RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 GJA3Q9Y6H8 435 aa11.15□□□□□ -0.62
PDCD4-201ENST00000280154 ZNF609O15014 1411 aa11.15□□□□□ -0.62
PDCD4-201ENST00000280154 RFX5P48382 616 aaPredicted RBP11.15□□□□□ -0.62
PDCD4-201ENST00000280154 LETM1O95202 739 aaPredicted RBP11.15□□□□□ -0.63
PDCD4-201ENST00000280154 HLFQ16534 295 aa11.15□□□□□ -0.63
PDCD4-201ENST00000280154 ZC3H12AQ5D1E8 599 aaKnown RBP11.15□□□□□ -0.63
PDCD4-201ENST00000280154 CLASRPQ8N2M8 674 aaKnown RBP11.15□□□□□ -0.63
PDCD4-201ENST00000280154 SIRT2Q8IXJ6 389 aa11.14□□□□□ -0.63
PDCD4-201ENST00000280154 RTCBQ9Y3I0 505 aaKnown RBP11.14□□□□□ -0.63
PDCD4-201ENST00000280154 AKAP11Q9UKA4 1901 aa11.14□□□□□ -0.63
PDCD4-201ENST00000280154 TPM2P07951 284 aa11.14□□□□□ -0.63
PDCD4-201ENST00000280154 DZIP3Q86Y13 1208 aaKnown RBP11.14□□□□□ -0.63
PDCD4-201ENST00000280154 SSH3Q8TE77 659 aa11.14□□□□□ -0.63
PDCD4-201ENST00000280154 MAGEC2Q9UBF1 373 aaPredicted RBP11.14□□□□□ -0.63
PDCD4-201ENST00000280154 IPO5O00410 1097 aaKnown RBP11.14□□□□□ -0.63
PDCD4-201ENST00000280154 POLRMTO00411 1230 aaKnown RBP11.14□□□□□ -0.63
PDCD4-201ENST00000280154 ILDR2Q71H61 639 aa11.14□□□□□ -0.63
PDCD4-201ENST00000280154 COL23A1Q86Y22 540 aaPredicted RBP11.14□□□□□ -0.63
PDCD4-201ENST00000280154 ITFG2Q969R8 447 aa11.14□□□□□ -0.63
PDCD4-201ENST00000280154 RBM42Q9BTD8 480 aaKnown RBP11.14□□□□□ -0.63
PDCD4-201ENST00000280154 PAGR1Q9BTK6 254 aa11.14□□□□□ -0.63
PDCD4-201ENST00000280154 IRS2Q9Y4H2 1338 aa11.14□□□□□ -0.63
PDCD4-201ENST00000280154 NPHP1O15259 732 aa11.13□□□□□ -0.63
PDCD4-201ENST00000280154 CCDC175P0C221 793 aa11.13□□□□□ -0.63
PDCD4-201ENST00000280154 SF3B3Q15393 1217 aaKnown RBP11.13□□□□□ -0.63
PDCD4-201ENST00000280154 KANK3Q6NY19 840 aa11.13□□□□□ -0.63
PDCD4-201ENST00000280154 CACNA1SQ13698 1873 aa11.13□□□□□ -0.63
PDCD4-201ENST00000280154 PSMD2Q13200 908 aa11.13□□□□□ -0.63
PDCD4-201ENST00000280154 NAALADL2Q58DX5 795 aa11.13□□□□□ -0.63
PDCD4-201ENST00000280154 AMOTL1Q8IY63 956 aa11.13□□□□□ -0.63
PDCD4-201ENST00000280154 PPCSQ9HAB8 311 aa11.13□□□□□ -0.63
PDCD4-201ENST00000280154 FLT3P36888 993 aa11.13□□□□□ -0.63
PDCD4-201ENST00000280154 ZBED6P86452 979 aa11.13□□□□□ -0.63
PDCD4-201ENST00000280154 SUGP1Q8IWZ8 645 aaKnown RBP11.13□□□□□ -0.63
PDCD4-201ENST00000280154 KRI1Q8N9T8 703 aaKnown RBP11.13□□□□□ -0.63
PDCD4-201ENST00000280154 SRCIN1Q9C0H9 1055 aa11.13□□□□□ -0.63
PDCD4-201ENST00000280154 SALL3Q9BXA9 1300 aa11.12□□□□□ -0.63
PDCD4-201ENST00000280154 ZC3H4Q9UPT8 1303 aaKnown RBP11.12□□□□□ -0.63
PDCD4-201ENST00000280154 GRM8O00222 908 aa11.12□□□□□ -0.63
PDCD4-201ENST00000280154 ZRANB2O95218 330 aaKnown RBP eCLIP11.12□□□□□ -0.63
PDCD4-201ENST00000280154 GNAI3P08754 354 aa11.12□□□□□ -0.63
PDCD4-201ENST00000280154 TAF1P21675 1872 aa11.12□□□□□ -0.63
PDCD4-201ENST00000280154 KIF6Q6ZMV9 814 aa11.12□□□□□ -0.63
PDCD4-201ENST00000280154 RPAP2Q8IXW5 612 aaPredicted RBP11.12□□□□□ -0.63
PDCD4-201ENST00000280154 SYTL4Q96C24 671 aaPredicted RBP11.12□□□□□ -0.63
PDCD4-201ENST00000280154 COMMD10Q9Y6G5 202 aa11.12□□□□□ -0.63
PDCD4-201ENST00000280154 HOXA10P31260 410 aaPredicted RBP11.12□□□□□ -0.63
PDCD4-201ENST00000280154 ZNF652Q9Y2D9 606 aa11.12□□□□□ -0.63
PDCD4-201ENST00000280154 MYH13Q9UKX3 1938 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 GRM1Q13255 1194 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 TRAPPC3LQ5T215 181 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 ICE2Q659A1 982 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 SMC5Q8IY18 1101 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 CHCHD4Q8N4Q1 142 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 CRBNQ96SW2 442 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 TSPYL2Q9H2G4 693 aaPredicted RBP11.11□□□□□ -0.63
PDCD4-201ENST00000280154 YY1AP1Q9H869 796 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 DDX49Q9Y6V7 483 aaKnown RBP11.11□□□□□ -0.63
PDCD4-201ENST00000280154 FOCADQ5VW36 1801 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 OATP04181 439 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 CEP85Q6P2H3 762 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 PANK1Q8TE04 598 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 RSPH9Q9H1X1 276 aaPredicted RBP11.11□□□□□ -0.63
PDCD4-201ENST00000280154 ABCC12Q96J65 1359 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 MYH7P12883 1935 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 TSPY2A6NKD2 308 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 TSPY3P0CV98 308 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 TSPY8P0CW00 308 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 CASQ1P31415 396 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 TSPY1Q01534 308 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 CCDC15Q0P6D6 951 aa11.11□□□□□ -0.63
PDCD4-201ENST00000280154 CWC25Q9NXE8 425 aaPredicted RBP11.11□□□□□ -0.63
PDCD4-201ENST00000280154 EIF2S2P20042 333 aaKnown RBP11.1□□□□□ -0.63
PDCD4-201ENST00000280154 ATP8B2P98198 1209 aa11.1□□□□□ -0.63
PDCD4-201ENST00000280154 EN1Q05925 392 aaPredicted RBP11.1□□□□□ -0.63
PDCD4-201ENST00000280154 KIAA1211Q6ZU35 1233 aa11.1□□□□□ -0.63
PDCD4-201ENST00000280154 SAPCD2Q86UD0 394 aa11.1□□□□□ -0.63
PDCD4-201ENST00000280154 SENP3-EIF4A1A0A087X0R7 540 aa11.1□□□□□ -0.63
PDCD4-201ENST00000280154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.1□□□□□ -0.63
PDCD4-201ENST00000280154 FKBP5Q13451 457 aaPredicted RBP11.1□□□□□ -0.63
PDCD4-201ENST00000280154 GNPATO15228 680 aa11.1□□□□□ -0.63
PDCD4-201ENST00000280154 CIAO1O76071 339 aa11.1□□□□□ -0.63
PDCD4-201ENST00000280154 IL4RP24394 825 aa11.1□□□□□ -0.63
PDCD4-201ENST00000280154 GTF2F1P35269 517 aaKnown RBP eCLIP11.1□□□□□ -0.63
PDCD4-201ENST00000280154 DDR1Q08345 913 aa11.1□□□□□ -0.63
PDCD4-201ENST00000280154 PPP2R5BQ15173 497 aa11.1□□□□□ -0.63
PDCD4-201ENST00000280154 TBC1D9BQ66K14 1250 aa11.1□□□□□ -0.63
PDCD4-201ENST00000280154 CCDC85AQ96PX6 553 aaPredicted RBP11.1□□□□□ -0.63
PDCD4-201ENST00000280154 ZHX3Q9H4I2 956 aa11.1□□□□□ -0.63
PDCD4-201ENST00000280154 PLIN1O60240 522 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 ANXA1P04083 346 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 MAP7D2Q96T17 732 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 NYXQ9GZU5 481 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 COPRSQ9NQ92 184 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 ZNF232Q9UNY5 417 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 TMCO5BA8MYB1 307 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 GOLGA6L6A8MZA4 724 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 F6X3S4 739 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 SUSD4Q5VX71 490 aa11.09□□□□□ -0.63
PDCD4-201ENST00000280154 NLGN1Q8N2Q7 840 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms