RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 ZBTB38Q8NAP3 1195 aaPredicted RBP8.14□□□□□ -1.11
DEPDC4-201ENST00000299185 ZSCAN1Q8NBB4 408 aa8.14□□□□□ -1.11
DEPDC4-201ENST00000299185 NLGN2Q8NFZ4 835 aa8.14□□□□□ -1.11
DEPDC4-201ENST00000299185 IRF7Q92985 503 aa8.14□□□□□ -1.11
DEPDC4-201ENST00000299185 ZNF594Q96JF6 807 aaPredicted RBP8.14□□□□□ -1.11
DEPDC4-201ENST00000299185 GREM2Q9H772 168 aa8.14□□□□□ -1.11
DEPDC4-201ENST00000299185 SEC31BQ9NQW1 1179 aa8.14□□□□□ -1.11
DEPDC4-201ENST00000299185 NXF1Q9UBU9 619 aaKnown RBP8.14□□□□□ -1.11
DEPDC4-201ENST00000299185 DDX19BQ9UMR2 479 aa8.14□□□□□ -1.11
DEPDC4-201ENST00000299185 PA2G4Q9UQ80 394 aaKnown RBP8.14□□□□□ -1.11
DEPDC4-201ENST00000299185 RIC1Q4ADV7 1423 aa8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 GTF2E1P29083 439 aaPredicted RBP8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 ST5P78524 1137 aa8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 TRIM28Q13263 835 aaKnown RBP8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 Q3C1V9 767 aa8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 CEP85Q6P2H3 762 aa8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 LMBR1LQ6UX01 489 aa8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 OLFM4Q6UX06 510 aa8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 PPP1R42Q7Z4L9 355 aa8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 SIRT2Q8IXJ6 389 aa8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 HPS1Q92902 700 aa8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 BCL11AQ9H165 835 aa8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 SPON1Q9HCB6 807 aa8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 ZBTB40Q9NUA8 1239 aa8.13□□□□□ -1.11
DEPDC4-201ENST00000299185 MYH3P11055 1940 aa8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 GNAI2P04899 355 aa8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 MS4A1P11836 297 aa8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 DPEP1P16444 411 aa8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 POLD1P28340 1107 aa8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 B4GALNT3Q6L9W6 998 aa8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 C2CD5Q86YS7 1000 aa8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 NLRP7Q8WX94 980 aa8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 CELF1Q92879 486 aaKnown RBP8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 SIL1Q9H173 461 aa8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 KIF13BQ9NQT8 1826 aa8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 A0A1B0GUL6 1792 aa8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 DLEC1Q9Y238 1755 aa8.12□□□□□ -1.11
DEPDC4-201ENST00000299185 A0A0G2JLW4 131 aa8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 APBB1O00213 710 aa8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 SEMA3EO15041 775 aa8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 PDE8AO60658 829 aa8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 GNAI3P08754 354 aa8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 RFX5P48382 616 aaPredicted RBP8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 MMP16P51512 607 aa8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 RNF19BQ6ZMZ0 732 aa8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 TTLL11Q8NHH1 800 aa8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 GPR101Q96P66 508 aaPredicted RBP8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 PLA2G12BQ9BX93 195 aa8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 PUS3Q9BZE2 481 aaKnown RBP8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 NYXQ9GZU5 481 aa8.11□□□□□ -1.11
DEPDC4-201ENST00000299185 LRRC37AA6NMS7 1700 aa8.1□□□□□ -1.11
DEPDC4-201ENST00000299185 SNAP23O00161 211 aa8.1□□□□□ -1.11
DEPDC4-201ENST00000299185 SRGAP3O43295 1099 aa8.1□□□□□ -1.11
DEPDC4-201ENST00000299185 IGHDP01880 384 aa8.1□□□□□ -1.11
DEPDC4-201ENST00000299185 ITGA6P23229 1130 aa8.1□□□□□ -1.11
DEPDC4-201ENST00000299185 RABL6Q3YEC7 729 aaPredicted RBP8.1□□□□□ -1.11
DEPDC4-201ENST00000299185 LRRC24Q50LG9 513 aa8.1□□□□□ -1.11
DEPDC4-201ENST00000299185 TPTE2Q6XPS3 522 aa8.1□□□□□ -1.11
DEPDC4-201ENST00000299185 FHDC1Q9C0D6 1143 aaPredicted RBP8.1□□□□□ -1.11
DEPDC4-201ENST00000299185 EXOC6BQ9Y2D4 811 aa8.1□□□□□ -1.11
DEPDC4-201ENST00000299185 GTF3C3Q9Y5Q9 886 aa8.1□□□□□ -1.11
DEPDC4-201ENST00000299185 DUOX1Q9NRD9 1551 aa8.1□□□□□ -1.11
DEPDC4-201ENST00000299185 SLX4Q8IY92 1834 aa8.09□□□□□ -1.11
DEPDC4-201ENST00000299185 WTIPA6NIX2 430 aaPredicted RBP8.09□□□□□ -1.11
DEPDC4-201ENST00000299185 SMARCA5O60264 1052 aaPredicted RBP8.09□□□□□ -1.11
DEPDC4-201ENST00000299185 GMPRP36959 345 aa8.09□□□□□ -1.11
DEPDC4-201ENST00000299185 SLC10A5Q5PT55 438 aa8.09□□□□□ -1.11
DEPDC4-201ENST00000299185 HELBQ8NG08 1087 aaPredicted RBP8.09□□□□□ -1.11
DEPDC4-201ENST00000299185 RPGRQ92834 1020 aaKnown RBP8.09□□□□□ -1.11
DEPDC4-201ENST00000299185 ZNF622Q969S3 477 aaKnown RBP eCLIP8.09□□□□□ -1.11
DEPDC4-201ENST00000299185 CSF1RP07333 972 aa8.08□□□□□ -1.12
DEPDC4-201ENST00000299185 HMGB2P26583 209 aaKnown RBP8.08□□□□□ -1.12
DEPDC4-201ENST00000299185 KLRK1P26718 216 aa8.08□□□□□ -1.12
DEPDC4-201ENST00000299185 WNT7BP56706 349 aa8.08□□□□□ -1.12
DEPDC4-201ENST00000299185 ATP8B2P98198 1209 aa8.08□□□□□ -1.12
DEPDC4-201ENST00000299185 SF3B3Q15393 1217 aaKnown RBP8.08□□□□□ -1.12
DEPDC4-201ENST00000299185 CRY2Q49AN0 593 aa8.08□□□□□ -1.12
DEPDC4-201ENST00000299185 CCDC152Q4G0S7 254 aa8.08□□□□□ -1.12
DEPDC4-201ENST00000299185 NLRP3Q96P20 1036 aa8.08□□□□□ -1.12
DEPDC4-201ENST00000299185 BRIP1Q9BX63 1249 aa8.08□□□□□ -1.12
DEPDC4-201ENST00000299185 BRCA1P38398 1863 aaKnown RBP8.08□□□□□ -1.12
DEPDC4-201ENST00000299185 LTBP1Q14766 1721 aa8.07□□□□□ -1.12
DEPDC4-201ENST00000299185 ZNF609O15014 1411 aa8.07□□□□□ -1.12
DEPDC4-201ENST00000299185 SRGNP10124 158 aa8.07□□□□□ -1.12
DEPDC4-201ENST00000299185 KCNA3P22001 575 aa8.07□□□□□ -1.12
DEPDC4-201ENST00000299185 PTPN12Q05209 780 aaKnown RBP8.07□□□□□ -1.12
DEPDC4-201ENST00000299185 MTX1Q13505 466 aa8.07□□□□□ -1.12
DEPDC4-201ENST00000299185 TAF7LQ5H9L4 462 aa8.07□□□□□ -1.12
DEPDC4-201ENST00000299185 PRPF40BQ6NWY9 871 aaKnown RBP8.07□□□□□ -1.12
DEPDC4-201ENST00000299185 OTUD7AQ8TE49 926 aaPredicted RBP8.07□□□□□ -1.12
DEPDC4-201ENST00000299185 RTL9Q8NET4 1388 aa8.07□□□□□ -1.12
DEPDC4-201ENST00000299185 COL4A5P29400 1685 aa8.06□□□□□ -1.12
DEPDC4-201ENST00000299185 ANKRD18BA2A2Z9 1011 aa8.06□□□□□ -1.12
DEPDC4-201ENST00000299185 KLRG2A4D1S0 409 aaPredicted RBP8.06□□□□□ -1.12
DEPDC4-201ENST00000299185 TAF5LO75529 589 aa8.06□□□□□ -1.12
DEPDC4-201ENST00000299185 SURF6O75683 361 aaKnown RBP8.06□□□□□ -1.12
DEPDC4-201ENST00000299185 RASSF7Q02833 373 aa8.06□□□□□ -1.12
DEPDC4-201ENST00000299185 IFIT5Q13325 482 aaKnown RBP8.06□□□□□ -1.12
DEPDC4-201ENST00000299185 OS9Q13438 667 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms