RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 GNL3LQ9NVN8 582 aaKnown RBP13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 LRP2BPQ9P2M1 347 aa13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 DENND2AQ9ULE3 1009 aa13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 MAST3O60307 1309 aa13.74□□□□□ -0.21
CHRNB3-201ENST00000289957 KIAA2012Q0VF49 1180 aa13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 COL9A3Q14050 684 aaPredicted RBP13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 GRPEL1Q9HAV7 217 aa13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 ANO2Q9NQ90 1003 aa13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 RAI14Q9P0K7 980 aa13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 PCDHAC2Q9Y5I4 1007 aa13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 ADAMTSL1Q8N6G6 1762 aa13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 FOXP2O15409 715 aa13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 RNF113AO15541 343 aaKnown RBP13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 CD2BP2O95400 341 aaKnown RBP13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 ADD2P35612 726 aa13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 MECOMQ03112 1051 aa13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 RRAGDQ9NQL2 400 aaPredicted RBP13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 TAF6LQ9Y6J9 622 aa13.73□□□□□ -0.21
CHRNB3-201ENST00000289957 ZNF646O15015 1829 aaPredicted RBP13.72□□□□□ -0.21
CHRNB3-201ENST00000289957 MFSD14BQ5SR56 506 aa13.72□□□□□ -0.21
CHRNB3-201ENST00000289957 ZMYM1Q5SVZ6 1142 aa13.72□□□□□ -0.21
CHRNB3-201ENST00000289957 COA1Q9GZY4 146 aa13.72□□□□□ -0.21
CHRNB3-201ENST00000289957 RAD17O75943 681 aa13.71□□□□□ -0.21
CHRNB3-201ENST00000289957 CLCN1P35523 988 aa13.71□□□□□ -0.21
CHRNB3-201ENST00000289957 RTKN2Q8IZC4 609 aa13.71□□□□□ -0.21
CHRNB3-201ENST00000289957 LARGE2Q8N3Y3 721 aa13.71□□□□□ -0.21
CHRNB3-201ENST00000289957 PSMD1Q99460 953 aa13.71□□□□□ -0.21
CHRNB3-201ENST00000289957 LSG1Q9H089 658 aaKnown RBP13.71□□□□□ -0.21
CHRNB3-201ENST00000289957 DYNLL1P63167 89 aaKnown RBP13.71□□□□□ -0.21
CHRNB3-201ENST00000289957 TTLL5Q6EMB2 1281 aa13.71□□□□□ -0.21
CHRNB3-201ENST00000289957 NSUN4Q96CB9 384 aaKnown RBP13.71□□□□□ -0.21
CHRNB3-201ENST00000289957 USP26Q9BXU7 913 aa13.71□□□□□ -0.21
CHRNB3-201ENST00000289957 TAOK3Q9H2K8 898 aa13.71□□□□□ -0.21
CHRNB3-201ENST00000289957 PALD1Q9ULE6 856 aa13.71□□□□□ -0.21
CHRNB3-201ENST00000289957 G3V3G9 751 aa13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 GOLGA6L22H0YM25 854 aa13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 SMIM22K7EJ46 135 aa13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 DCAF8Q5TAQ9 597 aa13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 CASC1Q6TDU7 716 aa13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 EYA3Q99504 573 aa13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 CCDC88AQ3V6T2 1871 aa13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 PRKAB2O43741 272 aa13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 IARSP41252 1262 aaKnown RBP13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 SCNN1DP51172 638 aa13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 NUCB2P80303 420 aa13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 ARMT1Q9H993 441 aa13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 ARFGEF1Q9Y6D6 1849 aa13.7□□□□□ -0.22
CHRNB3-201ENST00000289957 SHTN1A0MZ66 631 aa13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 SEMA3EO15041 775 aa13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 HSP90AA1P07900 732 aaKnown RBP13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 CYP7A1P22680 504 aa13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 EVX2Q03828 476 aa13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 TTF1Q15361 905 aaPredicted RBP13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 ARHGAP27Q6ZUM4 889 aa13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 LCORLQ8N3X6 602 aa13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 MAP3K12Q12852 859 aa13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 KLHL40Q2TBA0 621 aa13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 MCMDC2Q4G0Z9 681 aa13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 PANK2Q9BZ23 570 aa13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 GZF1Q9H116 711 aaPredicted RBP13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 CWC22Q9HCG8 908 aaKnown RBP13.69□□□□□ -0.22
CHRNB3-201ENST00000289957 GPAA1O43292 621 aa13.68□□□□□ -0.22
CHRNB3-201ENST00000289957 MBD4O95243 580 aa13.68□□□□□ -0.22
CHRNB3-201ENST00000289957 DACT2Q5SW24 774 aa13.68□□□□□ -0.22
CHRNB3-201ENST00000289957 KIAA0825Q8IV33 1275 aa13.68□□□□□ -0.22
CHRNB3-201ENST00000289957 APPBP2Q92624 585 aa13.68□□□□□ -0.22
CHRNB3-201ENST00000289957 PSMD14O00487 310 aa13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 REC8O95072 547 aa13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 LDHBP07195 334 aaKnown RBP13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 IL17RAQ96F46 866 aa13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 AATFQ9NY61 560 aaKnown RBP eCLIP13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 CCDC171Q6TFL3 1326 aa13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 FAM205AQ6ZU69 1335 aa13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 SLC4A8Q2Y0W8 1093 aa13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 NAA16Q6N069 864 aaPredicted RBP13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 PODNQ7Z5L7 613 aa13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 DZIP1Q86YF9 867 aaKnown RBP13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 RASEFQ8IZ41 740 aa13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 WDR66Q8TBY9 1149 aa13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 SDR42E1Q8WUS8 393 aa13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 PDS5AQ29RF7 1337 aaKnown RBP13.67□□□□□ -0.22
CHRNB3-201ENST00000289957 MYH2Q9UKX2 1941 aa13.66□□□□□ -0.22
CHRNB3-201ENST00000289957 BAG4O95429 457 aaKnown RBP13.66□□□□□ -0.22
CHRNB3-201ENST00000289957 UBE3CQ15386 1083 aa13.66□□□□□ -0.22
CHRNB3-201ENST00000289957 RFX7Q2KHR2 1363 aa13.66□□□□□ -0.22
CHRNB3-201ENST00000289957 SALL1Q9NSC2 1324 aa13.66□□□□□ -0.22
CHRNB3-201ENST00000289957 HSPD1P10809 573 aaKnown RBP13.66□□□□□ -0.22
CHRNB3-201ENST00000289957 CXCL9Q07325 125 aa13.66□□□□□ -0.22
CHRNB3-201ENST00000289957 SUPT20HQ8NEM7 779 aa13.66□□□□□ -0.22
CHRNB3-201ENST00000289957 NKX2-3Q8TAU0 364 aa13.66□□□□□ -0.22
CHRNB3-201ENST00000289957 RIOK1Q9BRS2 568 aaKnown RBP13.66□□□□□ -0.22
CHRNB3-201ENST00000289957 EPB41L4AQ9HCS5 686 aaPredicted RBP13.66□□□□□ -0.22
CHRNB3-201ENST00000289957 HELLSQ9NRZ9 838 aa13.66□□□□□ -0.22
CHRNB3-201ENST00000289957 RAD50Q92878 1312 aa13.65□□□□□ -0.22
CHRNB3-201ENST00000289957 USP17L3A6NCW0 530 aa13.65□□□□□ -0.22
CHRNB3-201ENST00000289957 USP17L4A6NCW7 530 aa13.65□□□□□ -0.22
CHRNB3-201ENST00000289957 HIP1O00291 1037 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms