RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 TMEM87AQ8NBN3 555 aa12.04□□□□□ -0.48
C9orf43-201ENST00000288462 NCOA7Q8NI08 942 aa12.04□□□□□ -0.48
C9orf43-201ENST00000288462 LLPHQ9BRT6 129 aaKnown RBP12.04□□□□□ -0.48
C9orf43-201ENST00000288462 IQSEC3Q9UPP2 1182 aaPredicted RBP12.04□□□□□ -0.48
C9orf43-201ENST00000288462 DDX49Q9Y6V7 483 aaKnown RBP12.04□□□□□ -0.48
C9orf43-201ENST00000288462 PATL2C9JE40 543 aaKnown RBP12.03□□□□□ -0.48
C9orf43-201ENST00000288462 PRPF40AO75400 957 aaKnown RBP12.03□□□□□ -0.48
C9orf43-201ENST00000288462 GNAT2P19087 354 aa12.03□□□□□ -0.48
C9orf43-201ENST00000288462 FGD1P98174 961 aa12.03□□□□□ -0.48
C9orf43-201ENST00000288462 DDR1Q08345 913 aa12.03□□□□□ -0.48
C9orf43-201ENST00000288462 APOBRQ0VD83 1088 aa12.03□□□□□ -0.48
C9orf43-201ENST00000288462 SCRN1Q12765 414 aa12.03□□□□□ -0.48
C9orf43-201ENST00000288462 SMARCC2Q8TAQ2 1214 aa12.03□□□□□ -0.48
C9orf43-201ENST00000288462 ZNF274Q96GC6 653 aaPredicted RBP12.03□□□□□ -0.48
C9orf43-201ENST00000288462 ARMT1Q9H993 441 aa12.03□□□□□ -0.48
C9orf43-201ENST00000288462 LRP2BPQ9P2M1 347 aa12.03□□□□□ -0.48
C9orf43-201ENST00000288462 LAMB1P07942 1786 aa12.03□□□□□ -0.48
C9orf43-201ENST00000288462 SERPINB2P05120 415 aa12.02□□□□□ -0.48
C9orf43-201ENST00000288462 MCM5P33992 734 aa12.02□□□□□ -0.48
C9orf43-201ENST00000288462 ANTXR2P58335 489 aa12.02□□□□□ -0.48
C9orf43-201ENST00000288462 ST5P78524 1137 aa12.02□□□□□ -0.48
C9orf43-201ENST00000288462 VPS37DQ86XT2 251 aa12.02□□□□□ -0.48
C9orf43-201ENST00000288462 LCORLQ8N3X6 602 aa12.02□□□□□ -0.48
C9orf43-201ENST00000288462 ATP6V1DQ9Y5K8 247 aa12.02□□□□□ -0.48
C9orf43-201ENST00000288462 GSG1L2A8MUP6 293 aa12.02□□□□□ -0.49
C9orf43-201ENST00000288462 POLRMTO00411 1230 aaKnown RBP12.02□□□□□ -0.49
C9orf43-201ENST00000288462 PRC1O43663 620 aa12.02□□□□□ -0.49
C9orf43-201ENST00000288462 ZNF827Q17R98 1081 aa12.02□□□□□ -0.49
C9orf43-201ENST00000288462 RALYLQ86SE5 291 aaKnown RBP12.02□□□□□ -0.49
C9orf43-201ENST00000288462 IFNL3Q8IZI9 196 aa12.02□□□□□ -0.49
C9orf43-201ENST00000288462 AKT1S1Q96B36 256 aa12.02□□□□□ -0.49
C9orf43-201ENST00000288462 SALL1Q9NSC2 1324 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 COL11A2P13942 1736 aaPredicted RBP12.01□□□□□ -0.49
C9orf43-201ENST00000288462 JAK2O60674 1132 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 DTNBO60941 627 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 APPP05067 770 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 CYP7A1P22680 504 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 HIBADHP31937 336 aaKnown RBP12.01□□□□□ -0.49
C9orf43-201ENST00000288462 LARP1BQ659C4 914 aaKnown RBP12.01□□□□□ -0.49
C9orf43-201ENST00000288462 CHST3Q7LGC8 479 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 ADGRA1Q86SQ6 560 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 NSUN7Q8NE18 718 aaKnown RBP12.01□□□□□ -0.49
C9orf43-201ENST00000288462 GPT2Q8TD30 523 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 ISY1Q9ULR0 285 aaKnown RBP12.01□□□□□ -0.49
C9orf43-201ENST00000288462 XDHP47989 1333 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 MBD3O95983 291 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 PDIA3P30101 505 aaKnown RBP12.01□□□□□ -0.49
C9orf43-201ENST00000288462 TMED8Q6PL24 325 aaPredicted RBP12.01□□□□□ -0.49
C9orf43-201ENST00000288462 C15orf52Q6ZUT6 534 aaKnown RBP12.01□□□□□ -0.49
C9orf43-201ENST00000288462 CDC37L1Q7L3B6 337 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 RPGRQ92834 1020 aaKnown RBP12.01□□□□□ -0.49
C9orf43-201ENST00000288462 NAPBQ9H115 298 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 RAI14Q9P0K7 980 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 ABCF2Q9UG63 623 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 LEMD3Q9Y2U8 911 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 ECM29Q5VYK3 1845 aa12.01□□□□□ -0.49
C9orf43-201ENST00000288462 NEDD4P46934 1319 aa12□□□□□ -0.49
C9orf43-201ENST00000288462 QSER1Q2KHR3 1735 aa12□□□□□ -0.49
C9orf43-201ENST00000288462 KLRG2A4D1S0 409 aaPredicted RBP12□□□□□ -0.49
C9orf43-201ENST00000288462 VPS37CA5D8V6 355 aaPredicted RBP12□□□□□ -0.49
C9orf43-201ENST00000288462 CTDNEP1O95476 244 aa12□□□□□ -0.49
C9orf43-201ENST00000288462 HOXA10P31260 410 aaPredicted RBP12□□□□□ -0.49
C9orf43-201ENST00000288462 TRDNQ13061 729 aa12□□□□□ -0.49
C9orf43-201ENST00000288462 MIGA1Q8NAN2 632 aa12□□□□□ -0.49
C9orf43-201ENST00000288462 ZNF384Q8TF68 577 aa12□□□□□ -0.49
C9orf43-201ENST00000288462 CHMP4CQ96CF2 233 aa12□□□□□ -0.49
C9orf43-201ENST00000288462 RIOK1Q9BRS2 568 aaKnown RBP12□□□□□ -0.49
C9orf43-201ENST00000288462 TFCP2L1Q9NZI6 479 aa12□□□□□ -0.49
C9orf43-201ENST00000288462 BAZ2AQ9UIF9 1905 aaKnown RBP12□□□□□ -0.49
C9orf43-201ENST00000288462 PRKAB2O43741 272 aa11.99□□□□□ -0.49
C9orf43-201ENST00000288462 HMGN5P82970 282 aaKnown RBP11.99□□□□□ -0.49
C9orf43-201ENST00000288462 L1TD1Q5T7N2 865 aaKnown RBP11.99□□□□□ -0.49
C9orf43-201ENST00000288462 SLC51AQ86UW1 340 aa11.99□□□□□ -0.49
C9orf43-201ENST00000288462 TXNRD3Q86VQ6 643 aa11.99□□□□□ -0.49
C9orf43-201ENST00000288462 NACAP1Q9BZK3 213 aa11.99□□□□□ -0.49
C9orf43-201ENST00000288462 GPHNQ9NQX3 736 aaPredicted RBP11.99□□□□□ -0.49
C9orf43-201ENST00000288462 SLC4A4Q9Y6R1 1079 aa11.99□□□□□ -0.49
C9orf43-201ENST00000288462 MAGEB6P1A0A0J9YX57 407 aa11.99□□□□□ -0.49
C9orf43-201ENST00000288462 PTPDC1A2A3K4 754 aa11.99□□□□□ -0.49
C9orf43-201ENST00000288462 GOLGA6L3A6NEY3 463 aa11.99□□□□□ -0.49
C9orf43-201ENST00000288462 IGSF3O75054 1194 aa11.99□□□□□ -0.49
C9orf43-201ENST00000288462 CYB5R4Q7L1T6 521 aa11.99□□□□□ -0.49
C9orf43-201ENST00000288462 NKX2-3Q8TAU0 364 aa11.99□□□□□ -0.49
C9orf43-201ENST00000288462 RBM17Q96I25 401 aaKnown RBP11.99□□□□□ -0.49
C9orf43-201ENST00000288462 CNPY2Q9Y2B0 182 aa11.99□□□□□ -0.49
C9orf43-201ENST00000288462 SH2B2O14492 632 aaPredicted RBP11.98□□□□□ -0.49
C9orf43-201ENST00000288462 APBA3O96018 575 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 NAA16Q6N069 864 aaPredicted RBP11.98□□□□□ -0.49
C9orf43-201ENST00000288462 STAG1Q8WVM7 1258 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 NSUN4Q96CB9 384 aaKnown RBP11.98□□□□□ -0.49
C9orf43-201ENST00000288462 BRPF3Q9ULD4 1205 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 HPS5Q9UPZ3 1129 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 DLEC1Q9Y238 1755 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 KLF18A0A0U1RQI7 1052 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 RXRBP28702 533 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 TDO2P48775 406 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 ZNF445P59923 1031 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 FOXD4L6Q3SYB3 417 aaPredicted RBP11.98□□□□□ -0.49
C9orf43-201ENST00000288462 AKNAD1Q5T1N1 836 aa11.98□□□□□ -0.49
C9orf43-201ENST00000288462 CAVIN1Q6NZI2 390 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms