RNA–Protein interactions for RNA: ENST00000272395.2

TRIM43-201, Transcript of tripartite motif containing 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM43, Length 1,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43-201ENST00000272395 C9orf131Q5VYM1 1079 aa10.35□□□□□ -0.75
TRIM43-201ENST00000272395 TICAM2Q86XR7 235 aa10.35□□□□□ -0.75
TRIM43-201ENST00000272395 MAP4K1Q92918 833 aa10.35□□□□□ -0.75
TRIM43-201ENST00000272395 PSMD1Q99460 953 aa10.35□□□□□ -0.75
TRIM43-201ENST00000272395 RTFDC1Q9BY42 306 aaPredicted RBP10.35□□□□□ -0.75
TRIM43-201ENST00000272395 COPRSQ9NQ92 184 aa10.35□□□□□ -0.75
TRIM43-201ENST00000272395 RNF181Q9P0P0 153 aa10.35□□□□□ -0.75
TRIM43-201ENST00000272395 GGA1Q9UJY5 639 aa10.35□□□□□ -0.75
TRIM43-201ENST00000272395 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.35□□□□□ -0.75
TRIM43-201ENST00000272395 XDHP47989 1333 aa10.35□□□□□ -0.75
TRIM43-201ENST00000272395 ARFGEF1Q9Y6D6 1849 aa10.35□□□□□ -0.75
TRIM43-201ENST00000272395 LRRC37AA6NMS7 1700 aa10.35□□□□□ -0.75
TRIM43-201ENST00000272395 F13A1P00488 732 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 PTH1RQ03431 593 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 JAKMIP1Q96N16 626 aaKnown RBP10.34□□□□□ -0.75
TRIM43-201ENST00000272395 ANKRD2Q9GZV1 360 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 PODXL2Q9NZ53 605 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 HMG20BQ9P0W2 317 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 LTBP3Q9NS15 1303 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 PPIP5K2O43314 1243 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 CIAO1O76071 339 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 LMNB1P20700 586 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 PDCP20941 246 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 ATP2B4P23634 1241 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 IARSP41252 1262 aaKnown RBP10.34□□□□□ -0.75
TRIM43-201ENST00000272395 KCNJ4P48050 445 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 TSGA10IPQ3SY00 556 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 VGLL2Q8N8G2 317 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 EAF2Q96CJ1 260 aaPredicted RBP10.34□□□□□ -0.75
TRIM43-201ENST00000272395 CHAMP1Q96JM3 812 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 ZKSCAN5Q9Y2L8 839 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 RBM8AQ9Y5S9 174 aaKnown RBP10.34□□□□□ -0.75
TRIM43-201ENST00000272395 COL4A5P29400 1685 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 ZNF804BA4D1E1 1349 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 MROH5Q6ZUA9 1318 aa10.34□□□□□ -0.75
TRIM43-201ENST00000272395 MED23Q9ULK4 1368 aa10.33□□□□□ -0.76
TRIM43-201ENST00000272395 TFCP2Q12800 502 aa10.33□□□□□ -0.76
TRIM43-201ENST00000272395 DOK7Q18PE1 504 aa10.33□□□□□ -0.76
TRIM43-201ENST00000272395 WASHC4Q2M389 1173 aa10.33□□□□□ -0.76
TRIM43-201ENST00000272395 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
TRIM43-201ENST00000272395 CREB3L3Q68CJ9 461 aa10.33□□□□□ -0.76
TRIM43-201ENST00000272395 TXNRD3Q86VQ6 643 aa10.33□□□□□ -0.76
TRIM43-201ENST00000272395 LARGE2Q8N3Y3 721 aa10.33□□□□□ -0.76
TRIM43-201ENST00000272395 CNKSR2Q8WXI2 1034 aa10.33□□□□□ -0.76
TRIM43-201ENST00000272395 LTBP1Q14766 1721 aa10.32□□□□□ -0.76
TRIM43-201ENST00000272395 GADD45BO75293 160 aaPredicted RBP10.32□□□□□ -0.76
TRIM43-201ENST00000272395 IL15P40933 162 aaPredicted RBP10.32□□□□□ -0.76
TRIM43-201ENST00000272395 NMIQ13287 307 aaPredicted RBP10.32□□□□□ -0.76
TRIM43-201ENST00000272395 KRT32Q14532 448 aa10.32□□□□□ -0.76
TRIM43-201ENST00000272395 SUPT20HQ8NEM7 779 aa10.32□□□□□ -0.76
TRIM43-201ENST00000272395 MYH15Q9Y2K3 1946 aa10.32□□□□□ -0.76
TRIM43-201ENST00000272395 SLC27A2O14975 620 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 PDE8BO95263 885 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 ATP5JP18859 108 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 GJB2P29033 226 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 KIAA2012Q0VF49 1180 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 ADCK5Q3MIX3 580 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 FSD1Q9BTV5 496 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 DBNDD1Q9H9R9 158 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 CEP126Q9P2H0 1117 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 MTMR6Q9Y217 621 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 CNPY2Q9Y2B0 182 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 LEMD3Q9Y2U8 911 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 LAMA4Q16363 1823 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 FER1L6Q2WGJ9 1857 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 PLCB2Q00722 1185 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 PUM3Q15397 648 aaKnown RBP10.31□□□□□ -0.76
TRIM43-201ENST00000272395 BLOC1S2Q6QNY1 142 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 CCDC83Q8IWF9 413 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 NIM1KQ8IY84 436 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 EYA3Q99504 573 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 ZC3H12CQ9C0D7 883 aaKnown RBP10.31□□□□□ -0.76
TRIM43-201ENST00000272395 FBXO3Q9UK99 471 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 ELP1O95163 1332 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 IRS2Q9Y4H2 1338 aa10.31□□□□□ -0.76
TRIM43-201ENST00000272395 LARGE1O95461 756 aa10.3□□□□□ -0.76
TRIM43-201ENST00000272395 FGFR2P21802 821 aa10.3□□□□□ -0.76
TRIM43-201ENST00000272395 RPS6KB1P23443 525 aa10.3□□□□□ -0.76
TRIM43-201ENST00000272395 ADORA1P30542 326 aa10.3□□□□□ -0.76
TRIM43-201ENST00000272395 GYG1P46976 350 aa10.3□□□□□ -0.76
TRIM43-201ENST00000272395 ATP2B3Q16720 1220 aa10.3□□□□□ -0.76
TRIM43-201ENST00000272395 FAM227BQ96M60 508 aa10.3□□□□□ -0.76
TRIM43-201ENST00000272395 CCDC8Q9H0W5 538 aaPredicted RBP10.3□□□□□ -0.76
TRIM43-201ENST00000272395 GDPD2Q9HCC8 539 aa10.3□□□□□ -0.76
TRIM43-201ENST00000272395 KCNQ5Q9NR82 932 aa10.3□□□□□ -0.76
TRIM43-201ENST00000272395 ZNF541Q9H0D2 1346 aa10.3□□□□□ -0.76
TRIM43-201ENST00000272395 A0A0D9SFI3 127 aa10.29□□□□□ -0.76
TRIM43-201ENST00000272395 YDJCA8MPS7 323 aa10.29□□□□□ -0.76
TRIM43-201ENST00000272395 G3V3G9 751 aa10.29□□□□□ -0.76
TRIM43-201ENST00000272395 RRP9O43818 475 aaKnown RBP10.29□□□□□ -0.76
TRIM43-201ENST00000272395 ECE2O60344 883 aa10.29□□□□□ -0.76
TRIM43-201ENST00000272395 CPA1P15085 419 aa10.29□□□□□ -0.76
TRIM43-201ENST00000272395 TIMM10P62072 90 aa10.29□□□□□ -0.76
TRIM43-201ENST00000272395 UBE4AQ14139 1066 aa10.29□□□□□ -0.76
TRIM43-201ENST00000272395 ME3Q16798 604 aa10.29□□□□□ -0.76
TRIM43-201ENST00000272395 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
TRIM43-201ENST00000272395 JDP2Q8WYK2 163 aa10.29□□□□□ -0.76
TRIM43-201ENST00000272395 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.29□□□□□ -0.76
TRIM43-201ENST00000272395 A0A1B0GUL7 405 aa10.28□□□□□ -0.76
TRIM43-201ENST00000272395 RAD17O75943 681 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms