.37□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 B4GALNT3Q6L9W6 998 aa13.37□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 NAA16Q6N069 864 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 SMC5Q8IY18 1101 aa13.37□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 NSUN4Q96CB9 384 aaKnown RBP13.37□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 CREBZFQ9NS37 354 aa13.37□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 ZNF70Q9UC06 446 aaPredicted RBP13.37□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 NDUFB9Q9Y6M9 179 aa13.37□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 GAKO14976 1311 aa13.37□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 GOLIM4O00461 696 aa13.36□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 MX1P20591 662 aa13.36□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 BTDP43251 543 aa13.36□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 CDCA5Q96FF9 252 aa13.36□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 HAUS7Q99871 368 aa13.36□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 LNPKQ9C0E8 428 aa13.36□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 PIH1D3Q9NQM4 214 aaKnown RBP13.36□□□□□ -0.27
CSPG4P2Y-201ENST00000306853 PAG1Q9NWQ8 432 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms