RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 TBC1D10CQ8IV04 446 aa16.09■□□□□ 0.17
CHMP4C-201ENST00000297265 IFNL3Q8IZI9 196 aa16.09■□□□□ 0.17
CHMP4C-201ENST00000297265 LCORLQ8N3X6 602 aa16.09■□□□□ 0.17
CHMP4C-201ENST00000297265 GRAPLQ8TC17 118 aaPredicted RBP16.09■□□□□ 0.17
CHMP4C-201ENST00000297265 LRP2BPQ9P2M1 347 aa16.09■□□□□ 0.17
CHMP4C-201ENST00000297265 NSFL1CQ9UNZ2 370 aaKnown RBP16.09■□□□□ 0.17
CHMP4C-201ENST00000297265 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
CHMP4C-201ENST00000297265 PNPLA7Q6ZV29 1317 aa16.08■□□□□ 0.17
CHMP4C-201ENST00000297265 PDIA3P30101 505 aaKnown RBP16.08■□□□□ 0.17
CHMP4C-201ENST00000297265 ZNF827Q17R98 1081 aa16.08■□□□□ 0.17
CHMP4C-201ENST00000297265 FOXD4L6Q3SYB3 417 aaPredicted RBP16.08■□□□□ 0.17
CHMP4C-201ENST00000297265 FOXD4L3Q6VB84 417 aaPredicted RBP16.08■□□□□ 0.17
CHMP4C-201ENST00000297265 SMARCC2Q8TAQ2 1214 aa16.08■□□□□ 0.17
CHMP4C-201ENST00000297265 GNL3LQ9NVN8 582 aaKnown RBP16.08■□□□□ 0.17
CHMP4C-201ENST00000297265 POLRMTO00411 1230 aaKnown RBP16.08■□□□□ 0.16
CHMP4C-201ENST00000297265 ZBTB22O15209 634 aa16.08■□□□□ 0.16
CHMP4C-201ENST00000297265 LARP1BQ659C4 914 aaKnown RBP16.08■□□□□ 0.16
CHMP4C-201ENST00000297265 ZNF274Q96GC6 653 aaPredicted RBP16.08■□□□□ 0.16
CHMP4C-201ENST00000297265 TFCP2L1Q9NZI6 479 aa16.08■□□□□ 0.16
CHMP4C-201ENST00000297265 APPP05067 770 aa16.07■□□□□ 0.16
CHMP4C-201ENST00000297265 NCOA7Q8NI08 942 aa16.07■□□□□ 0.16
CHMP4C-201ENST00000297265 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
CHMP4C-201ENST00000297265 GDPD2Q9HCC8 539 aa16.07■□□□□ 0.16
CHMP4C-201ENST00000297265 ABCF2Q9UG63 623 aa16.07■□□□□ 0.16
CHMP4C-201ENST00000297265 KLRG2A4D1S0 409 aaPredicted RBP16.06■□□□□ 0.16
CHMP4C-201ENST00000297265 SEMA3EO15041 775 aa16.06■□□□□ 0.16
CHMP4C-201ENST00000297265 NPHP1O15259 732 aa16.06■□□□□ 0.16
CHMP4C-201ENST00000297265 HIBADHP31937 336 aaKnown RBP16.06■□□□□ 0.16
CHMP4C-201ENST00000297265 MCM5P33992 734 aa16.06■□□□□ 0.16
CHMP4C-201ENST00000297265 GAS2L3Q86XJ1 694 aa16.06■□□□□ 0.16
CHMP4C-201ENST00000297265 MIGA1Q8NAN2 632 aa16.06■□□□□ 0.16
CHMP4C-201ENST00000297265 NSUN7Q8NE18 718 aaKnown RBP16.06■□□□□ 0.16
CHMP4C-201ENST00000297265 INCENPQ9NQS7 918 aa16.06■□□□□ 0.16
CHMP4C-201ENST00000297265 BRPF3Q9ULD4 1205 aa16.06■□□□□ 0.16
CHMP4C-201ENST00000297265 PDS5AQ29RF7 1337 aaKnown RBP16.06■□□□□ 0.16
CHMP4C-201ENST00000297265 PRC1O43663 620 aa16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 CYB5R4Q7L1T6 521 aa16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 CDC37L1Q7L3B6 337 aa16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 VPS37DQ86XT2 251 aa16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 TMEM87AQ8NBN3 555 aa16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 RIOK1Q9BRS2 568 aaKnown RBP16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 MYH13Q9UKX3 1938 aa16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 WDR19Q8NEZ3 1342 aa16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 SALL1Q9NSC2 1324 aa16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 CYP7A1P22680 504 aa16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 FGD1P98174 961 aa16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 USP48Q86UV5 1035 aa16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 LLPHQ9BRT6 129 aaKnown RBP16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 NCOA5Q9HCD5 579 aaKnown RBP16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 HPS5Q9UPZ3 1129 aa16.05■□□□□ 0.16
CHMP4C-201ENST00000297265 GADD45BO75293 160 aaPredicted RBP16.04■□□□□ 0.16
CHMP4C-201ENST00000297265 APBA3O96018 575 aa16.04■□□□□ 0.16
CHMP4C-201ENST00000297265 PDIA4P13667 645 aaKnown RBP16.04■□□□□ 0.16
CHMP4C-201ENST00000297265 CCT2P78371 535 aaKnown RBP16.04■□□□□ 0.16
CHMP4C-201ENST00000297265 COL23A1Q86Y22 540 aaPredicted RBP16.04■□□□□ 0.16
CHMP4C-201ENST00000297265 RAI14Q9P0K7 980 aa16.04■□□□□ 0.16
CHMP4C-201ENST00000297265 RGS17Q9UGC6 210 aaPredicted RBP16.04■□□□□ 0.16
CHMP4C-201ENST00000297265 CNPY2Q9Y2B0 182 aa16.04■□□□□ 0.16
CHMP4C-201ENST00000297265 NEDD4P46934 1319 aa16.04■□□□□ 0.16
CHMP4C-201ENST00000297265 GNAT2P19087 354 aa16.03■□□□□ 0.16
CHMP4C-201ENST00000297265 HOXA10P31260 410 aaPredicted RBP16.03■□□□□ 0.16
CHMP4C-201ENST00000297265 NSUN4Q96CB9 384 aaKnown RBP16.03■□□□□ 0.16
CHMP4C-201ENST00000297265 LEMD3Q9Y2U8 911 aa16.03■□□□□ 0.16
CHMP4C-201ENST00000297265 SLC4A4Q9Y6R1 1079 aa16.03■□□□□ 0.16
CHMP4C-201ENST00000297265 CHD4Q14839 1912 aa16.03■□□□□ 0.16
CHMP4C-201ENST00000297265 TIAM2Q8IVF5 1701 aa16.03■□□□□ 0.16
CHMP4C-201ENST00000297265 VPS37CA5D8V6 355 aaPredicted RBP16.03■□□□□ 0.16
CHMP4C-201ENST00000297265 PDCP20941 246 aa16.03■□□□□ 0.16
CHMP4C-201ENST00000297265 CTDSPL2Q05D32 466 aa16.03■□□□□ 0.16
CHMP4C-201ENST00000297265 NAPBQ9H115 298 aa16.03■□□□□ 0.16
CHMP4C-201ENST00000297265 ANKRD31Q8N7Z5 1873 aa16.02■□□□□ 0.16
CHMP4C-201ENST00000297265 B4E1Z4 1266 aa16.02■□□□□ 0.16
CHMP4C-201ENST00000297265 SMIM22K7EJ46 135 aa16.02■□□□□ 0.16
CHMP4C-201ENST00000297265 FDPSP14324 419 aaKnown RBP16.02■□□□□ 0.16
CHMP4C-201ENST00000297265 RXRBP28702 533 aa16.02■□□□□ 0.16
CHMP4C-201ENST00000297265 ST5P78524 1137 aa16.02■□□□□ 0.16
CHMP4C-201ENST00000297265 DNM1Q05193 864 aaKnown RBP16.02■□□□□ 0.16
CHMP4C-201ENST00000297265 CAVIN1Q6NZI2 390 aaKnown RBP16.02■□□□□ 0.16
CHMP4C-201ENST00000297265 C15orf52Q6ZUT6 534 aaKnown RBP16.02■□□□□ 0.16
CHMP4C-201ENST00000297265 RALYLQ86SE5 291 aaKnown RBP16.02■□□□□ 0.16
CHMP4C-201ENST00000297265 IGDCC4Q8TDY8 1250 aa16.02■□□□□ 0.16
CHMP4C-201ENST00000297265 SENP2Q9HC62 589 aa16.02■□□□□ 0.16
CHMP4C-201ENST00000297265 XDHP47989 1333 aa16.02■□□□□ 0.15
CHMP4C-201ENST00000297265 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.15
CHMP4C-201ENST00000297265 PRDX5P30044 214 aa16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 DYNLL1P63167 89 aaKnown RBP16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 GPSM2P81274 684 aa16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 MECOMQ03112 1051 aa16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 SDR42E1Q8WUS8 393 aa16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 RPGRQ92834 1020 aaKnown RBP16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 DDX11Q96FC9 970 aa16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 TMEM63CQ9P1W3 806 aa16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 ZSWIM5Q9P217 1185 aa16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 ANKIB1Q9P2G1 1089 aa16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 RBM27Q9P2N5 1060 aaKnown RBP16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 MAGEB6P1A0A0J9YX57 407 aa16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 FAM173BQ6P4H8 233 aa16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 FERMT3Q86UX7 667 aa16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 TDRD7Q8NHU6 1098 aaKnown RBP16.01■□□□□ 0.15
CHMP4C-201ENST00000297265 GPR101Q96P66 508 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms