RNA–Protein interactions for RNA: ENST00000297537.4

GBX1-201, Transcript of gastrulation brain homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GBX1, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBX1-201ENST00000297537 CCDC8Q9H0W5 538 aaPredicted RBP28.77■■■□□ 2.2
GBX1-201ENST00000297537 SUPT16HQ9Y5B9 1047 aaKnown RBP28.77■■■□□ 2.2
GBX1-201ENST00000297537 UQCRFS1P1P0C7P4 283 aa28.76■■■□□ 2.19
GBX1-201ENST00000297537 PRDX5P30044 214 aa28.76■■■□□ 2.19
GBX1-201ENST00000297537 RBM5P52756 815 aaKnown RBP eCLIP28.76■■■□□ 2.19
GBX1-201ENST00000297537 TLR7Q9NYK1 1049 aaKnown RBP28.76■■■□□ 2.19
GBX1-201ENST00000297537 MAST3O60307 1309 aa28.75■■■□□ 2.19
GBX1-201ENST00000297537 TRPM7Q96QT4 1865 aa28.75■■■□□ 2.19
GBX1-201ENST00000297537 CELF2O95319 508 aaKnown RBP28.75■■■□□ 2.19
GBX1-201ENST00000297537 MCAMP43121 646 aa28.75■■■□□ 2.19
GBX1-201ENST00000297537 CCDC158Q5M9N0 1113 aa28.75■■■□□ 2.19
GBX1-201ENST00000297537 HHIPL2Q6UWX4 724 aa28.75■■■□□ 2.19
GBX1-201ENST00000297537 ZGPATQ8N5A5 531 aaKnown RBP28.75■■■□□ 2.19
GBX1-201ENST00000297537 SPATA5Q8NB90 893 aa28.75■■■□□ 2.19
GBX1-201ENST00000297537 IL1RAPL2Q9NP60 686 aa28.75■■■□□ 2.19
GBX1-201ENST00000297537 SCAF8Q9UPN6 1271 aaKnown RBP28.75■■■□□ 2.19
GBX1-201ENST00000297537 PI16Q6UXB8 463 aa28.74■■■□□ 2.19
GBX1-201ENST00000297537 TEKT1Q969V4 418 aa28.74■■■□□ 2.19
GBX1-201ENST00000297537 ZDHHC15Q96MV8 337 aa28.74■■■□□ 2.19
GBX1-201ENST00000297537 DCTPP1Q9H773 170 aa28.74■■■□□ 2.19
GBX1-201ENST00000297537 MYO1BO43795 1136 aa28.73■■■□□ 2.19
GBX1-201ENST00000297537 LDHBP07195 334 aaKnown RBP28.73■■■□□ 2.19
GBX1-201ENST00000297537 AACSQ86V21 672 aa28.73■■■□□ 2.19
GBX1-201ENST00000297537 APOBEC3FQ8IUX4 373 aaKnown RBP28.73■■■□□ 2.19
GBX1-201ENST00000297537 APBB1O00213 710 aa28.72■■■□□ 2.19
GBX1-201ENST00000297537 TTC39AQ5SRH9 613 aa28.72■■■□□ 2.19
GBX1-201ENST00000297537 APOBEC3HQ6NTF7 200 aaKnown RBP28.72■■■□□ 2.19
GBX1-201ENST00000297537 CLASRPQ8N2M8 674 aaKnown RBP28.72■■■□□ 2.19
GBX1-201ENST00000297537 KLRG1Q96E93 195 aa28.72■■■□□ 2.19
GBX1-201ENST00000297537 CDCA5Q96FF9 252 aa28.72■■■□□ 2.19
GBX1-201ENST00000297537 AAMPQ13685 434 aa28.71■■■□□ 2.19
GBX1-201ENST00000297537 SPDYE2Q495Y8 402 aa28.71■■■□□ 2.19
GBX1-201ENST00000297537 TDRD3Q9H7E2 651 aaKnown RBP28.71■■■□□ 2.19
GBX1-201ENST00000297537 CLRN2A0PK11 232 aa28.7■■■□□ 2.18
GBX1-201ENST00000297537 ZNF408Q9H9D4 720 aa28.7■■■□□ 2.18
GBX1-201ENST00000297537 ZNF70Q9UC06 446 aaPredicted RBP28.7■■■□□ 2.18
GBX1-201ENST00000297537 TLL2Q9Y6L7 1015 aa28.7■■■□□ 2.18
GBX1-201ENST00000297537 ECM29Q5VYK3 1845 aa28.69■■■□□ 2.18
GBX1-201ENST00000297537 RASSF10A6NK89 507 aa28.69■■■□□ 2.18
GBX1-201ENST00000297537 SPTY2D1Q68D10 685 aaPredicted RBP28.69■■■□□ 2.18
GBX1-201ENST00000297537 SAPCD2Q86UD0 394 aa28.69■■■□□ 2.18
GBX1-201ENST00000297537 DEFB129Q9H1M3 183 aa28.69■■■□□ 2.18
GBX1-201ENST00000297537 ABCF2Q9UG63 623 aa28.69■■■□□ 2.18
GBX1-201ENST00000297537 CNTNAP1P78357 1384 aa28.68■■■□□ 2.18
GBX1-201ENST00000297537 DIXDC1Q155Q3 683 aa28.68■■■□□ 2.18
GBX1-201ENST00000297537 AKAP11Q9UKA4 1901 aa28.68■■■□□ 2.18
GBX1-201ENST00000297537 PRAMEF18Q5VWM3 479 aa28.67■■■□□ 2.18
GBX1-201ENST00000297537 TBC1D9Q6ZT07 1266 aa28.67■■■□□ 2.18
GBX1-201ENST00000297537 FAM163AQ96GL9 167 aaPredicted RBP28.67■■■□□ 2.18
GBX1-201ENST00000297537 LRRCC1Q9C099 1032 aa28.67■■■□□ 2.18
GBX1-201ENST00000297537 ABT1Q9ULW3 272 aaKnown RBP28.67■■■□□ 2.18
GBX1-201ENST00000297537 DAGLAQ9Y4D2 1042 aa28.67■■■□□ 2.18
GBX1-201ENST00000297537 DEFB115Q30KQ5 88 aa28.66■■■□□ 2.18
GBX1-201ENST00000297537 ERICH6Q7L0X2 663 aa28.66■■■□□ 2.18
GBX1-201ENST00000297537 ZNF384Q8TF68 577 aa28.66■■■□□ 2.18
GBX1-201ENST00000297537 SNRKQ9NRH2 765 aa28.66■■■□□ 2.18
GBX1-201ENST00000297537 PPP2R3BQ9Y5P8 575 aa28.66■■■□□ 2.18
GBX1-201ENST00000297537 PCNTO95613 3336 aa28.66■■■□□ 2.18
GBX1-201ENST00000297537 CYP2E1P05181 493 aaPredicted RBP28.65■■■□□ 2.18
GBX1-201ENST00000297537 EXOC6Q8TAG9 804 aa28.65■■■□□ 2.18
GBX1-201ENST00000297537 HHIPL1Q96JK4 782 aa28.65■■■□□ 2.18
GBX1-201ENST00000297537 VEZTQ9HBM0 779 aa28.65■■■□□ 2.18
GBX1-201ENST00000297537 GBA2Q9HCG7 927 aaPredicted RBP28.65■■■□□ 2.18
GBX1-201ENST00000297537 MKRN1Q9UHC7 482 aaKnown RBP28.65■■■□□ 2.18
GBX1-201ENST00000297537 IFIT2P09913 472 aaKnown RBP28.64■■■□□ 2.18
GBX1-201ENST00000297537 MECOMQ03112 1051 aa28.64■■■□□ 2.18
GBX1-201ENST00000297537 GAKO14976 1311 aa28.64■■■□□ 2.17
GBX1-201ENST00000297537 ZAP70P43403 619 aa28.63■■■□□ 2.17
GBX1-201ENST00000297537 RASA3Q14644 834 aa28.63■■■□□ 2.17
GBX1-201ENST00000297537 DZIP1Q86YF9 867 aaKnown RBP28.63■■■□□ 2.17
GBX1-201ENST00000297537 C2orf69Q8N8R5 385 aa28.63■■■□□ 2.17
GBX1-201ENST00000297537 JMYQ8N9B5 988 aa28.63■■■□□ 2.17
GBX1-201ENST00000297537 NSUN4Q96CB9 384 aaKnown RBP28.63■■■□□ 2.17
GBX1-201ENST00000297537 SMARCA5O60264 1052 aaPredicted RBP28.62■■■□□ 2.17
GBX1-201ENST00000297537 HDAC1Q13547 482 aaPredicted RBP28.62■■■□□ 2.17
GBX1-201ENST00000297537 TNFAIP1Q13829 316 aa28.62■■■□□ 2.17
GBX1-201ENST00000297537 FKBP1CQ5VVH2 108 aa28.62■■■□□ 2.17
GBX1-201ENST00000297537 IGSF3O75054 1194 aa28.61■■■□□ 2.17
GBX1-201ENST00000297537 FKBP1BP68106 108 aa28.61■■■□□ 2.17
GBX1-201ENST00000297537 CDC42EP5Q6NZY7 148 aa28.61■■■□□ 2.17
GBX1-201ENST00000297537 SLF2Q8IX21 1173 aa28.61■■■□□ 2.17
GBX1-201ENST00000297537 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.61■■■□□ 2.17
GBX1-201ENST00000297537 VEGFBP49765 207 aa28.6■■■□□ 2.17
GBX1-201ENST00000297537 TEPSINQ96N21 525 aa28.6■■■□□ 2.17
GBX1-201ENST00000297537 LRP2BPQ9P2M1 347 aa28.6■■■□□ 2.17
GBX1-201ENST00000297537 TCP10L2B9ZVM9 353 aa28.59■■■□□ 2.17
GBX1-201ENST00000297537 HUNKP57058 714 aa28.59■■■□□ 2.17
GBX1-201ENST00000297537 RAI14Q9P0K7 980 aa28.59■■■□□ 2.17
GBX1-201ENST00000297537 CACNB3P54284 484 aa28.58■■■□□ 2.17
GBX1-201ENST00000297537 FAM83AQ86UY5 434 aa28.58■■■□□ 2.17
GBX1-201ENST00000297537 PIH1D3Q9NQM4 214 aaKnown RBP28.58■■■□□ 2.17
GBX1-201ENST00000297537 NDUFB9Q9Y6M9 179 aa28.58■■■□□ 2.17
GBX1-201ENST00000297537 MROH7-TTC4A0A0A0MT08 1334 aa28.58■■■□□ 2.17
GBX1-201ENST00000297537 MYH2Q9UKX2 1941 aa28.57■■■□□ 2.16
GBX1-201ENST00000297537 GPR75-ASB3A0A0A6YYF3 556 aa28.57■■■□□ 2.16
GBX1-201ENST00000297537 NF2P35240 595 aa28.57■■■□□ 2.16
GBX1-201ENST00000297537 TNNI2P48788 182 aa28.57■■■□□ 2.16
GBX1-201ENST00000297537 NBPF12Q5TAG4 269 aaPredicted RBP28.57■■■□□ 2.16
GBX1-201ENST00000297537 USP40Q9NVE5 1235 aa28.57■■■□□ 2.16
GBX1-201ENST00000297537 TMOD2Q9NZR1 351 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms