RNA–Protein interactions for RNA: ENST00000301821.10

RPSA-201, Transcript of ribosomal protein SA, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPSA, Length 1,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-201ENST00000301821 WWC1Q8IX03 1113 aa13.01□□□□□ -0.33
RPSA-201ENST00000301821 FAM43AQ8N2R8 423 aa13.01□□□□□ -0.33
RPSA-201ENST00000301821 SH3TC2Q8TF17 1288 aa13.01□□□□□ -0.33
RPSA-201ENST00000301821 OTUD5Q96G74 571 aa13.01□□□□□ -0.33
RPSA-201ENST00000301821 TDRD3Q9H7E2 651 aaKnown RBP13.01□□□□□ -0.33
RPSA-201ENST00000301821 ZNF70Q9UC06 446 aaPredicted RBP13.01□□□□□ -0.33
RPSA-201ENST00000301821 ARAP2Q8WZ64 1704 aa13.01□□□□□ -0.33
RPSA-201ENST00000301821 TCP10L2B9ZVM9 353 aa13□□□□□ -0.33
RPSA-201ENST00000301821 PLIN1O60240 522 aa13□□□□□ -0.33
RPSA-201ENST00000301821 ECM2O94769 699 aaPredicted RBP13□□□□□ -0.33
RPSA-201ENST00000301821 GTF2A2P52657 109 aa13□□□□□ -0.33
RPSA-201ENST00000301821 IFIT5Q13325 482 aaKnown RBP13□□□□□ -0.33
RPSA-201ENST00000301821 FKBP5Q13451 457 aaPredicted RBP13□□□□□ -0.33
RPSA-201ENST00000301821 VGLL4Q14135 290 aa13□□□□□ -0.33
RPSA-201ENST00000301821 TWISTNBQ3B726 338 aaPredicted RBP13□□□□□ -0.33
RPSA-201ENST00000301821 SPDYE2Q495Y8 402 aa13□□□□□ -0.33
RPSA-201ENST00000301821 PPP1R3FQ6ZSY5 799 aaPredicted RBP13□□□□□ -0.33
RPSA-201ENST00000301821 ARHGAP39Q9C0H5 1083 aa13□□□□□ -0.33
RPSA-201ENST00000301821 TTF2Q9UNY4 1162 aaKnown RBP13□□□□□ -0.33
RPSA-201ENST00000301821 CSADQ9Y600 493 aa13□□□□□ -0.33
RPSA-201ENST00000301821 ANP32CO43423 234 aa12.99□□□□□ -0.33
RPSA-201ENST00000301821 FLIIQ13045 1269 aa12.99□□□□□ -0.33
RPSA-201ENST00000301821 MFSD14BQ5SR56 506 aa12.99□□□□□ -0.33
RPSA-201ENST00000301821 CHRDL2Q6WN34 429 aa12.99□□□□□ -0.33
RPSA-201ENST00000301821 DNAAF4Q8WXU2 420 aa12.99□□□□□ -0.33
RPSA-201ENST00000301821 TEPSINQ96N21 525 aa12.99□□□□□ -0.33
RPSA-201ENST00000301821 TMEM39BQ9GZU3 492 aa12.99□□□□□ -0.33
RPSA-201ENST00000301821 MAP3K9P80192 1104 aa12.98□□□□□ -0.33
RPSA-201ENST00000301821 KIF22Q14807 665 aa12.98□□□□□ -0.33
RPSA-201ENST00000301821 TAF7LQ5H9L4 462 aa12.98□□□□□ -0.33
RPSA-201ENST00000301821 LINS1Q8NG48 757 aa12.98□□□□□ -0.33
RPSA-201ENST00000301821 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.98□□□□□ -0.33
RPSA-201ENST00000301821 ZNF594Q96JF6 807 aaPredicted RBP12.98□□□□□ -0.33
RPSA-201ENST00000301821 HTTP42858 3142 aa12.98□□□□□ -0.33
RPSA-201ENST00000301821 FAM205AQ6ZU69 1335 aa12.97□□□□□ -0.33
RPSA-201ENST00000301821 WDHD1O75717 1129 aaPredicted RBP12.97□□□□□ -0.33
RPSA-201ENST00000301821 TNNI2P48788 182 aa12.97□□□□□ -0.33
RPSA-201ENST00000301821 FOXO4P98177 505 aa12.97□□□□□ -0.33
RPSA-201ENST00000301821 CCDC27Q2M243 656 aa12.97□□□□□ -0.33
RPSA-201ENST00000301821 DZIP1LQ8IYY4 767 aaKnown RBP12.97□□□□□ -0.33
RPSA-201ENST00000301821 CNNM1Q9NRU3 951 aa12.97□□□□□ -0.33
RPSA-201ENST00000301821 SERPINA10Q9UK55 444 aa12.97□□□□□ -0.33
RPSA-201ENST00000301821 SPDYE5A6NIY4 337 aa12.96□□□□□ -0.33
RPSA-201ENST00000301821 TLR2O60603 784 aa12.96□□□□□ -0.33
RPSA-201ENST00000301821 CRKP46108 304 aa12.96□□□□□ -0.33
RPSA-201ENST00000301821 GYG1P46976 350 aa12.96□□□□□ -0.33
RPSA-201ENST00000301821 LACTBP83111 547 aaPredicted RBP12.96□□□□□ -0.33
RPSA-201ENST00000301821 LDHAL6AQ6ZMR3 332 aa12.96□□□□□ -0.33
RPSA-201ENST00000301821 DPF3Q92784 378 aa12.96□□□□□ -0.33
RPSA-201ENST00000301821 FANCIQ9NVI1 1328 aa12.95□□□□□ -0.34
RPSA-201ENST00000301821 BTBD19C9JJ37 291 aa12.95□□□□□ -0.34
RPSA-201ENST00000301821 CETPP11597 493 aa12.95□□□□□ -0.34
RPSA-201ENST00000301821 CACNB3P54284 484 aa12.95□□□□□ -0.34
RPSA-201ENST00000301821 MTFR1Q15390 333 aa12.95□□□□□ -0.34
RPSA-201ENST00000301821 CCDC57Q2TAC2 916 aa12.95□□□□□ -0.34
RPSA-201ENST00000301821 LMBR1LQ6UX01 489 aa12.95□□□□□ -0.34
RPSA-201ENST00000301821 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
RPSA-201ENST00000301821 SHISA4Q96DD7 197 aa12.95□□□□□ -0.34
RPSA-201ENST00000301821 WRNIP1Q96S55 665 aa12.95□□□□□ -0.34
RPSA-201ENST00000301821 RBM27Q9P2N5 1060 aaKnown RBP12.95□□□□□ -0.34
RPSA-201ENST00000301821 SNCAIPQ9Y6H5 919 aa12.95□□□□□ -0.34
RPSA-201ENST00000301821 F6X3S4 739 aa12.94□□□□□ -0.34
RPSA-201ENST00000301821 HIBADHP31937 336 aaKnown RBP12.94□□□□□ -0.34
RPSA-201ENST00000301821 EPHA10Q5JZY3 1008 aa12.94□□□□□ -0.34
RPSA-201ENST00000301821 FAM9BQ8IZU0 186 aa12.94□□□□□ -0.34
RPSA-201ENST00000301821 IQSEC3Q9UPP2 1182 aaPredicted RBP12.94□□□□□ -0.34
RPSA-201ENST00000301821 IL16Q14005 1332 aa12.93□□□□□ -0.34
RPSA-201ENST00000301821 IRF6O14896 467 aa12.93□□□□□ -0.34
RPSA-201ENST00000301821 GNRH1P01148 92 aa12.93□□□□□ -0.34
RPSA-201ENST00000301821 PRMT2P55345 433 aa12.93□□□□□ -0.34
RPSA-201ENST00000301821 CHAF1AQ13111 956 aaPredicted RBP12.93□□□□□ -0.34
RPSA-201ENST00000301821 SNAPC2Q13487 334 aa12.93□□□□□ -0.34
RPSA-201ENST00000301821 GRIK5Q16478 980 aa12.93□□□□□ -0.34
RPSA-201ENST00000301821 ERO1BQ86YB8 467 aa12.93□□□□□ -0.34
RPSA-201ENST00000301821 ZKSCAN4Q969J2 545 aaPredicted RBP12.93□□□□□ -0.34
RPSA-201ENST00000301821 CPA4Q9UI42 421 aa12.93□□□□□ -0.34
RPSA-201ENST00000301821 CTGFP29279 349 aa12.92□□□□□ -0.34
RPSA-201ENST00000301821 EXOSC9Q06265 439 aaKnown RBP12.92□□□□□ -0.34
RPSA-201ENST00000301821 UBE4AQ14139 1066 aa12.92□□□□□ -0.34
RPSA-201ENST00000301821 RAET1EQ8TD07 263 aa12.92□□□□□ -0.34
RPSA-201ENST00000301821 FAM84BQ96KN1 310 aaPredicted RBP12.92□□□□□ -0.34
RPSA-201ENST00000301821 ZCCHC17Q9NP64 241 aaKnown RBP12.92□□□□□ -0.34
RPSA-201ENST00000301821 TMOD2Q9NZR1 351 aa12.92□□□□□ -0.34
RPSA-201ENST00000301821 MKI67P46013 3256 aaKnown RBP12.92□□□□□ -0.34
RPSA-201ENST00000301821 OSBPP22059 807 aa12.91□□□□□ -0.34
RPSA-201ENST00000301821 PSMC4P43686 418 aa12.91□□□□□ -0.34
RPSA-201ENST00000301821 PPIL2Q13356 520 aa12.91□□□□□ -0.34
RPSA-201ENST00000301821 BEND3Q5T5X7 828 aa12.91□□□□□ -0.34
RPSA-201ENST00000301821 VPS37DQ86XT2 251 aa12.91□□□□□ -0.34
RPSA-201ENST00000301821 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.91□□□□□ -0.34
RPSA-201ENST00000301821 NKX2-3Q8TAU0 364 aa12.91□□□□□ -0.34
RPSA-201ENST00000301821 TEKT1Q969V4 418 aa12.91□□□□□ -0.34
RPSA-201ENST00000301821 PUS3Q9BZE2 481 aaKnown RBP12.91□□□□□ -0.34
RPSA-201ENST00000301821 SRRDQ9UH36 339 aa12.91□□□□□ -0.34
RPSA-201ENST00000301821 TRIOBPQ9H2D6 2365 aa12.91□□□□□ -0.34
RPSA-201ENST00000301821 MYPNQ86TC9 1320 aa12.9□□□□□ -0.34
RPSA-201ENST00000301821 GRM8O00222 908 aa12.9□□□□□ -0.34
RPSA-201ENST00000301821 VAMP4O75379 141 aa12.9□□□□□ -0.34
RPSA-201ENST00000301821 FRAT2O75474 233 aaPredicted RBP12.9□□□□□ -0.34
RPSA-201ENST00000301821 FMNL1O95466 1100 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms