RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 PLIN1O60240 522 aa12.88□□□□□ -0.35
COL4A3-201ENST00000304990 TLR2O60603 784 aa12.88□□□□□ -0.35
COL4A3-201ENST00000304990 HOXD10P28358 340 aa12.88□□□□□ -0.35
COL4A3-201ENST00000304990 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
COL4A3-201ENST00000304990 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.88□□□□□ -0.35
COL4A3-201ENST00000304990 C8orf58Q8NAV2 365 aa12.88□□□□□ -0.35
COL4A3-201ENST00000304990 TTF2Q9UNY4 1162 aaKnown RBP12.88□□□□□ -0.35
COL4A3-201ENST00000304990 AOX1Q06278 1338 aa12.88□□□□□ -0.35
COL4A3-201ENST00000304990 SNAP23O00161 211 aa12.87□□□□□ -0.35
COL4A3-201ENST00000304990 FMNL1O95466 1100 aaPredicted RBP12.87□□□□□ -0.35
COL4A3-201ENST00000304990 IL1R1P14778 569 aa12.87□□□□□ -0.35
COL4A3-201ENST00000304990 MTFR1Q15390 333 aa12.87□□□□□ -0.35
COL4A3-201ENST00000304990 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
COL4A3-201ENST00000304990 MYH16Q9H6N6 1097 aa12.87□□□□□ -0.35
COL4A3-201ENST00000304990 ADAMTS8Q9UP79 889 aa12.87□□□□□ -0.35
COL4A3-201ENST00000304990 MYBBP1AQ9BQG0 1328 aaKnown RBP12.87□□□□□ -0.35
COL4A3-201ENST00000304990 HTTP42858 3142 aa12.86□□□□□ -0.35
COL4A3-201ENST00000304990 TRIOBPQ9H2D6 2365 aa12.86□□□□□ -0.35
COL4A3-201ENST00000304990 CENPFP49454 3210 aa12.86□□□□□ -0.35
COL4A3-201ENST00000304990 ZNF853P0CG23 659 aa12.86□□□□□ -0.35
COL4A3-201ENST00000304990 UBXN2AP68543 259 aa12.86□□□□□ -0.35
COL4A3-201ENST00000304990 IFIT5Q13325 482 aaKnown RBP12.86□□□□□ -0.35
COL4A3-201ENST00000304990 SNAPC2Q13487 334 aa12.86□□□□□ -0.35
COL4A3-201ENST00000304990 MFSD14BQ5SR56 506 aa12.86□□□□□ -0.35
COL4A3-201ENST00000304990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.86□□□□□ -0.35
COL4A3-201ENST00000304990 SHISA4Q96DD7 197 aa12.86□□□□□ -0.35
COL4A3-201ENST00000304990 TRIM47Q96LD4 638 aa12.86□□□□□ -0.35
COL4A3-201ENST00000304990 TMEM39BQ9GZU3 492 aa12.86□□□□□ -0.35
COL4A3-201ENST00000304990 RNF208Q9H0X6 261 aa12.86□□□□□ -0.35
COL4A3-201ENST00000304990 SPDYE5A6NIY4 337 aa12.85□□□□□ -0.35
COL4A3-201ENST00000304990 BTBD19C9JJ37 291 aa12.85□□□□□ -0.35
COL4A3-201ENST00000304990 CCL5P13501 91 aa12.85□□□□□ -0.35
COL4A3-201ENST00000304990 GRK4P32298 578 aa12.85□□□□□ -0.35
COL4A3-201ENST00000304990 PSMC4P43686 418 aa12.85□□□□□ -0.35
COL4A3-201ENST00000304990 GCKRQ14397 625 aa12.85□□□□□ -0.35
COL4A3-201ENST00000304990 C15orf52Q6ZUT6 534 aaKnown RBP12.85□□□□□ -0.35
COL4A3-201ENST00000304990 ERO1BQ86YB8 467 aa12.85□□□□□ -0.35
COL4A3-201ENST00000304990 CDAN1Q8IWY9 1227 aa12.85□□□□□ -0.35
COL4A3-201ENST00000304990 PLA2G12BQ9BX93 195 aa12.85□□□□□ -0.35
COL4A3-201ENST00000304990 ZCCHC17Q9NP64 241 aaKnown RBP12.85□□□□□ -0.35
COL4A3-201ENST00000304990 CPA4Q9UI42 421 aa12.85□□□□□ -0.35
COL4A3-201ENST00000304990 SERPINA10Q9UK55 444 aa12.85□□□□□ -0.35
COL4A3-201ENST00000304990 MYPNQ86TC9 1320 aa12.85□□□□□ -0.35
COL4A3-201ENST00000304990 EVI5O60447 810 aa12.84□□□□□ -0.35
COL4A3-201ENST00000304990 CSF1RP07333 972 aa12.84□□□□□ -0.35
COL4A3-201ENST00000304990 GJB1P08034 283 aa12.84□□□□□ -0.35
COL4A3-201ENST00000304990 CRKP46108 304 aa12.84□□□□□ -0.35
COL4A3-201ENST00000304990 GJA8P48165 433 aa12.84□□□□□ -0.35
COL4A3-201ENST00000304990 DZIP1LQ8IYY4 767 aaKnown RBP12.84□□□□□ -0.35
COL4A3-201ENST00000304990 HOOK2Q96ED9 719 aa12.84□□□□□ -0.35
COL4A3-201ENST00000304990 TEPSINQ96N21 525 aa12.84□□□□□ -0.35
COL4A3-201ENST00000304990 WRNIP1Q96S55 665 aa12.84□□□□□ -0.35
COL4A3-201ENST00000304990 CNNM1Q9NRU3 951 aa12.84□□□□□ -0.35
COL4A3-201ENST00000304990 TMOD2Q9NZR1 351 aa12.84□□□□□ -0.35
COL4A3-201ENST00000304990 SRRDQ9UH36 339 aa12.84□□□□□ -0.35
COL4A3-201ENST00000304990 RIPOR2Q9Y4F9 1068 aa12.84□□□□□ -0.35
COL4A3-201ENST00000304990 APAF1O14727 1248 aa12.83□□□□□ -0.36
COL4A3-201ENST00000304990 ZBTB7BO15156 539 aaPredicted RBP12.83□□□□□ -0.36
COL4A3-201ENST00000304990 FARP2O94887 1054 aaPredicted RBP12.83□□□□□ -0.36
COL4A3-201ENST00000304990 OSBPP22059 807 aa12.83□□□□□ -0.36
COL4A3-201ENST00000304990 ZKSCAN4Q969J2 545 aaPredicted RBP12.83□□□□□ -0.36
COL4A3-201ENST00000304990 IRS2Q9Y4H2 1338 aa12.83□□□□□ -0.36
COL4A3-201ENST00000304990 MGAMO43451 1857 aa12.82□□□□□ -0.36
COL4A3-201ENST00000304990 AK9Q5TCS8 1911 aa12.82□□□□□ -0.36
COL4A3-201ENST00000304990 BRCA2P51587 3418 aa12.82□□□□□ -0.36
COL4A3-201ENST00000304990 A0A1W2PPC1 479 aa12.82□□□□□ -0.36
COL4A3-201ENST00000304990 IRF6O14896 467 aa12.82□□□□□ -0.36
COL4A3-201ENST00000304990 FRAT2O75474 233 aaPredicted RBP12.82□□□□□ -0.36
COL4A3-201ENST00000304990 SLC4A2P04920 1241 aa12.82□□□□□ -0.36
COL4A3-201ENST00000304990 HIBADHP31937 336 aaKnown RBP12.82□□□□□ -0.36
COL4A3-201ENST00000304990 PPIL2Q13356 520 aa12.82□□□□□ -0.36
COL4A3-201ENST00000304990 FKBP5Q13451 457 aaPredicted RBP12.82□□□□□ -0.36
COL4A3-201ENST00000304990 CCDC57Q2TAC2 916 aa12.82□□□□□ -0.36
COL4A3-201ENST00000304990 LDHAL6AQ6ZMR3 332 aa12.82□□□□□ -0.36
COL4A3-201ENST00000304990 TSPYL6Q8N831 410 aa12.82□□□□□ -0.36
COL4A3-201ENST00000304990 SNCAIPQ9Y6H5 919 aa12.82□□□□□ -0.36
COL4A3-201ENST00000304990 FAM205AQ6ZU69 1335 aa12.82□□□□□ -0.36
COL4A3-201ENST00000304990 CEP290O15078 2479 aa12.81□□□□□ -0.36
COL4A3-201ENST00000304990 PDHXO00330 501 aa12.81□□□□□ -0.36
COL4A3-201ENST00000304990 MNX1P50219 401 aaPredicted RBP12.81□□□□□ -0.36
COL4A3-201ENST00000304990 CACNB3P54284 484 aa12.81□□□□□ -0.36
COL4A3-201ENST00000304990 FCGRTP55899 365 aa12.81□□□□□ -0.36
COL4A3-201ENST00000304990 DCAF15Q66K64 600 aa12.81□□□□□ -0.36
COL4A3-201ENST00000304990 C17orf99Q6UX52 265 aa12.81□□□□□ -0.36
COL4A3-201ENST00000304990 G2E3Q7L622 706 aa12.81□□□□□ -0.36
COL4A3-201ENST00000304990 VPS37DQ86XT2 251 aa12.81□□□□□ -0.36
COL4A3-201ENST00000304990 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.81□□□□□ -0.36
COL4A3-201ENST00000304990 U2AF1L4Q8WU68 220 aaKnown RBP12.81□□□□□ -0.36
COL4A3-201ENST00000304990 LRCH3Q96II8 777 aa12.81□□□□□ -0.36
COL4A3-201ENST00000304990 TFRCP02786 760 aaKnown RBP12.8□□□□□ -0.36
COL4A3-201ENST00000304990 GYG1P46976 350 aa12.8□□□□□ -0.36
COL4A3-201ENST00000304990 CHAF1AQ13111 956 aaPredicted RBP12.8□□□□□ -0.36
COL4A3-201ENST00000304990 TWISTNBQ3B726 338 aaPredicted RBP12.8□□□□□ -0.36
COL4A3-201ENST00000304990 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
COL4A3-201ENST00000304990 LINS1Q8NG48 757 aa12.8□□□□□ -0.36
COL4A3-201ENST00000304990 TDRD7Q8NHU6 1098 aaKnown RBP12.8□□□□□ -0.36
COL4A3-201ENST00000304990 DNAAF4Q8WXU2 420 aa12.8□□□□□ -0.36
COL4A3-201ENST00000304990 ZNF594Q96JF6 807 aaPredicted RBP12.8□□□□□ -0.36
COL4A3-201ENST00000304990 STAP2Q9UGK3 403 aa12.8□□□□□ -0.36
COL4A3-201ENST00000304990 SOX1O00570 391 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms