RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 SPEF2Q9C093 1822 aa18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 BCAMP50895 628 aa18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 RBM10P98175 930 aaKnown RBP18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 CTDSPL2Q05D32 466 aa18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 SPATA5Q8NB90 893 aa18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 LPIN2Q92539 896 aa18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 MYH3P11055 1940 aa18.47■□□□□ 0.55
NCKIPSD-201ENST00000294129 A0A1B0GVL5 298 aa18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 KINO60870 393 aaKnown RBP18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 MBD4O95243 580 aa18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 INTS5Q6P9B9 1019 aaKnown RBP18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 PHKBQ93100 1093 aa18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 RCOR1Q9UKL0 485 aa18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 CLIC4Q9Y696 253 aa18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 LRP6O75581 1613 aa18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 MYH7P12883 1935 aa18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 ERVV-1B6SEH8 477 aa18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 SLC5A1P13866 664 aa18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 STK38Q15208 465 aa18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 UTP14AQ9BVJ6 771 aaKnown RBP18.46■□□□□ 0.55
NCKIPSD-201ENST00000294129 LOC102724428A0A0B4J2F2 783 aa18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 DHX16O60231 1041 aaKnown RBP18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 EIF5P55010 431 aaKnown RBP18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 SIK1P57059 783 aa18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 ITPK1Q13572 414 aa18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 MIGA1Q8NAN2 632 aa18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 PTGS1P23219 599 aa18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 BICDL1Q6ZP65 573 aa18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 NEDD4P46934 1319 aa18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 UQCRHLA0A096LP55 91 aa18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 KCNQ2O43526 872 aa18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 PRKAB2O43741 272 aa18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 UQCRHP07919 91 aa18.45■□□□□ 0.54
NCKIPSD-201ENST00000294129 UQCRFS1P1P0C7P4 283 aa18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 METAP2P50579 478 aaKnown RBP eCLIP18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 NOLC1Q14978 699 aaKnown RBP eCLIP18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 C11orf57Q6ZUT1 292 aaPredicted RBP18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 TICAM2Q86XR7 235 aa18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 MARCH10Q8NA82 808 aaPredicted RBP18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 ZKSCAN3Q9BRR0 538 aa18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 NAPBQ9H115 298 aa18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 PYCARDQ9ULZ3 195 aa18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 PCDHA7Q9UN72 937 aa18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 ANGEL1Q9UNK9 670 aaKnown RBP18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 WTIPA6NIX2 430 aaPredicted RBP18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 NRBP1Q9UHY1 535 aa18.44■□□□□ 0.54
NCKIPSD-201ENST00000294129 MROH5Q6ZUA9 1318 aa18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 KIF28PB7ZC32 967 aa18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 UBE2Q2LH0YL09 131 aa18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 UBE3CQ15386 1083 aa18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 CCDC82Q8N4S0 544 aa18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 SDF4Q9BRK5 362 aa18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 KCNF1Q9H3M0 494 aa18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 ARID4AP29374 1257 aaPredicted RBP18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 MAP3K12Q12852 859 aa18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 FBXO18Q8NFZ0 1043 aa18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 STRBPQ96SI9 672 aaKnown RBP18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 ABCF2Q9UG63 623 aa18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 SLIT2O94813 1529 aa18.43■□□□□ 0.54
NCKIPSD-201ENST00000294129 IGHMBP2P38935 993 aaKnown RBP18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 GNL2Q13823 731 aaKnown RBP18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 GOLGA6L19H0YKK7 550 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 SNW1Q13573 536 aaKnown RBP18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 TMEM67Q5HYA8 995 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 SYNE3Q6ZMZ3 975 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 PIBF1Q8WXW3 757 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 ZMYND15Q9H091 742 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 EPB41L4AQ9HCS5 686 aaPredicted RBP18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 LRP2BPQ9P2M1 347 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 TCRBV5S4A2TA0A5A2 114 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 FGFR2P21802 821 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 MARCKSP29966 332 aaPredicted RBP18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 CDC27P30260 824 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 TDO2P48775 406 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 EVCP57679 992 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 PIP4K2BP78356 416 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 RBM43Q6ZSC3 357 aaKnown RBP18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 CCDC186Q7Z3E2 898 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 ABCC12Q96J65 1359 aa18.42■□□□□ 0.54
NCKIPSD-201ENST00000294129 DOT1LQ8TEK3 1739 aa18.41■□□□□ 0.54
NCKIPSD-201ENST00000294129 FAM160A1Q05DH4 1040 aa18.41■□□□□ 0.54
NCKIPSD-201ENST00000294129 CCDC152Q4G0S7 254 aa18.41■□□□□ 0.54
NCKIPSD-201ENST00000294129 ALG1Q9BT22 464 aa18.41■□□□□ 0.54
NCKIPSD-201ENST00000294129 GOLGA6L6A8MZA4 724 aa18.41■□□□□ 0.54
NCKIPSD-201ENST00000294129 NDUFA8P51970 172 aa18.41■□□□□ 0.54
NCKIPSD-201ENST00000294129 LRMPQ12912 555 aa18.41■□□□□ 0.54
NCKIPSD-201ENST00000294129 IFNL3Q8IZI9 196 aa18.41■□□□□ 0.54
NCKIPSD-201ENST00000294129 FAM13BQ9NYF5 915 aa18.41■□□□□ 0.54
NCKIPSD-201ENST00000294129 COL14A1Q05707 1796 aaKnown RBP18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 ANKRD36CQ5JPF3 1778 aa18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 CAMTA2O94983 1202 aa18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 APOA5Q6Q788 366 aa18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 LCORLQ8N3X6 602 aa18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 ARID3AQ99856 593 aa18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 PDCL3Q9H2J4 239 aa18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 BECN2A8MW95 431 aa18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 BIN1O00499 593 aa18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 SH2B2O14492 632 aaPredicted RBP18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 IFIT3O14879 490 aaKnown RBP18.4■□□□□ 0.54
NCKIPSD-201ENST00000294129 MYSM1Q5VVJ2 828 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms