RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 LPIN2Q92539 896 aa11.41□□□□□ -0.58
HMGN1-201ENST00000288344 ASTN2O75129 1339 aaPredicted RBP11.41□□□□□ -0.58
HMGN1-201ENST00000288344 USP17L8P0C7I0 530 aa11.4□□□□□ -0.58
HMGN1-201ENST00000288344 MS4A1P11836 297 aa11.4□□□□□ -0.58
HMGN1-201ENST00000288344 PLCG2P16885 1265 aa11.4□□□□□ -0.58
HMGN1-201ENST00000288344 LMOD1P29536 600 aaPredicted RBP11.4□□□□□ -0.58
HMGN1-201ENST00000288344 TIMM10P62072 90 aa11.4□□□□□ -0.58
HMGN1-201ENST00000288344 ITPRIPQ8IWB1 547 aa11.4□□□□□ -0.58
HMGN1-201ENST00000288344 FTSJ3Q8IY81 847 aaKnown RBP11.4□□□□□ -0.58
HMGN1-201ENST00000288344 SIL1Q9H173 461 aa11.4□□□□□ -0.58
HMGN1-201ENST00000288344 C1orf115Q9H7X2 142 aa11.4□□□□□ -0.58
HMGN1-201ENST00000288344 COG6Q9Y2V7 657 aa11.4□□□□□ -0.58
HMGN1-201ENST00000288344 KCNJ4P48050 445 aa11.39□□□□□ -0.59
HMGN1-201ENST00000288344 HTRA3P83110 453 aa11.39□□□□□ -0.59
HMGN1-201ENST00000288344 TFCP2Q12800 502 aa11.39□□□□□ -0.59
HMGN1-201ENST00000288344 TBC1D10BQ4KMP7 808 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-201ENST00000288344 EAPPQ56P03 285 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-201ENST00000288344 DLK2Q6UY11 383 aa11.39□□□□□ -0.59
HMGN1-201ENST00000288344 ZNF804AQ7Z570 1209 aa11.39□□□□□ -0.59
HMGN1-201ENST00000288344 MRIQ9BWK5 157 aa11.39□□□□□ -0.59
HMGN1-201ENST00000288344 MYOZ2Q9NPC6 264 aa11.39□□□□□ -0.59
HMGN1-201ENST00000288344 GPR108Q9NPR9 543 aa11.39□□□□□ -0.59
HMGN1-201ENST00000288344 WDR70Q9NW82 654 aa11.39□□□□□ -0.59
HMGN1-201ENST00000288344 CEP126Q9P2H0 1117 aa11.39□□□□□ -0.59
HMGN1-201ENST00000288344 AOX1Q06278 1338 aa11.39□□□□□ -0.59
HMGN1-201ENST00000288344 MYO3BQ8WXR4 1341 aa11.39□□□□□ -0.59
HMGN1-201ENST00000288344 COL1A1P02452 1464 aaPredicted RBP11.39□□□□□ -0.59
HMGN1-201ENST00000288344 WNT10BO00744 389 aa11.38□□□□□ -0.59
HMGN1-201ENST00000288344 ADORA1P30542 326 aa11.38□□□□□ -0.59
HMGN1-201ENST00000288344 NBPF9Q3BBW0 867 aa11.38□□□□□ -0.59
HMGN1-201ENST00000288344 RPAP2Q8IXW5 612 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-201ENST00000288344 DDX19BQ9UMR2 479 aa11.38□□□□□ -0.59
HMGN1-201ENST00000288344 PCDHAC2Q9Y5I4 1007 aa11.38□□□□□ -0.59
HMGN1-201ENST00000288344 G3V3G9 751 aa11.37□□□□□ -0.59
HMGN1-201ENST00000288344 TRAF5O00463 557 aa11.37□□□□□ -0.59
HMGN1-201ENST00000288344 SCARF1Q14162 830 aa11.37□□□□□ -0.59
HMGN1-201ENST00000288344 ATP2B3Q16720 1220 aa11.37□□□□□ -0.59
HMGN1-201ENST00000288344 ARAP2Q8WZ64 1704 aa11.37□□□□□ -0.59
HMGN1-201ENST00000288344 TRPM7Q96QT4 1865 aa11.37□□□□□ -0.59
HMGN1-201ENST00000288344 A0A1B0GUL7 405 aa11.36□□□□□ -0.59
HMGN1-201ENST00000288344 IFIT1P09914 478 aaKnown RBP11.36□□□□□ -0.59
HMGN1-201ENST00000288344 PHKA1P46020 1223 aa11.36□□□□□ -0.59
HMGN1-201ENST00000288344 KIF4BQ2VIQ3 1234 aa11.36□□□□□ -0.59
HMGN1-201ENST00000288344 CCDC102BQ68D86 513 aa11.36□□□□□ -0.59
HMGN1-201ENST00000288344 CDC37L1Q7L3B6 337 aa11.36□□□□□ -0.59
HMGN1-201ENST00000288344 KIAA0825Q8IV33 1275 aa11.36□□□□□ -0.59
HMGN1-201ENST00000288344 XAGE2Q96GT9 111 aa11.36□□□□□ -0.59
HMGN1-201ENST00000288344 PRMT6Q96LA8 375 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-201ENST00000288344 GLIS2Q9BZE0 524 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-201ENST00000288344 COLQQ9Y215 455 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-201ENST00000288344 PITPNM2Q9BZ72 1349 aa11.36□□□□□ -0.59
HMGN1-201ENST00000288344 AKAP11Q9UKA4 1901 aa11.36□□□□□ -0.59
HMGN1-201ENST00000288344 POTEFA5A3E0 1075 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 SLC5A1P13866 664 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 CAVIN4Q5BKX8 364 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
HMGN1-201ENST00000288344 JMYQ8N9B5 988 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 IQSEC3Q9UPP2 1182 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-201ENST00000288344 JAG2Q9Y219 1238 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 SUGT1Q9Y2Z0 365 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 PDS5AQ29RF7 1337 aaKnown RBP11.35□□□□□ -0.59
HMGN1-201ENST00000288344 SALL1Q9NSC2 1324 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 TMEM88BA6NKF7 163 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 POTEB2H3BUK9 544 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 SEMA3EO15041 775 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 SURF6O75683 361 aaKnown RBP11.35□□□□□ -0.59
HMGN1-201ENST00000288344 RRP1P56182 461 aaKnown RBP11.35□□□□□ -0.59
HMGN1-201ENST00000288344 IRX5P78411 483 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-201ENST00000288344 HDLBPQ00341 1268 aaKnown RBP11.35□□□□□ -0.59
HMGN1-201ENST00000288344 G3BP1Q13283 466 aaKnown RBP eCLIP11.35□□□□□ -0.59
HMGN1-201ENST00000288344 MFSD14BQ5SR56 506 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 USP48Q86UV5 1035 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 ZNF384Q8TF68 577 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 EAF2Q96CJ1 260 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-201ENST00000288344 ZNF512BQ96KM6 892 aaPredicted RBP11.35□□□□□ -0.59
HMGN1-201ENST00000288344 OCEL1Q9H607 264 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 SERPINA10Q9UK55 444 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 AKAP2Q9Y2D5 859 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 PCDHB15Q9Y5E8 787 aa11.35□□□□□ -0.59
HMGN1-201ENST00000288344 RASSF10A6NK89 507 aa11.34□□□□□ -0.59
HMGN1-201ENST00000288344 ARID4AP29374 1257 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-201ENST00000288344 RASGRF1Q13972 1273 aa11.34□□□□□ -0.59
HMGN1-201ENST00000288344 TNNI3KQ59H18 835 aa11.34□□□□□ -0.59
HMGN1-201ENST00000288344 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
HMGN1-201ENST00000288344 APOBEC3HQ6NTF7 200 aaKnown RBP11.34□□□□□ -0.59
HMGN1-201ENST00000288344 OGFOD1Q8N543 542 aa11.34□□□□□ -0.59
HMGN1-201ENST00000288344 TBC1D22AQ8WUA7 517 aa11.34□□□□□ -0.59
HMGN1-201ENST00000288344 KLRG1Q96E93 195 aa11.34□□□□□ -0.59
HMGN1-201ENST00000288344 YTHDC1Q96MU7 727 aaKnown RBP11.34□□□□□ -0.59
HMGN1-201ENST00000288344 GGA3Q9NZ52 723 aa11.34□□□□□ -0.59
HMGN1-201ENST00000288344 FPGT-TNNI3KV9GXZ4 949 aa11.34□□□□□ -0.59
HMGN1-201ENST00000288344 ADM5C9JUS6 153 aa11.33□□□□□ -0.6
HMGN1-201ENST00000288344 CFAP100Q494V2 611 aa11.33□□□□□ -0.6
HMGN1-201ENST00000288344 SAPCD2Q86UD0 394 aa11.33□□□□□ -0.6
HMGN1-201ENST00000288344 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-201ENST00000288344 FAM163AQ96GL9 167 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-201ENST00000288344 HMG20BQ9P0W2 317 aa11.33□□□□□ -0.6
HMGN1-201ENST00000288344 DBNLQ9UJU6 430 aaKnown RBP11.33□□□□□ -0.6
HMGN1-201ENST00000288344 HHIPL2Q6UWX4 724 aa11.32□□□□□ -0.6
HMGN1-201ENST00000288344 KRT26Q7Z3Y9 468 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms