RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SAMM50Q9Y512 469 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 BMP15O95972 392 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 ZFYP08048 801 aaPredicted RBP12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 MARCKSP29966 332 aaPredicted RBP12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 FLIIQ13045 1269 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 KAT14Q9H8E8 782 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 KCNK9Q9NPC2 374 aa12.15□□□□□ -0.46
PKNOX1-201ENST00000291547 TPD52P55327 224 aaPredicted RBP12.15□□□□□ -0.47
PKNOX1-201ENST00000291547 GSTA5Q7RTV2 222 aa12.15□□□□□ -0.47
PKNOX1-201ENST00000291547 LMBR1Q8WVP7 490 aa12.15□□□□□ -0.47
PKNOX1-201ENST00000291547 ALG1Q9BT22 464 aa12.15□□□□□ -0.47
PKNOX1-201ENST00000291547 ANKIB1Q9P2G1 1089 aa12.15□□□□□ -0.47
PKNOX1-201ENST00000291547 NDC80O14777 642 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 SF3B2Q13435 895 aaKnown RBP12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 MIPOL1Q8TD10 442 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 LRRC2Q9BYS8 371 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 FAM135BQ49AJ0 1406 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 GJC1P36383 396 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 ORAI2Q96SN7 254 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 TRMT112Q9UI30 125 aaKnown RBP12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 PIK3R4Q99570 1358 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 RICTORQ6R327 1708 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 TOM1O60784 492 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 SARNPP82979 210 aaKnown RBP12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 RPUSD2Q8IZ73 545 aaKnown RBP12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 BCL2L12Q9HB09 334 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 DEPDC5O75140 1603 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 F13A1P00488 732 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 HDXQ7Z353 690 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 ZNF652Q9Y2D9 606 aa12.14□□□□□ -0.47
PKNOX1-201ENST00000291547 KRBA2Q6ZNG9 492 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 CCDC25Q86WR0 208 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 DBF4Q9UBU7 674 aaPredicted RBP12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 SDSP20132 328 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 ASIC1P78348 528 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 PPP2R3AQ06190 1150 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 PPP1R42Q7Z4L9 355 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 BICD1Q96G01 975 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 ALKQ9UM73 1620 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 VWDEQ8N2E2 1590 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 PDE4BQ07343 736 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 CCDC110Q8TBZ0 833 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 ZBTB43O43298 467 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 ZWINTO95229 277 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 AMOTQ4VCS5 1084 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 IFNKQ9P0W0 207 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 MTRF1LQ9UGC7 380 aaKnown RBP12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 FEZ2Q9UHY8 353 aaPredicted RBP12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 MRVI1Q9Y6F6 885 aa12.13□□□□□ -0.47
PKNOX1-201ENST00000291547 PTPRCP08575 1304 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 EVCP57679 992 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 FAM160A1Q05DH4 1040 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 STMN2Q93045 179 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 SEC62Q99442 399 aaKnown RBP12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 CWC25Q9NXE8 425 aaPredicted RBP12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 ERMNQ8TAM6 284 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 FLT4P35916 1363 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 EEF2P13639 858 aaKnown RBP12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 PCK1P35558 622 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 WTAPQ15007 396 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 INTS8Q75QN2 995 aaKnown RBP12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 USP37Q86T82 979 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 SECISBP2LQ93073 1101 aaKnown RBP12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 PPP1R12CQ9BZL4 782 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 TMEM110-MUSTN1A8MSY1 372 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 ZSCAN20P17040 1043 aaPredicted RBP12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 STX17P56962 302 aa12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 LUC7L2Q9Y383 392 aaKnown RBP12.12□□□□□ -0.47
PKNOX1-201ENST00000291547 NDUFAB1O14561 156 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 TNNC1P63316 161 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 LDHAL6AQ6ZMR3 332 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 DHX58Q96C10 678 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 STX8Q9UNK0 236 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 KIF3CO14782 793 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 SPTLC2O15270 562 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 RFC1P35251 1148 aaPredicted RBP12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 IRX5P78411 483 aaPredicted RBP12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 UBAP1LF5GYI3 381 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 VIMP08670 466 aaKnown RBP12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 EIF4A2Q14240 407 aaKnown RBP12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 CHRNA2Q15822 529 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 B4GALNT4Q76KP1 1039 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 SLF2Q8IX21 1173 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 UTP14AQ9BVJ6 771 aaKnown RBP12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 GEMIN8Q9NWZ8 242 aaKnown RBP12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 RTL1A6NKG5 1358 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 KIF1CO43896 1103 aaKnown RBP12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 ADAMTS2O95450 1211 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 ALDH3A1P30838 453 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 SLC20A2Q08357 652 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 TRIM7Q9C029 511 aa12.11□□□□□ -0.47
PKNOX1-201ENST00000291547 LMTK3Q96Q04 1460 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 PREX1Q8TCU6 1659 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 ATP6V1AP38606 617 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 CALCOCO2Q13137 446 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 ERO1AQ96HE7 468 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 IFT74Q96LB3 600 aa12.1□□□□□ -0.47
PKNOX1-201ENST00000291547 ATP6V0A2Q9Y487 856 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms