RNA–Protein interactions for RNA: ENST00000288139.9

CACNA1D-201, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNA1D, Length 9,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-201ENST00000288139 USP48Q86UV5 1035 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 TESK2Q96S53 571 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 NUF2Q9BZD4 464 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 TRIM7Q9C029 511 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 ZHX1Q9UKY1 873 aaPredicted RBP9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 SPAG17Q6Q759 2223 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 HMOX1P09601 288 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 INPP5BP32019 993 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 KIAA0753Q2KHM9 967 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 SULT6B1Q6IMI4 303 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 PHLPP2Q6ZVD8 1323 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 C20orf194Q5TEA3 1177 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 CATIPQ7Z7H3 387 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 PLCH2O75038 1416 aa9.41□□□□□ -0.9
CACNA1D-201ENST00000288139 SPTLC2O15270 562 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 LPXNO60711 386 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 APLFQ8IW19 511 aaPredicted RBP9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 NEK1Q96PY6 1258 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 HAUS8Q9BT25 410 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 ZNF652Q9Y2D9 606 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 HVCN1Q96D96 273 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 CSRNP2Q9H175 543 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 LARSQ9P2J5 1176 aaKnown RBP9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 BRD1O95696 1058 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 OPTNQ96CV9 577 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 CALML4Q96GE6 196 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 JADE2Q9NQC1 790 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 RAI14Q9P0K7 980 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 CCDC194A0A1B0GVG4 234 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 PER1O15534 1290 aaPredicted RBP9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 CCDC40Q4G0X9 1142 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 SERPINA10Q9UK55 444 aa9.4□□□□□ -0.9
CACNA1D-201ENST00000288139 IARSP41252 1262 aaKnown RBP9.4□□□□□ -0.91
CACNA1D-201ENST00000288139 NLRP6P59044 892 aa9.4□□□□□ -0.91
CACNA1D-201ENST00000288139 RBBP5Q15291 538 aaKnown RBP9.4□□□□□ -0.91
CACNA1D-201ENST00000288139 THEMISQ8N1K5 641 aaPredicted RBP9.4□□□□□ -0.91
CACNA1D-201ENST00000288139 PRAM1Q96QH2 718 aa9.4□□□□□ -0.91
CACNA1D-201ENST00000288139 FANCAO15360 1455 aa9.4□□□□□ -0.91
CACNA1D-201ENST00000288139 ZNF75DP51815 510 aa9.4□□□□□ -0.91
CACNA1D-201ENST00000288139 PPP2R3AQ06190 1150 aa9.4□□□□□ -0.91
CACNA1D-201ENST00000288139 PDCD2Q16342 344 aaPredicted RBP9.4□□□□□ -0.91
CACNA1D-201ENST00000288139 SRGAP1Q7Z6B7 1085 aa9.4□□□□□ -0.91
CACNA1D-201ENST00000288139 CDK19Q9BWU1 502 aa9.4□□□□□ -0.91
CACNA1D-201ENST00000288139 FLT4P35916 1363 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 ZNF530Q6P9A1 599 aaPredicted RBP9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 SEPT14Q6ZU15 432 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 IQUBQ8NA54 791 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 WHAMMQ8TF30 809 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 TBC1D5Q92609 795 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 ATP2A3Q93084 1043 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 A0A1W2PQ27 194 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 A0A1W2PQ64 194 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 A0A1W2PQD8 194 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 LMNB2Q03252 620 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 NUTM2FA1L443 756 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 TATP17735 454 aaPredicted RBP9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 SSRP1Q08945 709 aaKnown RBP9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 PAK2Q13177 524 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 MCM6Q14566 821 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 NUTM2GQ5VZR2 741 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 NAPGQ99747 312 aaPredicted RBP9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 EDC4Q6P2E9 1401 aaKnown RBP9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 MBD5Q9P267 1494 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 CFAP157Q5JU67 520 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 CCDC26Q8TAB7 109 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 CABP2Q9NPB3 220 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 MYL1P05976 194 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 ATP2B1P20020 1258 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 CRACR2BQ8N4Y2 399 aaPredicted RBP9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 CCDC114Q96M63 670 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 ATP11AP98196 1134 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 GEN1Q17RS7 908 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 STMN2Q93045 179 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 NAPBQ9H115 298 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 UBA7P41226 1012 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 USP5P45974 858 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 RNF168Q8IYW5 571 aaPredicted RBP9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.39□□□□□ -0.913e-6■■■■■ 48.1
CACNA1D-201ENST00000288139 CDC42BPBQ9Y5S2 1711 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 HLTFQ14527 1009 aaKnown RBP eCLIP9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 PLCB4Q15147 1175 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 CCDC184Q52MB2 194 aa9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 ZNF622Q969S3 477 aaKnown RBP eCLIP9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 BAG1Q99933 345 aaPredicted RBP9.39□□□□□ -0.91
CACNA1D-201ENST00000288139 RNASELQ05823 741 aaKnown RBP9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 CYP26C1Q6V0L0 522 aa9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 PCDHB15Q9Y5E8 787 aa9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 PREX2Q70Z35 1606 aa9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 CCHCR1Q8TD31 782 aa9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 TRPM1Q7Z4N2 1603 aa9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 CASQ2O14958 399 aaPredicted RBP9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 ATP8B2P98198 1209 aa9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 PANK2Q9BZ23 570 aa9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 CKAP2LQ8IYA6 745 aa9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 THEGQ9P2T0 379 aa9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 RSPH14Q9UHP6 348 aa9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 AKR1B15C9JRZ8 316 aaPredicted RBP9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 PLEKHM2Q8IWE5 1019 aa9.38□□□□□ -0.91
CACNA1D-201ENST00000288139 CFAP36Q96G28 342 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms