RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 NEDD9Q14511 834 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 BSPRYQ5W0U4 402 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 GSDMBQ8TAX9 411 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 CPSF2Q9P2I0 782 aaKnown RBP13.9□□□□□ -0.18
ABCA3-201ENST00000301732 IGF1RP08069 1367 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 ATP11AP98196 1134 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 MCMDC2Q4G0Z9 681 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 IGSF22Q8N9C0 903 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 SMARCC2Q8TAQ2 1214 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 EEF2KMTQ96G04 330 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 TRIM6Q9C030 488 aaPredicted RBP13.9□□□□□ -0.18
ABCA3-201ENST00000301732 PRG4Q92954 1404 aaPredicted RBP13.9□□□□□ -0.18
ABCA3-201ENST00000301732 GOLGA6CA6NDK9 693 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 GOLGA6DP0CG33 693 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 PDE6BP35913 854 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 ZYXQ15942 572 aaKnown RBP13.9□□□□□ -0.18
ABCA3-201ENST00000301732 CREB3L3Q68CJ9 461 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 GOLGA6AQ9NYA3 693 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 TPX2Q9ULW0 747 aaKnown RBP13.9□□□□□ -0.18
ABCA3-201ENST00000301732 CCDC61Q9Y6R9 512 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 SREK1Q8WXA9 508 aaKnown RBP13.9□□□□□ -0.18
ABCA3-201ENST00000301732 TBC1D31Q96DN5 1066 aa13.9□□□□□ -0.18
ABCA3-201ENST00000301732 LUC7L2Q9Y383 392 aaKnown RBP13.9□□□□□ -0.18
ABCA3-201ENST00000301732 CCDC24Q8N4L8 307 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 BLZF1Q9H2G9 400 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 CEBPAP49715 358 aaPredicted RBP13.89□□□□□ -0.19
ABCA3-201ENST00000301732 KRT83P78385 493 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.89□□□□□ -0.19
ABCA3-201ENST00000301732 C9orf84Q5VXU9 1444 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 NBPF7P0C2Y1 421 aaPredicted RBP13.89□□□□□ -0.19
ABCA3-201ENST00000301732 ADKP55263 362 aaKnown RBP13.89□□□□□ -0.19
ABCA3-201ENST00000301732 ADCY1Q08828 1119 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 TFCP2Q12800 502 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 STXBP4Q6ZWJ1 553 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 FERMT1Q9BQL6 677 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 AKR1B15C9JRZ8 316 aaPredicted RBP13.89□□□□□ -0.19
ABCA3-201ENST00000301732 TRAF5O00463 557 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 SPOPO43791 374 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 RPSAP08865 295 aaKnown RBP13.89□□□□□ -0.19
ABCA3-201ENST00000301732 SARNPP82979 210 aaKnown RBP13.89□□□□□ -0.19
ABCA3-201ENST00000301732 NOC4LQ9BVI4 516 aaKnown RBP13.89□□□□□ -0.19
ABCA3-201ENST00000301732 TRIM75PA6NK02 468 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 MAN1A1P33908 653 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 DYMQ7RTS9 669 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.89□□□□□ -0.19
ABCA3-201ENST00000301732 GPCPD1Q9NPB8 672 aa13.89□□□□□ -0.19
ABCA3-201ENST00000301732 ADGRF5Q8IZF2 1346 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 CRCPO75575 148 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 LRMPQ12912 555 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 CMTR1Q8N1G2 835 aaKnown RBP13.88□□□□□ -0.19
ABCA3-201ENST00000301732 CRNKL1Q9BZJ0 848 aaKnown RBP13.88□□□□□ -0.19
ABCA3-201ENST00000301732 EHMT1Q9H9B1 1298 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 ATAD2Q6PL18 1390 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 MTX1Q13505 466 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 FBXO31Q5XUX0 539 aaPredicted RBP13.88□□□□□ -0.19
ABCA3-201ENST00000301732 MAK16Q9BXY0 300 aaKnown RBP13.88□□□□□ -0.19
ABCA3-201ENST00000301732 KRT2P35908 639 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 DESI2Q9BSY9 194 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 GOLGA8FQ08AF8 430 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 GOLGA8DPQ0D2H9 430 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 SLF1Q9BQI6 1058 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 MCM9Q9NXL9 1143 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 TAB2Q9NYJ8 693 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 MYO1AQ9UBC5 1043 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 ARAP1Q96P48 1450 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 POLR2DO15514 142 aaKnown RBP13.88□□□□□ -0.19
ABCA3-201ENST00000301732 C8orf74Q6P047 294 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 ANKRD13DQ6ZTN6 518 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 SDCCAG8Q86SQ7 713 aaPredicted RBP13.88□□□□□ -0.19
ABCA3-201ENST00000301732 DDX27Q96GQ7 796 aaKnown RBP13.88□□□□□ -0.19
ABCA3-201ENST00000301732 PAG1Q9NWQ8 432 aa13.88□□□□□ -0.19
ABCA3-201ENST00000301732 PRDM1O75626 825 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 CIB2O75838 187 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 SATB1Q01826 763 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 RDH13Q8NBN7 331 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 TRIM35Q9UPQ4 493 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 CUX1P39880 1505 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 VPS41P49754 854 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 TTC21AQ8NDW8 1320 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 B4E1Z4 1266 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 ATP2A1O14983 1001 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 CALCOCO2Q13137 446 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 BIRC3Q13489 604 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 FCHSD1Q86WN1 690 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 PPFIBP2Q8ND30 876 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 HAUS7Q99871 368 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 PLVAPQ9BX97 442 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 FAM184BQ9ULE4 1060 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 BAG3O95817 575 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 LLGL1Q15334 1064 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 NELFCDQ8IXH7 590 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 LRRC59Q96AG4 307 aaKnown RBP13.87□□□□□ -0.19
ABCA3-201ENST00000301732 CBX8Q9HC52 389 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 NKIRAS1Q9NYS0 192 aa13.87□□□□□ -0.19
ABCA3-201ENST00000301732 NAA16Q6N069 864 aaPredicted RBP13.86□□□□□ -0.19
ABCA3-201ENST00000301732 PHKBQ93100 1093 aa13.86□□□□□ -0.19
ABCA3-201ENST00000301732 DISP3Q9P2K9 1392 aa13.86□□□□□ -0.19
ABCA3-201ENST00000301732 HLA-DOAP06340 250 aa13.86□□□□□ -0.19
ABCA3-201ENST00000301732 PIK3AP1Q6ZUJ8 805 aa13.86□□□□□ -0.19
ABCA3-201ENST00000301732 WDR66Q8TBY9 1149 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms