RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 FANCLQ9NW38 375 aa16.97■□□□□ 0.31
CCNF-201ENST00000293968 FGAP02671 866 aa16.96■□□□□ 0.31
CCNF-201ENST00000293968 PNMA6AP0CW24 399 aaPredicted RBP16.96■□□□□ 0.31
CCNF-201ENST00000293968 CASQ1P31415 396 aa16.96■□□□□ 0.31
CCNF-201ENST00000293968 IL15P40933 162 aaPredicted RBP16.96■□□□□ 0.31
CCNF-201ENST00000293968 MYL5Q02045 173 aa16.96■□□□□ 0.31
CCNF-201ENST00000293968 PI16Q6UXB8 463 aa16.96■□□□□ 0.31
CCNF-201ENST00000293968 KARSQ15046 597 aaKnown RBP16.96■□□□□ 0.31
CCNF-201ENST00000293968 CHRNA2Q15822 529 aa16.96■□□□□ 0.31
CCNF-201ENST00000293968 JMYQ8N9B5 988 aa16.96■□□□□ 0.31
CCNF-201ENST00000293968 CWC25Q9NXE8 425 aaPredicted RBP16.96■□□□□ 0.31
CCNF-201ENST00000293968 VGLL3A8MV65 326 aa16.96■□□□□ 0.31
CCNF-201ENST00000293968 WDHD1O75717 1129 aaPredicted RBP16.96■□□□□ 0.31
CCNF-201ENST00000293968 CCDC57Q2TAC2 916 aa16.96■□□□□ 0.31
CCNF-201ENST00000293968 LRRFIP1Q32MZ4 808 aaKnown RBP16.96■□□□□ 0.31
CCNF-201ENST00000293968 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.31
CCNF-201ENST00000293968 BRAPQ7Z569 592 aa16.96■□□□□ 0.31
CCNF-201ENST00000293968 MYL10Q9BUA6 226 aa16.96■□□□□ 0.31
CCNF-201ENST00000293968 ADORA1P30542 326 aa16.96■□□□□ 0.3
CCNF-201ENST00000293968 NEK11Q8NG66 645 aa16.96■□□□□ 0.3
CCNF-201ENST00000293968 POLR3EQ9NVU0 708 aa16.96■□□□□ 0.3
CCNF-201ENST00000293968 ZSCAN12O43309 604 aa16.95■□□□□ 0.3
CCNF-201ENST00000293968 METAP2P50579 478 aaKnown RBP eCLIP16.95■□□□□ 0.3
CCNF-201ENST00000293968 CALCOCO1Q9P1Z2 691 aa16.95■□□□□ 0.3
CCNF-201ENST00000293968 ANKARQ7Z5J8 1434 aa16.95■□□□□ 0.3
CCNF-201ENST00000293968 IFNL2Q8IZJ0 200 aa16.95■□□□□ 0.3
CCNF-201ENST00000293968 CPLX3Q8WVH0 158 aa16.95■□□□□ 0.3
CCNF-201ENST00000293968 EYA2O00167 538 aa16.95■□□□□ 0.3
CCNF-201ENST00000293968 ADKP55263 362 aaKnown RBP16.95■□□□□ 0.3
CCNF-201ENST00000293968 ZFP91Q96JP5 570 aaPredicted RBP16.95■□□□□ 0.3
CCNF-201ENST00000293968 IDH1O75874 414 aaKnown RBP16.94■□□□□ 0.3
CCNF-201ENST00000293968 CMA1P23946 247 aa16.94■□□□□ 0.3
CCNF-201ENST00000293968 KIF23Q02241 960 aaPredicted RBP16.94■□□□□ 0.3
CCNF-201ENST00000293968 JCADQ9P266 1359 aa16.94■□□□□ 0.3
CCNF-201ENST00000293968 MROH7-TTC4A0A0A0MT08 1334 aa16.94■□□□□ 0.3
CCNF-201ENST00000293968 KRT28Q7Z3Y7 464 aa16.94■□□□□ 0.3
CCNF-201ENST00000293968 VPS37DQ86XT2 251 aa16.94■□□□□ 0.3
CCNF-201ENST00000293968 TRMT44Q8IYL2 757 aaKnown RBP16.94■□□□□ 0.3
CCNF-201ENST00000293968 DESI2Q9BSY9 194 aa16.94■□□□□ 0.3
CCNF-201ENST00000293968 ZCCHC17Q9NP64 241 aaKnown RBP16.94■□□□□ 0.3
CCNF-201ENST00000293968 ZNF827Q17R98 1081 aa16.94■□□□□ 0.3
CCNF-201ENST00000293968 ATG9AQ7Z3C6 839 aa16.94■□□□□ 0.3
CCNF-201ENST00000293968 CABLES1Q8TDN4 633 aa16.94■□□□□ 0.3
CCNF-201ENST00000293968 ERBB3P21860 1342 aa16.94■□□□□ 0.3
CCNF-201ENST00000293968 PHKG2P15735 406 aa16.93■□□□□ 0.3
CCNF-201ENST00000293968 CCDC102BQ68D86 513 aa16.93■□□□□ 0.3
CCNF-201ENST00000293968 PLBD2Q8NHP8 589 aa16.93■□□□□ 0.3
CCNF-201ENST00000293968 L2HGDHQ9H9P8 463 aa16.93■□□□□ 0.3
CCNF-201ENST00000293968 RRP12Q5JTH9 1297 aaKnown RBP16.93■□□□□ 0.3
CCNF-201ENST00000293968 ZAP70P43403 619 aa16.93■□□□□ 0.3
CCNF-201ENST00000293968 NCAPHQ15003 741 aa16.93■□□□□ 0.3
CCNF-201ENST00000293968 RABL6Q3YEC7 729 aaPredicted RBP16.93■□□□□ 0.3
CCNF-201ENST00000293968 KRT40Q6A162 431 aa16.93■□□□□ 0.3
CCNF-201ENST00000293968 PUS7LQ9H0K6 701 aaKnown RBP16.93■□□□□ 0.3
CCNF-201ENST00000293968 DENND2AQ9ULE3 1009 aa16.93■□□□□ 0.3
CCNF-201ENST00000293968 FHOD1Q9Y613 1164 aa16.93■□□□□ 0.3
CCNF-201ENST00000293968 UBR1Q8IWV7 1749 aa16.93■□□□□ 0.3
CCNF-201ENST00000293968 SALL1Q9NSC2 1324 aa16.93■□□□□ 0.3
CCNF-201ENST00000293968 A1BGP04217 495 aa16.92■□□□□ 0.3
CCNF-201ENST00000293968 KLHL10Q6JEL2 608 aa16.92■□□□□ 0.3
CCNF-201ENST00000293968 H2AFXP16104 143 aaPredicted RBP16.92■□□□□ 0.3
CCNF-201ENST00000293968 BAG1Q99933 345 aaPredicted RBP16.92■□□□□ 0.3
CCNF-201ENST00000293968 DHX8Q14562 1220 aaKnown RBP16.92■□□□□ 0.3
CCNF-201ENST00000293968 PPP2R2CQ9Y2T4 447 aa16.92■□□□□ 0.3
CCNF-201ENST00000293968 CCDC12Q8WUD4 166 aaPredicted RBP16.92■□□□□ 0.3
CCNF-201ENST00000293968 XAGE2Q96GT9 111 aa16.92■□□□□ 0.3
CCNF-201ENST00000293968 SLC26A6Q9BXS9 759 aa16.92■□□□□ 0.3
CCNF-201ENST00000293968 GPAA1O43292 621 aa16.91■□□□□ 0.3
CCNF-201ENST00000293968 SLC39A14Q15043 492 aa16.91■□□□□ 0.3
CCNF-201ENST00000293968 FOXN1O15353 648 aa16.91■□□□□ 0.3
CCNF-201ENST00000293968 AXDND1Q5T1B0 1012 aaPredicted RBP16.91■□□□□ 0.3
CCNF-201ENST00000293968 DDX17Q92841 729 aaKnown RBP16.91■□□□□ 0.3
CCNF-201ENST00000293968 LZTFL1Q9NQ48 299 aa16.91■□□□□ 0.3
CCNF-201ENST00000293968 PCDHA5Q9Y5H7 936 aa16.91■□□□□ 0.3
CCNF-201ENST00000293968 B4E1Z4 1266 aa16.91■□□□□ 0.3
CCNF-201ENST00000293968 IARSP41252 1262 aaKnown RBP16.91■□□□□ 0.3
CCNF-201ENST00000293968 FOXO4P98177 505 aa16.91■□□□□ 0.3
CCNF-201ENST00000293968 KCNH3Q9ULD8 1083 aa16.91■□□□□ 0.3
CCNF-201ENST00000293968 GYS2P54840 703 aa16.9■□□□□ 0.3
CCNF-201ENST00000293968 PPP2R3AQ06190 1150 aa16.9■□□□□ 0.3
CCNF-201ENST00000293968 LONRF3Q496Y0 759 aa16.9■□□□□ 0.3
CCNF-201ENST00000293968 NCAPD2Q15021 1401 aa16.9■□□□□ 0.3
CCNF-201ENST00000293968 GOLGA8AA7E2F4 631 aa16.9■□□□□ 0.3
CCNF-201ENST00000293968 OAS2P29728 719 aaKnown RBP16.9■□□□□ 0.3
CCNF-201ENST00000293968 PLA2G4AP47712 749 aa16.9■□□□□ 0.3
CCNF-201ENST00000293968 ANKLE2Q86XL3 938 aa16.9■□□□□ 0.3
CCNF-201ENST00000293968 BPIFA3Q9BQP9 254 aa16.9■□□□□ 0.3
CCNF-201ENST00000293968 AGXT2Q9BYV1 514 aa16.9■□□□□ 0.3
CCNF-201ENST00000293968 HPS5Q9UPZ3 1129 aa16.9■□□□□ 0.3
CCNF-201ENST00000293968 HEG1Q9ULI3 1381 aa16.9■□□□□ 0.3
CCNF-201ENST00000293968 HNRNPH2P55795 449 aaKnown RBP16.9■□□□□ 0.3
CCNF-201ENST00000293968 SCARF1Q14162 830 aa16.9■□□□□ 0.3
CCNF-201ENST00000293968 GPS2Q13227 327 aa16.89■□□□□ 0.3
CCNF-201ENST00000293968 SHC4Q6S5L8 630 aa16.89■□□□□ 0.3
CCNF-201ENST00000293968 WDR24Q96S15 920 aa16.89■□□□□ 0.3
CCNF-201ENST00000293968 PUF60Q9UHX1 559 aaKnown RBP16.89■□□□□ 0.3
CCNF-201ENST00000293968 HOOK1Q9UJC3 728 aaKnown RBP16.89■□□□□ 0.3
CCNF-201ENST00000293968 IKBKBO14920 756 aa16.89■□□□□ 0.29
CCNF-201ENST00000293968 CDKL5O76039 1030 aa16.89■□□□□ 0.29
CCNF-201ENST00000293968 SLC9C2Q5TAH2 1124 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms