RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.93□□□□□ -1.3
TTC39C-201ENST00000304621 GNL3LQ9NVN8 582 aaKnown RBP6.93□□□□□ -1.3
TTC39C-201ENST00000304621 ABCF2Q9UG63 623 aa6.93□□□□□ -1.3
TTC39C-201ENST00000304621 RPAP1Q9BWH6 1393 aaPredicted RBP6.93□□□□□ -1.3
TTC39C-201ENST00000304621 MAST2Q6P0Q8 1798 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 PSDA5PKW4 1024 aaPredicted RBP6.92□□□□□ -1.3
TTC39C-201ENST00000304621 C6orf229H3BNL8 230 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 RIMBP2O15034 1052 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 PRKAB2O43741 272 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 MBD4O95243 580 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 PRKAR2AP13861 404 aaKnown RBP6.92□□□□□ -1.3
TTC39C-201ENST00000304621 PRDX5P30044 214 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 ALDH1B1P30837 517 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 BECN1Q14457 450 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 NOL8Q76FK4 1167 aaKnown RBP6.92□□□□□ -1.3
TTC39C-201ENST00000304621 HSCBQ8IWL3 235 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 LCORLQ8N3X6 602 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 MIGA1Q8NAN2 632 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 SLC16A10Q8TF71 515 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 JAKMIP1Q96N16 626 aaKnown RBP6.92□□□□□ -1.3
TTC39C-201ENST00000304621 STRBPQ96SI9 672 aaKnown RBP6.92□□□□□ -1.3
TTC39C-201ENST00000304621 LARP6Q9BRS8 491 aaKnown RBP6.92□□□□□ -1.3
TTC39C-201ENST00000304621 ARMT1Q9H993 441 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 EPB41L4AQ9HCS5 686 aaPredicted RBP6.92□□□□□ -1.3
TTC39C-201ENST00000304621 CD209Q9NNX6 404 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 LRP2BPQ9P2M1 347 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 CHD4Q14839 1912 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 PDS5AQ29RF7 1337 aaKnown RBP6.92□□□□□ -1.3
TTC39C-201ENST00000304621 LAMA4Q16363 1823 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 K7ELQ4 463 aaPredicted RBP6.92□□□□□ -1.3
TTC39C-201ENST00000304621 SEMA3EO15041 775 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 IL1R1P14778 569 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 DPEP1P16444 411 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 CASTP20810 708 aaKnown RBP6.92□□□□□ -1.3
TTC39C-201ENST00000304621 DYNLL1P63167 89 aaKnown RBP6.92□□□□□ -1.3
TTC39C-201ENST00000304621 MECOMQ03112 1051 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 MAP3K12Q12852 859 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 ZSCAN25Q6NSZ9 544 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 TMC4Q7Z404 712 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 MPNDQ8N594 471 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 NBPF3Q9H094 633 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 RAI14Q9P0K7 980 aa6.92□□□□□ -1.3
TTC39C-201ENST00000304621 ZNF646O15015 1829 aaPredicted RBP6.91□□□□□ -1.3
TTC39C-201ENST00000304621 SMIM22K7EJ46 135 aa6.91□□□□□ -1.3
TTC39C-201ENST00000304621 FRAT2O75474 233 aaPredicted RBP6.91□□□□□ -1.3
TTC39C-201ENST00000304621 FGAP02671 866 aa6.91□□□□□ -1.3
TTC39C-201ENST00000304621 CYP7A1P22680 504 aa6.91□□□□□ -1.3
TTC39C-201ENST00000304621 DOK7Q18PE1 504 aa6.91□□□□□ -1.3
TTC39C-201ENST00000304621 ZNF804AQ7Z570 1209 aa6.91□□□□□ -1.3
TTC39C-201ENST00000304621 NSUN4Q96CB9 384 aaKnown RBP6.91□□□□□ -1.3
TTC39C-201ENST00000304621 TCEANC2Q96MN5 208 aa6.91□□□□□ -1.3
TTC39C-201ENST00000304621 SGIP1Q9BQI5 828 aa6.91□□□□□ -1.3
TTC39C-201ENST00000304621 SLKQ9H2G2 1235 aaPredicted RBP6.91□□□□□ -1.3
TTC39C-201ENST00000304621 ZSWIM6Q9HCJ5 1215 aa6.91□□□□□ -1.3
TTC39C-201ENST00000304621 TACC3Q9Y6A5 838 aa6.91□□□□□ -1.3
TTC39C-201ENST00000304621 LARGE1O95461 756 aa6.9□□□□□ -1.3
TTC39C-201ENST00000304621 DDIT3P35638 169 aa6.9□□□□□ -1.3
TTC39C-201ENST00000304621 HAND2P61296 217 aa6.9□□□□□ -1.3
TTC39C-201ENST00000304621 LRRFIP1Q32MZ4 808 aaKnown RBP6.9□□□□□ -1.3
TTC39C-201ENST00000304621 TSGA10IPQ3SY00 556 aa6.9□□□□□ -1.3
TTC39C-201ENST00000304621 DPP8Q6V1X1 898 aaPredicted RBP6.9□□□□□ -1.3
TTC39C-201ENST00000304621 RUFY3Q7L099 469 aa6.9□□□□□ -1.3
TTC39C-201ENST00000304621 RIOK1Q9BRS2 568 aaKnown RBP6.9□□□□□ -1.3
TTC39C-201ENST00000304621 MXD3Q9BW11 206 aa6.9□□□□□ -1.3
TTC39C-201ENST00000304621 KCNQ5Q9NR82 932 aa6.9□□□□□ -1.3
TTC39C-201ENST00000304621 CREBZFQ9NS37 354 aa6.9□□□□□ -1.3
TTC39C-201ENST00000304621 GSG1L2A8MUP6 293 aa6.9□□□□□ -1.31
TTC39C-201ENST00000304621 C21orf2O43822 256 aa6.9□□□□□ -1.31
TTC39C-201ENST00000304621 DTNBO60941 627 aa6.9□□□□□ -1.31
TTC39C-201ENST00000304621 AK2P54819 239 aa6.9□□□□□ -1.31
TTC39C-201ENST00000304621 EVX2Q03828 476 aa6.9□□□□□ -1.31
TTC39C-201ENST00000304621 ERICH6Q7L0X2 663 aa6.9□□□□□ -1.31
TTC39C-201ENST00000304621 CNKSR1Q969H4 720 aa6.9□□□□□ -1.31
TTC39C-201ENST00000304621 TM6SF1Q9BZW5 370 aa6.9□□□□□ -1.31
TTC39C-201ENST00000304621 MTFR1LQ9H019 292 aa6.9□□□□□ -1.31
TTC39C-201ENST00000304621 ADAMTSL1Q8N6G6 1762 aa6.9□□□□□ -1.31
TTC39C-201ENST00000304621 SALL1Q9NSC2 1324 aa6.9□□□□□ -1.31
TTC39C-201ENST00000304621 COL4A5P29400 1685 aa6.9□□□□□ -1.31
TTC39C-201ENST00000304621 E7EWF7 191 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 ST18O60284 1047 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 PTGER2P43116 358 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 ST3GAL1Q11201 340 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 DIXDC1Q155Q3 683 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 NAA16Q6N069 864 aaPredicted RBP6.89□□□□□ -1.31
TTC39C-201ENST00000304621 TBC1D10CQ8IV04 446 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 ZGPATQ8N5A5 531 aaKnown RBP6.89□□□□□ -1.31
TTC39C-201ENST00000304621 CERS5Q8N5B7 392 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 AIDAQ96BJ3 306 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 TMX3Q96JJ7 454 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 INCENPQ9NQS7 918 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 MAGEB6P1A0A0J9YX57 407 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 ZKSCAN1P17029 563 aaPredicted RBP6.89□□□□□ -1.31
TTC39C-201ENST00000304621 RPS6KB1P23443 525 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 TOB2Q14106 344 aaPredicted RBP6.89□□□□□ -1.31
TTC39C-201ENST00000304621 RNF20Q5VTR2 975 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 WDR66Q8TBY9 1149 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 SDR42E1Q8WUS8 393 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 RTFDC1Q9BY42 306 aaPredicted RBP6.89□□□□□ -1.31
TTC39C-201ENST00000304621 DBNDD1Q9H9R9 158 aa6.89□□□□□ -1.31
TTC39C-201ENST00000304621 PDRG1Q9NUG6 133 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms