RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 CDC37L1Q7L3B6 337 aa11.82□□□□□ -0.52
CPNE9-201ENST00000273027 MYRIPQ8NFW9 859 aa11.82□□□□□ -0.52
CPNE9-201ENST00000273027 TDRD7Q8NHU6 1098 aaKnown RBP11.82□□□□□ -0.52
CPNE9-201ENST00000273027 ZNF512BQ96KM6 892 aaPredicted RBP11.82□□□□□ -0.52
CPNE9-201ENST00000273027 CEP126Q9P2H0 1117 aa11.82□□□□□ -0.52
CPNE9-201ENST00000273027 ZC3H4Q9UPT8 1303 aaKnown RBP11.82□□□□□ -0.52
CPNE9-201ENST00000273027 POTECB2RU33 542 aa11.81□□□□□ -0.52
CPNE9-201ENST00000273027 POLRMTO00411 1230 aaKnown RBP11.81□□□□□ -0.52
CPNE9-201ENST00000273027 FOXN1O15353 648 aa11.81□□□□□ -0.52
CPNE9-201ENST00000273027 IFIT1P09914 478 aaKnown RBP11.81□□□□□ -0.52
CPNE9-201ENST00000273027 TM4SF1P30408 202 aa11.81□□□□□ -0.52
CPNE9-201ENST00000273027 FOXD4L6Q3SYB3 417 aaPredicted RBP11.81□□□□□ -0.52
CPNE9-201ENST00000273027 HSP90AB3PQ58FF7 597 aa11.81□□□□□ -0.52
CPNE9-201ENST00000273027 DPY19L2Q6NUT2 758 aa11.81□□□□□ -0.52
CPNE9-201ENST00000273027 GIMAP6Q6P9H5 292 aa11.81□□□□□ -0.52
CPNE9-201ENST00000273027 SARM1Q6SZW1 724 aa11.81□□□□□ -0.52
CPNE9-201ENST00000273027 FOXD4L3Q6VB84 417 aaPredicted RBP11.81□□□□□ -0.52
CPNE9-201ENST00000273027 ATG9AQ7Z3C6 839 aa11.81□□□□□ -0.52
CPNE9-201ENST00000273027 CHAMP1Q96JM3 812 aa11.81□□□□□ -0.52
CPNE9-201ENST00000273027 DBNDD2Q9BQY9 259 aa11.81□□□□□ -0.52
CPNE9-201ENST00000273027 UQCRHLA0A096LP55 91 aa11.8□□□□□ -0.52
CPNE9-201ENST00000273027 ZPR1O75312 459 aa11.8□□□□□ -0.52
CPNE9-201ENST00000273027 PCCAP05165 728 aaPredicted RBP11.8□□□□□ -0.52
CPNE9-201ENST00000273027 UQCRHP07919 91 aa11.8□□□□□ -0.52
CPNE9-201ENST00000273027 TTF1Q15361 905 aaPredicted RBP11.8□□□□□ -0.52
CPNE9-201ENST00000273027 DNTTIP2Q5QJE6 756 aaKnown RBP11.8□□□□□ -0.52
CPNE9-201ENST00000273027 BICD2Q8TD16 824 aa11.8□□□□□ -0.52
CPNE9-201ENST00000273027 BRF1Q92994 677 aa11.8□□□□□ -0.52
CPNE9-201ENST00000273027 DNAJC2Q99543 621 aaKnown RBP11.8□□□□□ -0.52
CPNE9-201ENST00000273027 ISCA1Q9BUE6 129 aa11.8□□□□□ -0.52
CPNE9-201ENST00000273027 CREBZFQ9NS37 354 aa11.8□□□□□ -0.52
CPNE9-201ENST00000273027 CDHR2Q9BYE9 1310 aa11.8□□□□□ -0.52
CPNE9-201ENST00000273027 ANKRD36CQ5JPF3 1778 aa11.79□□□□□ -0.52
CPNE9-201ENST00000273027 TCIRG1Q13488 830 aa11.79□□□□□ -0.52
CPNE9-201ENST00000273027 IMMTQ16891 758 aaKnown RBP11.79□□□□□ -0.52
CPNE9-201ENST00000273027 CCDC57Q2TAC2 916 aa11.79□□□□□ -0.52
CPNE9-201ENST00000273027 CCDC73Q6ZRK6 1079 aa11.79□□□□□ -0.52
CPNE9-201ENST00000273027 BRAPQ7Z569 592 aa11.79□□□□□ -0.52
CPNE9-201ENST00000273027 TTLL6Q8N841 843 aa11.79□□□□□ -0.52
CPNE9-201ENST00000273027 NSUN7Q8NE18 718 aaKnown RBP11.79□□□□□ -0.52
CPNE9-201ENST00000273027 AIDAQ96BJ3 306 aa11.79□□□□□ -0.52
CPNE9-201ENST00000273027 NEUROD6Q96NK8 337 aa11.79□□□□□ -0.52
CPNE9-201ENST00000273027 LARP6Q9BRS8 491 aaKnown RBP11.79□□□□□ -0.52
CPNE9-201ENST00000273027 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.79□□□□□ -0.52
CPNE9-201ENST00000273027 NAT10Q9H0A0 1025 aaKnown RBP11.79□□□□□ -0.52
CPNE9-201ENST00000273027 PRDM10Q9NQV6 1147 aa11.79□□□□□ -0.52
CPNE9-201ENST00000273027 DACT1Q9NYF0 836 aa11.79□□□□□ -0.52
CPNE9-201ENST00000273027 MRVI1Q9Y6F6 885 aa11.79□□□□□ -0.52
CPNE9-201ENST00000273027 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.79□□□□□ -0.52
CPNE9-201ENST00000273027 DDX60Q8IY21 1712 aaKnown RBP11.79□□□□□ -0.52
CPNE9-201ENST00000273027 SALL1Q9NSC2 1324 aa11.79□□□□□ -0.52
CPNE9-201ENST00000273027 MYH3P11055 1940 aa11.78□□□□□ -0.52
CPNE9-201ENST00000273027 A0A1W2PQ27 194 aa11.78□□□□□ -0.52
CPNE9-201ENST00000273027 A0A1W2PQ64 194 aa11.78□□□□□ -0.52
CPNE9-201ENST00000273027 A0A1W2PQD8 194 aa11.78□□□□□ -0.52
CPNE9-201ENST00000273027 E7EWF7 191 aa11.78□□□□□ -0.52
CPNE9-201ENST00000273027 HSPD1P10809 573 aaKnown RBP11.78□□□□□ -0.52
CPNE9-201ENST00000273027 SYCP1Q15431 976 aa11.78□□□□□ -0.52
CPNE9-201ENST00000273027 CHADLQ6NUI6 762 aa11.78□□□□□ -0.52
CPNE9-201ENST00000273027 KLHDC4Q8TBB5 520 aa11.78□□□□□ -0.52
CPNE9-201ENST00000273027 KIAA1524Q8TCG1 905 aa11.78□□□□□ -0.52
CPNE9-201ENST00000273027 A0A1B0GUL7 405 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 NBPF26B4DH59 902 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 ATP5J2-PTCD1G3V325 749 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 GOLGA6L19H0YKK7 550 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 GOLIM4O00461 696 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 YEATS4O95619 227 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 TUBB4AP04350 444 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 CSF1RP07333 972 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 LIG1P18858 919 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 CTCFP49711 727 aaPredicted RBP11.77□□□□□ -0.53
CPNE9-201ENST00000273027 ZNF165P49910 485 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 SCRN1Q12765 414 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 STX1AQ16623 288 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 TTC39AQ5SRH9 613 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 NBPF10Q6P3W6 841 aaKnown RBP11.77□□□□□ -0.53
CPNE9-201ENST00000273027 INTS5Q6P9B9 1019 aaKnown RBP11.77□□□□□ -0.53
CPNE9-201ENST00000273027 KIF6Q6ZMV9 814 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 C2CD5Q86YS7 1000 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 NBPF15Q8N660 670 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 KCNG4Q8TDN1 519 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 APPBP2Q92624 585 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 MRFAP1L1Q96HT8 127 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 ANO10Q9NW15 660 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 ZNF219Q9P2Y4 722 aaPredicted RBP11.77□□□□□ -0.53
CPNE9-201ENST00000273027 ZMYM6O95789 1325 aa11.77□□□□□ -0.53
CPNE9-201ENST00000273027 H0YIN7 160 aa11.76□□□□□ -0.53
CPNE9-201ENST00000273027 NFKBIEO00221 500 aa11.76□□□□□ -0.53
CPNE9-201ENST00000273027 KINO60870 393 aaKnown RBP11.76□□□□□ -0.53
CPNE9-201ENST00000273027 CDKL5O76039 1030 aa11.76□□□□□ -0.53
CPNE9-201ENST00000273027 STARD3NLO95772 234 aa11.76□□□□□ -0.53
CPNE9-201ENST00000273027 LBX1P52954 281 aa11.76□□□□□ -0.53
CPNE9-201ENST00000273027 FAM160A1Q05DH4 1040 aa11.76□□□□□ -0.53
CPNE9-201ENST00000273027 NFIXQ14938 502 aa11.76□□□□□ -0.53
CPNE9-201ENST00000273027 ERFEQ4G0M1 354 aa11.76□□□□□ -0.53
CPNE9-201ENST00000273027 GORABQ5T7V8 394 aa11.76□□□□□ -0.53
CPNE9-201ENST00000273027 ADALQ6DHV7 355 aa11.76□□□□□ -0.53
CPNE9-201ENST00000273027 CPLX2Q6PUV4 134 aaKnown RBP11.76□□□□□ -0.53
CPNE9-201ENST00000273027 DDX46Q7L014 1031 aaKnown RBP11.76□□□□□ -0.53
CPNE9-201ENST00000273027 FERMT3Q86UX7 667 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms