RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 CDKL5O76039 1030 aa16.22■□□□□ 0.19
SDC2-201ENST00000302190 CCDC66A2RUB6 948 aa16.21■□□□□ 0.19
SDC2-201ENST00000302190 STARD3NLO95772 234 aa16.21■□□□□ 0.19
SDC2-201ENST00000302190 ZAP70P43403 619 aa16.21■□□□□ 0.19
SDC2-201ENST00000302190 GNG11P61952 73 aa16.21■□□□□ 0.19
SDC2-201ENST00000302190 PPFIBP1Q86W92 1011 aa16.21■□□□□ 0.19
SDC2-201ENST00000302190 ADD1P35611 737 aaKnown RBP16.21■□□□□ 0.19
SDC2-201ENST00000302190 FAM160A1Q05DH4 1040 aa16.21■□□□□ 0.19
SDC2-201ENST00000302190 JAG2Q9Y219 1238 aa16.21■□□□□ 0.19
SDC2-201ENST00000302190 PHLPP1O60346 1717 aa16.21■□□□□ 0.18
SDC2-201ENST00000302190 EXOC5O00471 708 aa16.21■□□□□ 0.18
SDC2-201ENST00000302190 ATP5JP18859 108 aa16.21■□□□□ 0.18
SDC2-201ENST00000302190 COL9A3Q14050 684 aaPredicted RBP16.21■□□□□ 0.18
SDC2-201ENST00000302190 KDM6AO15550 1401 aaPredicted RBP16.2■□□□□ 0.18
SDC2-201ENST00000302190 EYA2O00167 538 aa16.2■□□□□ 0.18
SDC2-201ENST00000302190 BABAM1Q9NWV8 329 aa16.2■□□□□ 0.18
SDC2-201ENST00000302190 ANKRD18BA2A2Z9 1011 aa16.2■□□□□ 0.18
SDC2-201ENST00000302190 ZBTB43O43298 467 aa16.2■□□□□ 0.18
SDC2-201ENST00000302190 KCNQ2O43526 872 aa16.2■□□□□ 0.18
SDC2-201ENST00000302190 XBP1P17861 261 aa16.2■□□□□ 0.18
SDC2-201ENST00000302190 GOLGA8FQ08AF8 430 aa16.2■□□□□ 0.18
SDC2-201ENST00000302190 GOLGA8DPQ0D2H9 430 aa16.2■□□□□ 0.18
SDC2-201ENST00000302190 KIAA1524Q8TCG1 905 aa16.2■□□□□ 0.18
SDC2-201ENST00000302190 UTP14AQ9BVJ6 771 aaKnown RBP16.2■□□□□ 0.18
SDC2-201ENST00000302190 ADORA1P30542 326 aa16.2■□□□□ 0.18
SDC2-201ENST00000302190 ELF2Q15723 593 aa16.2■□□□□ 0.18
SDC2-201ENST00000302190 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
SDC2-201ENST00000302190 ANKRD20A12PQ8NF67 263 aa16.2■□□□□ 0.18
SDC2-201ENST00000302190 HSPD1P10809 573 aaKnown RBP16.19■□□□□ 0.18
SDC2-201ENST00000302190 XAGE2Q96GT9 111 aa16.19■□□□□ 0.18
SDC2-201ENST00000302190 TOB2Q14106 344 aaPredicted RBP16.19■□□□□ 0.18
SDC2-201ENST00000302190 DCAF5Q96JK2 942 aa16.19■□□□□ 0.18
SDC2-201ENST00000302190 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.19■□□□□ 0.18
SDC2-201ENST00000302190 GPAA1O43292 621 aa16.18■□□□□ 0.18
SDC2-201ENST00000302190 PTPN12Q05209 780 aaKnown RBP16.18■□□□□ 0.18
SDC2-201ENST00000302190 KARSQ15046 597 aaKnown RBP16.18■□□□□ 0.18
SDC2-201ENST00000302190 CCDC102BQ68D86 513 aa16.18■□□□□ 0.18
SDC2-201ENST00000302190 GOLGA6L1Q8N7Z2 621 aa16.18■□□□□ 0.18
SDC2-201ENST00000302190 AIFM3Q96NN9 605 aa16.18■□□□□ 0.18
SDC2-201ENST00000302190 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.18■□□□□ 0.18
SDC2-201ENST00000302190 USP21Q9UK80 565 aa16.18■□□□□ 0.18
SDC2-201ENST00000302190 COL18A1P39060 1754 aa16.18■□□□□ 0.18
SDC2-201ENST00000302190 IPO7O95373 1038 aaKnown RBP16.18■□□□□ 0.18
SDC2-201ENST00000302190 KCNG4Q8TDN1 519 aa16.18■□□□□ 0.18
SDC2-201ENST00000302190 PGBD1Q96JS3 809 aa16.18■□□□□ 0.18
SDC2-201ENST00000302190 RPAP1Q9BWH6 1393 aaPredicted RBP16.18■□□□□ 0.18
SDC2-201ENST00000302190 NAP1L1P55209 391 aaKnown RBP16.18■□□□□ 0.18
SDC2-201ENST00000302190 SSRP1Q08945 709 aaKnown RBP16.18■□□□□ 0.18
SDC2-201ENST00000302190 TMCO3Q6UWJ1 677 aa16.18■□□□□ 0.18
SDC2-201ENST00000302190 XPO4Q9C0E2 1151 aaKnown RBP16.18■□□□□ 0.18
SDC2-201ENST00000302190 PAXBP1Q9Y5B6 917 aa16.18■□□□□ 0.18
SDC2-201ENST00000302190 DDB1Q16531 1140 aa16.17■□□□□ 0.18
SDC2-201ENST00000302190 STAMQ92783 540 aa16.17■□□□□ 0.18
SDC2-201ENST00000302190 ZNF215Q9UL58 517 aaPredicted RBP16.17■□□□□ 0.18
SDC2-201ENST00000302190 CLIC4Q9Y696 253 aa16.17■□□□□ 0.18
SDC2-201ENST00000302190 MAP3K12Q12852 859 aa16.17■□□□□ 0.18
SDC2-201ENST00000302190 CEMIPQ8WUJ3 1361 aa16.17■□□□□ 0.18
SDC2-201ENST00000302190 A0A0G2JLW4 131 aa16.17■□□□□ 0.18
SDC2-201ENST00000302190 GTF2F1P35269 517 aaKnown RBP eCLIP16.17■□□□□ 0.18
SDC2-201ENST00000302190 NDUFA8P51970 172 aa16.17■□□□□ 0.18
SDC2-201ENST00000302190 PLBD2Q8NHP8 589 aa16.17■□□□□ 0.18
SDC2-201ENST00000302190 BRMS1Q9HCU9 246 aa16.17■□□□□ 0.18
SDC2-201ENST00000302190 ADCY9O60503 1353 aa16.17■□□□□ 0.18
SDC2-201ENST00000302190 CBFA2T2O43439 604 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 PRDM1O75626 825 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 ZNF202O95125 648 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 GSDMDP57764 484 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 ZNF827Q17R98 1081 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 FILIP1LQ4L180 1135 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 PCDHA7Q9UN72 937 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 NHSL1Q5SYE7 1610 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 SNAP23O00161 211 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 TRMT44Q8IYL2 757 aaKnown RBP16.16■□□□□ 0.18
SDC2-201ENST00000302190 PIGBQ92521 554 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 ARHGAP29Q52LW3 1261 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 KCNJ14Q9UNX9 436 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 PCDH11XQ9BZA7 1347 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 PCDH11YQ9BZA8 1340 aa16.16■□□□□ 0.18
SDC2-201ENST00000302190 FGAP02671 866 aa16.15■□□□□ 0.18
SDC2-201ENST00000302190 MFSD6Q6ZSS7 791 aa16.15■□□□□ 0.18
SDC2-201ENST00000302190 MAGEB6Q8N7X4 407 aa16.15■□□□□ 0.18
SDC2-201ENST00000302190 CLIC6Q96NY7 704 aa16.15■□□□□ 0.18
SDC2-201ENST00000302190 FAM193AP78312 1265 aa16.15■□□□□ 0.18
SDC2-201ENST00000302190 DHX58Q96C10 678 aa16.15■□□□□ 0.18
SDC2-201ENST00000302190 LZTFL1Q9NQ48 299 aa16.15■□□□□ 0.18
SDC2-201ENST00000302190 KIF4BQ2VIQ3 1234 aa16.15■□□□□ 0.18
SDC2-201ENST00000302190 DPCR1Q3MIW9 517 aa16.15■□□□□ 0.18
SDC2-201ENST00000302190 GPIHBP1Q8IV16 184 aa16.15■□□□□ 0.18
SDC2-201ENST00000302190 DNAJC10Q8IXB1 793 aa16.15■□□□□ 0.18
SDC2-201ENST00000302190 SYNE4Q8N205 404 aa16.15■□□□□ 0.18
SDC2-201ENST00000302190 NSUN7Q8NE18 718 aaKnown RBP16.15■□□□□ 0.18
SDC2-201ENST00000302190 CLSTN1O94985 981 aa16.14■□□□□ 0.18
SDC2-201ENST00000302190 PDIA3P30101 505 aaKnown RBP16.14■□□□□ 0.18
SDC2-201ENST00000302190 CTDSPL2Q05D32 466 aa16.14■□□□□ 0.18
SDC2-201ENST00000302190 SLU7O95391 586 aaKnown RBP16.14■□□□□ 0.17
SDC2-201ENST00000302190 CAGE1Q8TC20 777 aa16.14■□□□□ 0.17
SDC2-201ENST00000302190 NEMFO60524 1076 aa16.14■□□□□ 0.17
SDC2-201ENST00000302190 DNA2P51530 1060 aa16.14■□□□□ 0.17
SDC2-201ENST00000302190 ANO1Q5XXA6 986 aa16.14■□□□□ 0.17
SDC2-201ENST00000302190 CCDC12Q8WUD4 166 aaPredicted RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms