RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 CEP135Q66GS9 1140 aa16.79■□□□□ 0.28
CNOT9-201ENST00000273064 RPGRQ92834 1020 aaKnown RBP16.79■□□□□ 0.28
CNOT9-201ENST00000273064 CLIC6Q96NY7 704 aa16.79■□□□□ 0.28
CNOT9-201ENST00000273064 SAP30BPQ9UHR5 308 aaKnown RBP16.79■□□□□ 0.28
CNOT9-201ENST00000273064 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.79■□□□□ 0.28
CNOT9-201ENST00000273064 ADAMTS13Q76LX8 1427 aa16.79■□□□□ 0.28
CNOT9-201ENST00000273064 NRXN1Q9ULB1 1477 aa16.79■□□□□ 0.28
CNOT9-201ENST00000273064 RIMBP2O15034 1052 aa16.79■□□□□ 0.28
CNOT9-201ENST00000273064 PRKAB2O43741 272 aa16.79■□□□□ 0.28
CNOT9-201ENST00000273064 ZNF827Q17R98 1081 aa16.79■□□□□ 0.28
CNOT9-201ENST00000273064 KRT40Q6A162 431 aa16.79■□□□□ 0.28
CNOT9-201ENST00000273064 ZHX1Q9UKY1 873 aaPredicted RBP16.79■□□□□ 0.28
CNOT9-201ENST00000273064 PDIA3P30101 505 aaKnown RBP16.78■□□□□ 0.28
CNOT9-201ENST00000273064 FAM160A1Q05DH4 1040 aa16.78■□□□□ 0.28
CNOT9-201ENST00000273064 ARHGAP29Q52LW3 1261 aa16.78■□□□□ 0.28
CNOT9-201ENST00000273064 DIS3L2Q8IYB7 885 aaKnown RBP16.78■□□□□ 0.28
CNOT9-201ENST00000273064 AK9Q5TCS8 1911 aa16.78■□□□□ 0.28
CNOT9-201ENST00000273064 PTPRUQ92729 1446 aa16.78■□□□□ 0.28
CNOT9-201ENST00000273064 FAM47AQ5JRC9 791 aa16.78■□□□□ 0.28
CNOT9-201ENST00000273064 GOLGA6L1Q8N7Z2 621 aa16.78■□□□□ 0.28
CNOT9-201ENST00000273064 MCM7P33993 719 aa16.78■□□□□ 0.28
CNOT9-201ENST00000273064 EIF6P56537 245 aaKnown RBP16.78■□□□□ 0.28
CNOT9-201ENST00000273064 TRMT44Q8IYL2 757 aaKnown RBP16.78■□□□□ 0.28
CNOT9-201ENST00000273064 CBFA2T2O43439 604 aa16.77■□□□□ 0.28
CNOT9-201ENST00000273064 PDE6AP16499 860 aa16.77■□□□□ 0.28
CNOT9-201ENST00000273064 SNW1Q13573 536 aaKnown RBP16.77■□□□□ 0.28
CNOT9-201ENST00000273064 PUM3Q15397 648 aaKnown RBP16.77■□□□□ 0.28
CNOT9-201ENST00000273064 ANO1Q5XXA6 986 aa16.77■□□□□ 0.28
CNOT9-201ENST00000273064 HEATR3Q7Z4Q2 680 aa16.77■□□□□ 0.28
CNOT9-201ENST00000273064 CLSTN2Q9H4D0 955 aa16.77■□□□□ 0.28
CNOT9-201ENST00000273064 KAT14Q9H8E8 782 aa16.77■□□□□ 0.28
CNOT9-201ENST00000273064 ARGLU1Q9NWB6 273 aaPredicted RBP16.77■□□□□ 0.28
CNOT9-201ENST00000273064 SPATA5Q8NB90 893 aa16.77■□□□□ 0.28
CNOT9-201ENST00000273064 AK7Q96M32 723 aa16.77■□□□□ 0.28
CNOT9-201ENST00000273064 CLIC4Q9Y696 253 aa16.77■□□□□ 0.28
CNOT9-201ENST00000273064 ZNF202O95125 648 aa16.77■□□□□ 0.27
CNOT9-201ENST00000273064 EPS15P42566 896 aa16.77■□□□□ 0.27
CNOT9-201ENST00000273064 SCARF1Q14162 830 aa16.77■□□□□ 0.27
CNOT9-201ENST00000273064 CCDC96Q2M329 555 aa16.77■□□□□ 0.27
CNOT9-201ENST00000273064 PPP1R9BQ96SB3 815 aa16.77■□□□□ 0.27
CNOT9-201ENST00000273064 CLTCQ00610 1675 aaKnown RBP16.76■□□□□ 0.27
CNOT9-201ENST00000273064 VWA3AA6NCI4 1184 aa16.76■□□□□ 0.27
CNOT9-201ENST00000273064 EPB41L2O43491 1005 aaKnown RBP16.76■□□□□ 0.27
CNOT9-201ENST00000273064 COBLO75128 1261 aa16.76■□□□□ 0.27
CNOT9-201ENST00000273064 CTSWP56202 376 aa16.76■□□□□ 0.27
CNOT9-201ENST00000273064 GNG11P61952 73 aa16.76■□□□□ 0.27
CNOT9-201ENST00000273064 KRT23Q9C075 422 aa16.76■□□□□ 0.27
CNOT9-201ENST00000273064 POLR2DO15514 142 aaKnown RBP16.76■□□□□ 0.27
CNOT9-201ENST00000273064 UBA7P41226 1012 aa16.76■□□□□ 0.27
CNOT9-201ENST00000273064 VPS54Q9P1Q0 977 aa16.76■□□□□ 0.27
CNOT9-201ENST00000273064 PYCARDQ9ULZ3 195 aa16.76■□□□□ 0.27
CNOT9-201ENST00000273064 CEP131Q9UPN4 1083 aa16.76■□□□□ 0.27
CNOT9-201ENST00000273064 ERVV-2B6SEH9 535 aa16.76■□□□□ 0.27
CNOT9-201ENST00000273064 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
CNOT9-201ENST00000273064 FRMPD1Q5SYB0 1578 aa16.76■□□□□ 0.27
CNOT9-201ENST00000273064 MAP2P11137 1827 aaKnown RBP16.76■□□□□ 0.27
CNOT9-201ENST00000273064 BTBD18B2RXH4 712 aa16.75■□□□□ 0.27
CNOT9-201ENST00000273064 POLR3GO15318 223 aaPredicted RBP16.75■□□□□ 0.27
CNOT9-201ENST00000273064 NPHP4O75161 1426 aaPredicted RBP16.75■□□□□ 0.27
CNOT9-201ENST00000273064 KARSQ15046 597 aaKnown RBP16.75■□□□□ 0.27
CNOT9-201ENST00000273064 PDCL3Q9H2J4 239 aa16.75■□□□□ 0.27
CNOT9-201ENST00000273064 CYP2D7A0A087X1C5 515 aa16.75■□□□□ 0.27
CNOT9-201ENST00000273064 TOB2Q14106 344 aaPredicted RBP16.75■□□□□ 0.27
CNOT9-201ENST00000273064 BRINP3Q76B58 766 aa16.75■□□□□ 0.27
CNOT9-201ENST00000273064 ZBTB38Q8NAP3 1195 aaPredicted RBP16.75■□□□□ 0.27
CNOT9-201ENST00000273064 TRERF1Q96PN7 1200 aa16.75■□□□□ 0.27
CNOT9-201ENST00000273064 NUP88Q99567 741 aaPredicted RBP16.75■□□□□ 0.27
CNOT9-201ENST00000273064 DEF6Q9H4E7 631 aa16.75■□□□□ 0.27
CNOT9-201ENST00000273064 TCEAL9Q9UHQ7 104 aa16.75■□□□□ 0.27
CNOT9-201ENST00000273064 ZNF622Q969S3 477 aaKnown RBP eCLIP16.75■□□□□ 0.27
CNOT9-201ENST00000273064 OVOS2A0A0J9YW53 1432 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 OVOS2Q6IE36 1432 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 TRIM75PA6NK02 468 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 KIF4BQ2VIQ3 1234 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 NOM1Q5C9Z4 860 aaKnown RBP16.74■□□□□ 0.27
CNOT9-201ENST00000273064 SYT10Q6XYQ8 523 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 NSUN7Q8NE18 718 aaKnown RBP16.74■□□□□ 0.27
CNOT9-201ENST00000273064 LPIN2Q92539 896 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 CRNKL1Q9BZJ0 848 aaKnown RBP16.74■□□□□ 0.27
CNOT9-201ENST00000273064 PCDHA7Q9UN72 937 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 N4BP3O15049 544 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 FAM193AP78312 1265 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 PDE4BQ07343 736 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 CRACR2BQ8N4Y2 399 aaPredicted RBP16.74■□□□□ 0.27
CNOT9-201ENST00000273064 FAM170AA1A519 330 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 RIOK3O14730 519 aaKnown RBP16.74■□□□□ 0.27
CNOT9-201ENST00000273064 TSPY3P0CV98 308 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 TSPY8P0CW00 308 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 NDUFA8P51970 172 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 MYSM1Q5VVJ2 828 aa16.74■□□□□ 0.27
CNOT9-201ENST00000273064 USP31Q70CQ4 1352 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
CNOT9-201ENST00000273064 PNOCQ13519 176 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 ZMYM1Q5SVZ6 1142 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 MTERF4Q7Z6M4 381 aaKnown RBP16.73■□□□□ 0.27
CNOT9-201ENST00000273064 DSCC1Q9BVC3 393 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 SSH2Q76I76 1423 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 USP17L12C9JPN9 530 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 USP17L21D6R901 530 aa16.73■□□□□ 0.27
CNOT9-201ENST00000273064 ZNF75DP51815 510 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms