RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 H0YIN7 160 aa17.3■□□□□ 0.36
TRIM23-202ENST00000274327 IL1R1P14778 569 aa17.3■□□□□ 0.36
TRIM23-202ENST00000274327 CHAF1AQ13111 956 aaPredicted RBP17.3■□□□□ 0.36
TRIM23-202ENST00000274327 ZNF384Q8TF68 577 aa17.3■□□□□ 0.36
TRIM23-202ENST00000274327 NSUN4Q96CB9 384 aaKnown RBP17.3■□□□□ 0.36
TRIM23-202ENST00000274327 CD209Q9NNX6 404 aa17.3■□□□□ 0.36
TRIM23-202ENST00000274327 FOXD4L1Q9NU39 408 aa17.3■□□□□ 0.36
TRIM23-202ENST00000274327 SLX4Q8IY92 1834 aa17.3■□□□□ 0.36
TRIM23-202ENST00000274327 PATL2C9JE40 543 aaKnown RBP17.29■□□□□ 0.36
TRIM23-202ENST00000274327 IMMTQ16891 758 aaKnown RBP17.29■□□□□ 0.36
TRIM23-202ENST00000274327 ADGRA1Q86SQ6 560 aa17.29■□□□□ 0.36
TRIM23-202ENST00000274327 WDR66Q8TBY9 1149 aa17.29■□□□□ 0.36
TRIM23-202ENST00000274327 ZNF622Q969S3 477 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRIM23-202ENST00000274327 ARMT1Q9H993 441 aa17.29■□□□□ 0.36
TRIM23-202ENST00000274327 LIMCH1Q9UPQ0 1083 aa17.29■□□□□ 0.36
TRIM23-202ENST00000274327 E7EWF7 191 aa17.28■□□□□ 0.36
TRIM23-202ENST00000274327 GNAT2P19087 354 aa17.28■□□□□ 0.36
TRIM23-202ENST00000274327 NAA16Q6N069 864 aaPredicted RBP17.28■□□□□ 0.36
TRIM23-202ENST00000274327 NOL8Q76FK4 1167 aaKnown RBP17.28■□□□□ 0.36
TRIM23-202ENST00000274327 LCORLQ8N3X6 602 aa17.28■□□□□ 0.36
TRIM23-202ENST00000274327 ZGPATQ8N5A5 531 aaKnown RBP17.28■□□□□ 0.36
TRIM23-202ENST00000274327 INTS4Q96HW7 963 aaKnown RBP17.28■□□□□ 0.36
TRIM23-202ENST00000274327 KIF13BQ9NQT8 1826 aa17.28■□□□□ 0.36
TRIM23-202ENST00000274327 HMGB1P09429 215 aaKnown RBP17.28■□□□□ 0.36
TRIM23-202ENST00000274327 SPTY2D1Q68D10 685 aaPredicted RBP17.28■□□□□ 0.36
TRIM23-202ENST00000274327 ILDR1Q86SU0 546 aaPredicted RBP17.28■□□□□ 0.36
TRIM23-202ENST00000274327 MPNDQ8N594 471 aa17.28■□□□□ 0.36
TRIM23-202ENST00000274327 CWC22Q9HCG8 908 aaKnown RBP17.28■□□□□ 0.36
TRIM23-202ENST00000274327 CHD4Q14839 1912 aa17.27■□□□□ 0.36
TRIM23-202ENST00000274327 C6orf229H3BNL8 230 aa17.27■□□□□ 0.36
TRIM23-202ENST00000274327 PRDX5P30044 214 aa17.27■□□□□ 0.36
TRIM23-202ENST00000274327 MECOMQ03112 1051 aa17.27■□□□□ 0.36
TRIM23-202ENST00000274327 ZSCAN31Q96LW9 406 aaPredicted RBP17.27■□□□□ 0.36
TRIM23-202ENST00000274327 RIOK1Q9BRS2 568 aaKnown RBP17.27■□□□□ 0.36
TRIM23-202ENST00000274327 EPB41L4AQ9HCS5 686 aaPredicted RBP17.27■□□□□ 0.36
TRIM23-202ENST00000274327 MAGEB6P1A0A0J9YX57 407 aa17.26■□□□□ 0.35
TRIM23-202ENST00000274327 GSG1L2A8MUP6 293 aa17.26■□□□□ 0.35
TRIM23-202ENST00000274327 CHRNA5P30532 468 aa17.26■□□□□ 0.35
TRIM23-202ENST00000274327 TOB2Q14106 344 aaPredicted RBP17.26■□□□□ 0.35
TRIM23-202ENST00000274327 ANKRD1Q15327 319 aa17.26■□□□□ 0.35
TRIM23-202ENST00000274327 OLFM4Q6UX06 510 aa17.26■□□□□ 0.35
TRIM23-202ENST00000274327 IFNL3Q8IZI9 196 aa17.26■□□□□ 0.35
TRIM23-202ENST00000274327 MIGA1Q8NAN2 632 aa17.26■□□□□ 0.35
TRIM23-202ENST00000274327 CNKSR1Q969H4 720 aa17.26■□□□□ 0.35
TRIM23-202ENST00000274327 TIAM2Q8IVF5 1701 aa17.26■□□□□ 0.35
TRIM23-202ENST00000274327 ZNF213O14771 459 aa17.26■□□□□ 0.35
TRIM23-202ENST00000274327 EXOSC10Q01780 885 aaKnown RBP17.26■□□□□ 0.35
TRIM23-202ENST00000274327 DHX32Q7L7V1 743 aaKnown RBP17.26■□□□□ 0.35
TRIM23-202ENST00000274327 JAG2Q9Y219 1238 aa17.26■□□□□ 0.35
TRIM23-202ENST00000274327 PRKAB2O43741 272 aa17.25■□□□□ 0.35
TRIM23-202ENST00000274327 LARGE1O95461 756 aa17.25■□□□□ 0.35
TRIM23-202ENST00000274327 APPP05067 770 aa17.25■□□□□ 0.35
TRIM23-202ENST00000274327 HAND2P61296 217 aa17.25■□□□□ 0.35
TRIM23-202ENST00000274327 DPP8Q6V1X1 898 aaPredicted RBP17.25■□□□□ 0.35
TRIM23-202ENST00000274327 TCEANC2Q96MN5 208 aa17.25■□□□□ 0.35
TRIM23-202ENST00000274327 NBPF3Q9H094 633 aa17.25■□□□□ 0.35
TRIM23-202ENST00000274327 SH2B1Q9NRF2 756 aaPredicted RBP17.25■□□□□ 0.35
TRIM23-202ENST00000274327 SLC4A4Q9Y6R1 1079 aa17.25■□□□□ 0.35
TRIM23-202ENST00000274327 SNED1Q8TER0 1413 aa17.25■□□□□ 0.35
TRIM23-202ENST00000274327 FAM205AQ6ZU69 1335 aa17.24■□□□□ 0.35
TRIM23-202ENST00000274327 LARP6Q9BRS8 491 aaKnown RBP17.24■□□□□ 0.35
TRIM23-202ENST00000274327 COA1Q9GZY4 146 aa17.24■□□□□ 0.35
TRIM23-202ENST00000274327 TMX4Q9H1E5 349 aaPredicted RBP17.24■□□□□ 0.35
TRIM23-202ENST00000274327 TPCN1Q9ULQ1 816 aa17.24■□□□□ 0.35
TRIM23-202ENST00000274327 RAB3GAP1Q15042 981 aa17.24■□□□□ 0.35
TRIM23-202ENST00000274327 Q6ZUG5 572 aa17.24■□□□□ 0.35
TRIM23-202ENST00000274327 C7orf43Q8WVR3 580 aa17.24■□□□□ 0.35
TRIM23-202ENST00000274327 AGXT2Q9BYV1 514 aa17.24■□□□□ 0.35
TRIM23-202ENST00000274327 NAPBQ9H115 298 aa17.24■□□□□ 0.35
TRIM23-202ENST00000274327 LDHBP07195 334 aaKnown RBP17.23■□□□□ 0.35
TRIM23-202ENST00000274327 DYNLL1P63167 89 aaKnown RBP17.23■□□□□ 0.35
TRIM23-202ENST00000274327 NFKBIBQ15653 356 aa17.23■□□□□ 0.35
TRIM23-202ENST00000274327 ME3Q16798 604 aa17.23■□□□□ 0.35
TRIM23-202ENST00000274327 MYH2Q9UKX2 1941 aa17.23■□□□□ 0.35
TRIM23-202ENST00000274327 ST3GAL1Q11201 340 aa17.22■□□□□ 0.35
TRIM23-202ENST00000274327 GRIK5Q16478 980 aa17.22■□□□□ 0.35
TRIM23-202ENST00000274327 DZIP1Q86YF9 867 aaKnown RBP17.22■□□□□ 0.35
TRIM23-202ENST00000274327 TBC1D10CQ8IV04 446 aa17.22■□□□□ 0.35
TRIM23-202ENST00000274327 MB21D2Q8IYB1 491 aaPredicted RBP17.22■□□□□ 0.35
TRIM23-202ENST00000274327 FBXL16Q8N461 479 aa17.22■□□□□ 0.35
TRIM23-202ENST00000274327 EYA3Q99504 573 aa17.22■□□□□ 0.35
TRIM23-202ENST00000274327 RTFDC1Q9BY42 306 aaPredicted RBP17.22■□□□□ 0.35
TRIM23-202ENST00000274327 NACAP1Q9BZK3 213 aa17.22■□□□□ 0.35
TRIM23-202ENST00000274327 ZC3H12CQ9C0D7 883 aaKnown RBP17.22■□□□□ 0.35
TRIM23-202ENST00000274327 RIMBP2O15034 1052 aa17.21■□□□□ 0.35
TRIM23-202ENST00000274327 NCOA7Q8NI08 942 aa17.21■□□□□ 0.35
TRIM23-202ENST00000274327 TBC1D22AQ8WUA7 517 aa17.21■□□□□ 0.35
TRIM23-202ENST00000274327 WDR19Q8NEZ3 1342 aa17.21■□□□□ 0.35
TRIM23-202ENST00000274327 BAZ2AQ9UIF9 1905 aaKnown RBP17.21■□□□□ 0.35
TRIM23-202ENST00000274327 TDO2P48775 406 aa17.2■□□□□ 0.34
TRIM23-202ENST00000274327 GSTO1P78417 241 aa17.2■□□□□ 0.34
TRIM23-202ENST00000274327 NUCB2P80303 420 aa17.2■□□□□ 0.34
TRIM23-202ENST00000274327 GSE1Q14687 1217 aa17.2■□□□□ 0.34
TRIM23-202ENST00000274327 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
TRIM23-202ENST00000274327 GIMAP6Q6P9H5 292 aa17.2■□□□□ 0.34
TRIM23-202ENST00000274327 SDR42E1Q8WUS8 393 aa17.2■□□□□ 0.34
TRIM23-202ENST00000274327 CCDC83Q8IWF9 413 aa17.19■□□□□ 0.34
TRIM23-202ENST00000274327 LRRC2Q9BYS8 371 aa17.19■□□□□ 0.34
TRIM23-202ENST00000274327 AATFQ9NY61 560 aaKnown RBP eCLIP17.19■□□□□ 0.34
TRIM23-202ENST00000274327 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms