RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 PRKG1Q13976 671 aa10.62□□□□□ -0.71
CCDC144B-201ENST00000285176 SART3Q15020 963 aaKnown RBP10.62□□□□□ -0.71
CCDC144B-201ENST00000285176 LCORLQ8N3X6 602 aa10.62□□□□□ -0.71
CCDC144B-201ENST00000285176 CRACR2BQ8N4Y2 399 aaPredicted RBP10.62□□□□□ -0.71
CCDC144B-201ENST00000285176 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.62□□□□□ -0.71
CCDC144B-201ENST00000285176 PRC1O43663 620 aa10.62□□□□□ -0.71
CCDC144B-201ENST00000285176 CSF1RP07333 972 aa10.62□□□□□ -0.71
CCDC144B-201ENST00000285176 DDR1Q08345 913 aa10.62□□□□□ -0.71
CCDC144B-201ENST00000285176 CAVIN1Q6NZI2 390 aaKnown RBP10.62□□□□□ -0.71
CCDC144B-201ENST00000285176 DENND2AQ9ULE3 1009 aa10.62□□□□□ -0.71
CCDC144B-201ENST00000285176 RNF214Q8ND24 703 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 TTF2Q9UNY4 1162 aaKnown RBP10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 USP17L12C9JPN9 530 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 USP17L21D6R901 530 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 CIAO1O76071 339 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 GPSM2P81274 684 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 COL9A3Q14050 684 aaPredicted RBP10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 BICD2Q8TD16 824 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 RGPD1P0DJD0 1748 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 SLIT2O94813 1529 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 JAK2O60674 1132 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 GRAPQ13588 217 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 SLC27A3Q5K4L6 730 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 HOMER1Q86YM7 354 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 GRAPLQ8TC17 118 aaPredicted RBP10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 CCDC34Q96HJ3 373 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 ARID3AQ99856 593 aa10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 BSDC1Q9NW68 430 aaPredicted RBP10.61□□□□□ -0.71
CCDC144B-201ENST00000285176 LARGE1O95461 756 aa10.6□□□□□ -0.71
CCDC144B-201ENST00000285176 HSPA4P34932 840 aa10.6□□□□□ -0.71
CCDC144B-201ENST00000285176 CARMIL3Q8ND23 1372 aa10.6□□□□□ -0.71
CCDC144B-201ENST00000285176 FAM84BQ96KN1 310 aaPredicted RBP10.6□□□□□ -0.71
CCDC144B-201ENST00000285176 UTYO14607 1347 aa10.6□□□□□ -0.71
CCDC144B-201ENST00000285176 CNTNAP4Q9C0A0 1308 aa10.6□□□□□ -0.71
CCDC144B-201ENST00000285176 FAM196BA6NMK8 535 aa10.6□□□□□ -0.71
CCDC144B-201ENST00000285176 ZFYP08048 801 aaPredicted RBP10.6□□□□□ -0.71
CCDC144B-201ENST00000285176 KRT32Q14532 448 aa10.6□□□□□ -0.71
CCDC144B-201ENST00000285176 SLC15A2Q16348 729 aa10.6□□□□□ -0.71
CCDC144B-201ENST00000285176 NCOA7Q8NI08 942 aa10.6□□□□□ -0.71
CCDC144B-201ENST00000285176 ZNF277Q9NRM2 450 aaPredicted RBP10.6□□□□□ -0.71
CCDC144B-201ENST00000285176 CDHR2Q9BYE9 1310 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 BECN2A8MW95 431 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 PDE6BP35913 854 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 TRIM29Q14134 588 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 RUFY3Q7L099 469 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 TEX11Q8IYF3 940 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 FBXO41Q8TF61 875 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 CRNKL1Q9BZJ0 848 aaKnown RBP10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 BAZ2BQ9UIF8 2168 aaKnown RBP10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 CLRN2A0PK11 232 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 E7EWF7 191 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 SMIM22K7EJ46 135 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 TPM4P67936 248 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 AOC3Q16853 763 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 ZNF444Q8N0Y2 327 aaPredicted RBP10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 SLC12A7Q9Y666 1083 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 RC3H1Q5TC82 1133 aaKnown RBP10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 PHKBQ93100 1093 aa10.59□□□□□ -0.71
CCDC144B-201ENST00000285176 XDHP47989 1333 aa10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 BAG3O95817 575 aa10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 UIMC1Q96RL1 719 aa10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 CYP2D6P10635 497 aa10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 UBE4AQ14139 1066 aa10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 ZYXQ15942 572 aaKnown RBP10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 ME3Q16798 604 aa10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 GOLGA8AA7E2F4 631 aa10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 GOLGA6L19H0YKK7 550 aa10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 MCM5P33992 734 aa10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 MECOMQ03112 1051 aa10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 DYNLL2Q96FJ2 89 aa10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 DISP2A7MBM2 1401 aa10.58□□□□□ -0.72
CCDC144B-201ENST00000285176 SLC3A2P08195 630 aaKnown RBP10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 MCM2P49736 904 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 IFNL3Q8IZI9 196 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 SLC26A6Q9BXS9 759 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 TPCN1Q9ULQ1 816 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 LMO7Q8WWI1 1683 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 USP17L8P0C7I0 530 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 ALDH1B1P30837 517 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 MCM4P33991 863 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 ZMYM1Q5SVZ6 1142 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 JDP2Q8WYK2 163 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 MAP4K1Q92918 833 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 KIF2CQ99661 725 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 KCNQ5Q9NR82 932 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 HELLSQ9NRZ9 838 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 GJB4Q9NTQ9 266 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 AOX1Q06278 1338 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 ADD2P35612 726 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 IQCA1Q86XH1 822 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 OGFOD1Q8N543 542 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 SLC44A5Q8NCS7 719 aa10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 ZBTB12Q9Y330 459 aaPredicted RBP10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 TRMT1LQ7Z2T5 733 aaKnown RBP10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 RBM27Q9P2N5 1060 aaKnown RBP10.57□□□□□ -0.72
CCDC144B-201ENST00000285176 COL14A1Q05707 1796 aaKnown RBP10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 METAP2P50579 478 aaKnown RBP eCLIP10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 ANKRD1Q15327 319 aa10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 DHX32Q7L7V1 743 aaKnown RBP10.56□□□□□ -0.72
CCDC144B-201ENST00000285176 ORC3Q9UBD5 711 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms