RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 UTYO14607 1347 aa14.9□□□□□ -0.02
COL8A1-202ENST00000273342 SALL1Q9NSC2 1324 aa14.9□□□□□ -0.02
COL8A1-202ENST00000273342 DIP2BQ9P265 1576 aa14.9□□□□□ -0.02
COL8A1-202ENST00000273342 ATP2B1P20020 1258 aa14.9□□□□□ -0.02
COL8A1-202ENST00000273342 SMC1AQ14683 1233 aaKnown RBP14.9□□□□□ -0.02
COL8A1-202ENST00000273342 TOGARAM2Q6ZUX3 1019 aa14.9□□□□□ -0.02
COL8A1-202ENST00000273342 CPLX3Q8WVH0 158 aa14.9□□□□□ -0.02
COL8A1-202ENST00000273342 PPP2R2CQ9Y2T4 447 aa14.9□□□□□ -0.02
COL8A1-202ENST00000273342 TFRCP02786 760 aaKnown RBP14.9□□□□□ -0.02
COL8A1-202ENST00000273342 CASQ1P31415 396 aa14.9□□□□□ -0.02
COL8A1-202ENST00000273342 A0A1W2PQ27 194 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 A0A1W2PQ64 194 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 A0A1W2PQD8 194 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 VWA3AA6NCI4 1184 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 TBC1D8O95759 1140 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 CDC27P30260 824 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 LMAN1P49257 510 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 AXDND1Q5T1B0 1012 aaPredicted RBP14.89□□□□□ -0.03
COL8A1-202ENST00000273342 PI16Q6UXB8 463 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 PUF60Q9UHX1 559 aaKnown RBP14.89□□□□□ -0.03
COL8A1-202ENST00000273342 A0A0U1RQJ8 604 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 PDE4BQ07343 736 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 MTF1Q14872 753 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 SKIDA1Q1XH10 827 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 AMOTQ4VCS5 1084 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 ATRIPQ8WXE1 791 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 ZNF274Q96GC6 653 aaPredicted RBP14.89□□□□□ -0.03
COL8A1-202ENST00000273342 MYL10Q9BUA6 226 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 PUS3Q9BZE2 481 aaKnown RBP14.89□□□□□ -0.03
COL8A1-202ENST00000273342 LZTFL1Q9NQ48 299 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 TBX22Q9Y458 520 aa14.89□□□□□ -0.03
COL8A1-202ENST00000273342 PLEKHG1Q9ULL1 1385 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 MYL5Q02045 173 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 PPP2R3AQ06190 1150 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 MCM6Q14566 821 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 CHRNA2Q15822 529 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 LRRFIP1Q32MZ4 808 aaKnown RBP14.88□□□□□ -0.03
COL8A1-202ENST00000273342 CERS3Q8IU89 383 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 C10orf67Q8IYJ2 551 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 CCDC82Q8N4S0 544 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 PARD6BQ9BYG5 372 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 TOPAZ1Q8N9V7 1692 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 TRIM66O15016 1216 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 LONRF3Q496Y0 759 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 CC2D1AQ6P1N0 951 aaPredicted RBP14.88□□□□□ -0.03
COL8A1-202ENST00000273342 DHX58Q96C10 678 aa14.88□□□□□ -0.03
COL8A1-202ENST00000273342 ZMYM1Q5SVZ6 1142 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 WWC2Q6AWC2 1192 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 ATL3Q6DD88 541 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 SHC4Q6S5L8 630 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 FOXP4Q8IVH2 680 aaPredicted RBP14.87□□□□□ -0.03
COL8A1-202ENST00000273342 GRAMD1CQ8IYS0 662 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 NKX2-3Q8TAU0 364 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 CCDC12Q8WUD4 166 aaPredicted RBP14.87□□□□□ -0.03
COL8A1-202ENST00000273342 LCMT1Q9UIC8 334 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 GCP02774 474 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 KIF23Q02241 960 aaPredicted RBP14.87□□□□□ -0.03
COL8A1-202ENST00000273342 BAG1Q99933 345 aaPredicted RBP14.87□□□□□ -0.03
COL8A1-202ENST00000273342 DSCC1Q9BVC3 393 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 KCND1Q9NSA2 647 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 POLR3EQ9NVU0 708 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 PCDHA5Q9Y5H7 936 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 PHLPP2Q6ZVD8 1323 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 CHD2O14647 1828 aaKnown RBP14.87□□□□□ -0.03
COL8A1-202ENST00000273342 EFCAB8A8MWE9 144 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 RNF113AO15541 343 aaKnown RBP14.87□□□□□ -0.03
COL8A1-202ENST00000273342 FGAP02671 866 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 OLFM4Q6UX06 510 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 RALYLQ86SE5 291 aaKnown RBP14.87□□□□□ -0.03
COL8A1-202ENST00000273342 MICU3Q86XE3 530 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 CCDC191Q8NCU4 936 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 HPS5Q9UPZ3 1129 aa14.87□□□□□ -0.03
COL8A1-202ENST00000273342 YEATS4O95619 227 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 CMA1P23946 247 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 CNNM3Q8NE01 707 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 ALG1Q9BT22 464 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 SUGCTQ9HAC7 445 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 ARFGAP3Q9NP61 516 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 HELLSQ9NRZ9 838 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 INTS13Q9NVM9 706 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 SH3TC1Q8TE82 1336 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 DIP2AQ14689 1571 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 A0A1B0GUL7 405 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 PHACTR2O75167 634 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 TNNT3P45378 269 aaPredicted RBP14.86□□□□□ -0.03
COL8A1-202ENST00000273342 VPS37DQ86XT2 251 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 VSTM4Q8IW00 320 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 AGXT2Q9BYV1 514 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 SENP2Q9HC62 589 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 INCENPQ9NQS7 918 aa14.86□□□□□ -0.03
COL8A1-202ENST00000273342 ZSCAN12O43309 604 aa14.85□□□□□ -0.03
COL8A1-202ENST00000273342 APPP05067 770 aa14.85□□□□□ -0.03
COL8A1-202ENST00000273342 ZSCAN26Q16670 478 aa14.85□□□□□ -0.03
COL8A1-202ENST00000273342 CREBRFQ8IUR6 639 aa14.85□□□□□ -0.03
COL8A1-202ENST00000273342 FEZ2Q9UHY8 353 aaPredicted RBP14.85□□□□□ -0.03
COL8A1-202ENST00000273342 PALLDQ8WX93 1383 aa14.85□□□□□ -0.03
COL8A1-202ENST00000273342 AGLP35573 1532 aa14.85□□□□□ -0.03
COL8A1-202ENST00000273342 COBLO75128 1261 aa14.85□□□□□ -0.03
COL8A1-202ENST00000273342 ADORA1P30542 326 aa14.85□□□□□ -0.03
COL8A1-202ENST00000273342 IMMTQ16891 758 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms