RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 CHAF1AQ13111 956 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC1-201ENST00000303731 DGKZQ13574 1117 aa20.78■□□□□ 0.92
TRAPPC1-201ENST00000303731 RASA3Q14644 834 aa20.78■□□□□ 0.92
TRAPPC1-201ENST00000303731 TEKT1Q969V4 418 aa20.78■□□□□ 0.92
TRAPPC1-201ENST00000303731 ZNF70Q9UC06 446 aaPredicted RBP20.78■□□□□ 0.92
TRAPPC1-201ENST00000303731 LAMB1P07942 1786 aa20.77■□□□□ 0.92
TRAPPC1-201ENST00000303731 GNAI3P08754 354 aa20.77■□□□□ 0.92
TRAPPC1-201ENST00000303731 INHBEP58166 350 aa20.77■□□□□ 0.92
TRAPPC1-201ENST00000303731 INTS3Q68E01 1043 aaKnown RBP20.77■□□□□ 0.92
TRAPPC1-201ENST00000303731 SLC10A4Q96EP9 437 aa20.77■□□□□ 0.92
TRAPPC1-201ENST00000303731 CEP126Q9P2H0 1117 aa20.77■□□□□ 0.92
TRAPPC1-201ENST00000303731 IQSEC3Q9UPP2 1182 aaPredicted RBP20.77■□□□□ 0.92
TRAPPC1-201ENST00000303731 IL15P40933 162 aaPredicted RBP20.76■□□□□ 0.91
TRAPPC1-201ENST00000303731 NOM1Q5C9Z4 860 aaKnown RBP20.76■□□□□ 0.91
TRAPPC1-201ENST00000303731 SPRYD7Q5W111 196 aa20.76■□□□□ 0.91
TRAPPC1-201ENST00000303731 ATG9AQ7Z3C6 839 aa20.76■□□□□ 0.91
TRAPPC1-201ENST00000303731 WDR66Q8TBY9 1149 aa20.76■□□□□ 0.91
TRAPPC1-201ENST00000303731 TDRD3Q9H7E2 651 aaKnown RBP20.76■□□□□ 0.91
TRAPPC1-201ENST00000303731 LRRFIP2Q9Y608 721 aaKnown RBP20.76■□□□□ 0.91
TRAPPC1-201ENST00000303731 MANSC4A6NHS7 340 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC1-201ENST00000303731 ALDH1A1P00352 501 aa20.75■□□□□ 0.91
TRAPPC1-201ENST00000303731 NBPF12Q5TAG4 269 aaPredicted RBP20.75■□□□□ 0.91
TRAPPC1-201ENST00000303731 ANKRD13AQ8IZ07 590 aa20.75■□□□□ 0.91
TRAPPC1-201ENST00000303731 CFHR5Q9BXR6 569 aa20.75■□□□□ 0.91
TRAPPC1-201ENST00000303731 GNL3LQ9NVN8 582 aaKnown RBP20.75■□□□□ 0.91
TRAPPC1-201ENST00000303731 CCDC85CA6NKD9 419 aa20.74■□□□□ 0.91
TRAPPC1-201ENST00000303731 ATP2B3Q16720 1220 aa20.74■□□□□ 0.91
TRAPPC1-201ENST00000303731 ZDHHC15Q96MV8 337 aa20.74■□□□□ 0.91
TRAPPC1-201ENST00000303731 SIL1Q9H173 461 aa20.74■□□□□ 0.91
TRAPPC1-201ENST00000303731 COPRSQ9NQ92 184 aa20.74■□□□□ 0.91
TRAPPC1-201ENST00000303731 TMOD2Q9NZR1 351 aa20.74■□□□□ 0.91
TRAPPC1-201ENST00000303731 AOX1Q06278 1338 aa20.74■□□□□ 0.91
TRAPPC1-201ENST00000303731 ZBTB22O15209 634 aa20.73■□□□□ 0.91
TRAPPC1-201ENST00000303731 FKBP1CQ5VVH2 108 aa20.73■□□□□ 0.91
TRAPPC1-201ENST00000303731 HHIPL2Q6UWX4 724 aa20.73■□□□□ 0.91
TRAPPC1-201ENST00000303731 CTU1Q7Z7A3 348 aaKnown RBP20.73■□□□□ 0.91
TRAPPC1-201ENST00000303731 MEIS3Q99687 375 aa20.73■□□□□ 0.91
TRAPPC1-201ENST00000303731 SEMA3EO15041 775 aa20.72■□□□□ 0.91
TRAPPC1-201ENST00000303731 USP2O75604 605 aaPredicted RBP20.72■□□□□ 0.91
TRAPPC1-201ENST00000303731 MKRN3Q13064 507 aaKnown RBP20.72■□□□□ 0.91
TRAPPC1-201ENST00000303731 ATF7IPQ6VMQ6 1270 aa20.72■□□□□ 0.91
TRAPPC1-201ENST00000303731 HOOK2Q96ED9 719 aa20.72■□□□□ 0.91
TRAPPC1-201ENST00000303731 WNK4Q96J92 1243 aa20.72■□□□□ 0.91
TRAPPC1-201ENST00000303731 TCP10L2B9ZVM9 353 aa20.71■□□□□ 0.91
TRAPPC1-201ENST00000303731 MTX1Q13505 466 aa20.71■□□□□ 0.91
TRAPPC1-201ENST00000303731 GRIK5Q16478 980 aa20.71■□□□□ 0.91
TRAPPC1-201ENST00000303731 FAM83AQ86UY5 434 aa20.71■□□□□ 0.91
TRAPPC1-201ENST00000303731 TEPSINQ96N21 525 aa20.71■□□□□ 0.91
TRAPPC1-201ENST00000303731 FZD1Q9UP38 647 aa20.71■□□□□ 0.91
TRAPPC1-201ENST00000303731 OTOFQ9HC10 1997 aa20.7■□□□□ 0.9
TRAPPC1-201ENST00000303731 PKN2Q16513 984 aaKnown RBP20.7■□□□□ 0.9
TRAPPC1-201ENST00000303731 CLMNQ96JQ2 1002 aa20.7■□□□□ 0.9
TRAPPC1-201ENST00000303731 DENND2AQ9ULE3 1009 aa20.7■□□□□ 0.9
TRAPPC1-201ENST00000303731 TBC1D8O95759 1140 aa20.69■□□□□ 0.9
TRAPPC1-201ENST00000303731 TRIM27P14373 513 aa20.69■□□□□ 0.9
TRAPPC1-201ENST00000303731 OTUD7BQ6GQQ9 843 aa20.69■□□□□ 0.9
TRAPPC1-201ENST00000303731 TMEM39BQ9GZU3 492 aa20.69■□□□□ 0.9
TRAPPC1-201ENST00000303731 AKAP2Q9Y2D5 859 aa20.69■□□□□ 0.9
TRAPPC1-201ENST00000303731 SALL1Q9NSC2 1324 aa20.69■□□□□ 0.9
TRAPPC1-201ENST00000303731 RPAP1Q9BWH6 1393 aaPredicted RBP20.69■□□□□ 0.9
TRAPPC1-201ENST00000303731 GPR25O00155 361 aa20.68■□□□□ 0.9
TRAPPC1-201ENST00000303731 SRGAP3O43295 1099 aa20.68■□□□□ 0.9
TRAPPC1-201ENST00000303731 DIEXFQ68CQ4 756 aaKnown RBP20.68■□□□□ 0.9
TRAPPC1-201ENST00000303731 APOBEC3HQ6NTF7 200 aaKnown RBP20.68■□□□□ 0.9
TRAPPC1-201ENST00000303731 IFNL1Q8IU54 200 aa20.68■□□□□ 0.9
TRAPPC1-201ENST00000303731 ZGPATQ8N5A5 531 aaKnown RBP20.68■□□□□ 0.9
TRAPPC1-201ENST00000303731 ZNF296Q8WUU4 475 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC1-201ENST00000303731 FRAT1Q92837 279 aaPredicted RBP20.68■□□□□ 0.9
TRAPPC1-201ENST00000303731 PA2G4Q9UQ80 394 aaKnown RBP20.68■□□□□ 0.9
TRAPPC1-201ENST00000303731 GNAI2P04899 355 aa20.67■□□□□ 0.9
TRAPPC1-201ENST00000303731 RGS19P49795 217 aa20.67■□□□□ 0.9
TRAPPC1-201ENST00000303731 BCAR3O75815 825 aa20.66■□□□□ 0.9
TRAPPC1-201ENST00000303731 LDHBP07195 334 aaKnown RBP20.66■□□□□ 0.9
TRAPPC1-201ENST00000303731 HNRNPUQ00839 825 aaKnown RBP eCLIP20.66■□□□□ 0.9
TRAPPC1-201ENST00000303731 CSADQ9Y600 493 aa20.66■□□□□ 0.9
TRAPPC1-201ENST00000303731 PDS5AQ29RF7 1337 aaKnown RBP20.66■□□□□ 0.9
TRAPPC1-201ENST00000303731 FKTNO75072 461 aa20.65■□□□□ 0.9
TRAPPC1-201ENST00000303731 MAP3K9P80192 1104 aa20.65■□□□□ 0.9
TRAPPC1-201ENST00000303731 ZKSCAN2Q63HK3 967 aa20.65■□□□□ 0.9
TRAPPC1-201ENST00000303731 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.65■□□□□ 0.96e-7■■■■□ 23.4
TRAPPC1-201ENST00000303731 TESPA1A2RU30 521 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC1-201ENST00000303731 MVPQ14764 893 aaKnown RBP20.64■□□□□ 0.89
TRAPPC1-201ENST00000303731 DCAF15Q66K64 600 aa20.64■□□□□ 0.89
TRAPPC1-201ENST00000303731 CCDC102BQ68D86 513 aa20.64■□□□□ 0.89
TRAPPC1-201ENST00000303731 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC1-201ENST00000303731 MIER1Q8N108 512 aa20.64■□□□□ 0.89
TRAPPC1-201ENST00000303731 OPTNQ96CV9 577 aa20.64■□□□□ 0.89
TRAPPC1-201ENST00000303731 ELP3Q9H9T3 547 aa20.64■□□□□ 0.89
TRAPPC1-201ENST00000303731 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.64■□□□□ 0.89
TRAPPC1-201ENST00000303731 PRDX5P30044 214 aa20.63■□□□□ 0.89
TRAPPC1-201ENST00000303731 PHKA1P46020 1223 aa20.63■□□□□ 0.89
TRAPPC1-201ENST00000303731 CACNB3P54284 484 aa20.63■□□□□ 0.89
TRAPPC1-201ENST00000303731 VGLL4Q14135 290 aa20.63■□□□□ 0.89
TRAPPC1-201ENST00000303731 CDAN1Q8IWY9 1227 aa20.63■□□□□ 0.89
TRAPPC1-201ENST00000303731 DAGLAQ9Y4D2 1042 aa20.63■□□□□ 0.89
TRAPPC1-201ENST00000303731 A0A1B0GUL7 405 aa20.62■□□□□ 0.89
TRAPPC1-201ENST00000303731 IGF2BP3O00425 579 aaKnown RBP eCLIP20.62■□□□□ 0.89
TRAPPC1-201ENST00000303731 GJA5P36382 358 aa20.62■□□□□ 0.89
TRAPPC1-201ENST00000303731 GTF2A2P52657 109 aa20.62■□□□□ 0.89
TRAPPC1-201ENST00000303731 MLLT1Q03111 559 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms