RNA–Protein interactions for RNA: ENST00000289495.7

PPP1R9A-201, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-201ENST00000289495 PDIA3P30101 505 aaKnown RBP5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 SLC9C2Q5TAH2 1124 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 SYNE3Q6ZMZ3 975 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 NFXL1Q6ZNB6 911 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 CCAR1Q8IX12 1150 aaKnown RBP5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 CARMIL3Q8ND23 1372 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 RIC1Q4ADV7 1423 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 TOGARAM1Q9Y4F4 1720 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 PPFIA3O75145 1194 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 ZNF165P49910 485 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 TERF1P54274 439 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 EXOSC10Q01780 885 aaKnown RBP5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 TRIM29Q14134 588 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 HSP90AA2PQ14568 343 aaPredicted RBP5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 PUM3Q15397 648 aaKnown RBP5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 FSIP1Q8NA03 581 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 TTLL11Q8NHH1 800 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 FUCA2Q9BTY2 467 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 TOMM22Q9NS69 142 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 SHANK3Q9BYB0 1731 aa5.66□□□□□ -1.5
PPP1R9A-201ENST00000289495 UQCRHLA0A096LP55 91 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 FGAP02671 866 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 UQCRHP07919 91 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 CYP19A1P11511 503 aaPredicted RBP5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 IL6STP40189 918 aaPredicted RBP5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 MAP3K12Q12852 859 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 SCARF1Q14162 830 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 HLFQ16534 295 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 STX1AQ16623 288 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 GLIPR1L2Q4G1C9 344 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 PI16Q6UXB8 463 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 AGXT2Q9BYV1 514 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 TTC12Q9H892 705 aaPredicted RBP5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 MRVI1Q9Y6F6 885 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 NHSL1Q5SYE7 1610 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 NR1I2O75469 434 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 IGHMBP2P38935 993 aaKnown RBP5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 PIP4K2BP78356 416 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 LUZP1Q86V48 1076 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 RAB11FIP4Q86YS3 637 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 SDF4Q9BRK5 362 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 NAPBQ9H115 298 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 DNAJC25Q9H1X3 360 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 MROH5Q6ZUA9 1318 aa5.65□□□□□ -1.5
PPP1R9A-201ENST00000289495 ERVV-1B6SEH8 477 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 PDE8BO95263 885 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 ADD2P35612 726 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 MCAMP43121 646 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 BRAPQ7Z569 592 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 CEP57L1Q8IYX8 460 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 HS6ST3Q8IZP7 471 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 PIBF1Q8WXW3 757 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 LPIN2Q92539 896 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 MRPS27Q92552 414 aaKnown RBP5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 PGBD1Q96JS3 809 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 ZNF830Q96NB3 372 aaPredicted RBP5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 USP28Q96RU2 1077 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 CDCA7Q9BWT1 371 aaPredicted RBP5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 NAT10Q9H0A0 1025 aaKnown RBP5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 PUS7LQ9H0K6 701 aaKnown RBP5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 CBX8Q9HC52 389 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 ANO10Q9NW15 660 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 BCL9O00512 1426 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 CHRM1P11229 460 aaPredicted RBP5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 METAP2P50579 478 aaKnown RBP eCLIP5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 TPM4P67936 248 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 FAM160A1Q05DH4 1040 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 SART3Q15020 963 aaKnown RBP5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 ASTLQ6HA08 431 aaPredicted RBP5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 MB21D2Q8IYB1 491 aaPredicted RBP5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 SYNE4Q8N205 404 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 KCNG4Q8TDN1 519 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 NACAP1Q9BZK3 213 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 CCDC87Q9NVE4 849 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 RIPOR2Q9Y4F9 1068 aa5.65□□□□□ -1.51
PPP1R9A-201ENST00000289495 COL14A1Q05707 1796 aaKnown RBP5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 LAMA4Q16363 1823 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 WDR19Q8NEZ3 1342 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 ZNF532Q9HCE3 1301 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 A0A0G2JLW4 131 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 RRP9O43818 475 aaKnown RBP5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 POTEJP0CG39 1038 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 PDE6AP16499 860 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 PHKA1P46020 1223 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 UBE3CQ15386 1083 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 DDB1Q16531 1140 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 CCDC152Q4G0S7 254 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 CCDC102BQ68D86 513 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 HELBQ8NG08 1087 aaPredicted RBP5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 UTP14AQ9BVJ6 771 aaKnown RBP5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 RCOR1Q9UKL0 485 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 ANGEL1Q9UNK9 670 aaKnown RBP5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 ZNF652Q9Y2D9 606 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 LRP6O75581 1613 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 ERICH2A1L162 156 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 CCDC69A6NI79 296 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 GOLGA8AA7E2F4 631 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 CTDNEP1O95476 244 aa5.64□□□□□ -1.51
PPP1R9A-201ENST00000289495 TIE1P35590 1138 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms