RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 M0R2C6 588 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 WASHC4Q2M389 1173 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 SLFNL1Q499Z3 407 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 SLC9C2Q5TAH2 1124 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 TMED8Q6PL24 325 aaPredicted RBP18.31■□□□□ 0.52
COPS3-201ENST00000268717 TMC4Q7Z404 712 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 SP8Q8IXZ3 490 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 SPRYD3Q8NCJ5 442 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 TMX4Q9H1E5 349 aaPredicted RBP18.31■□□□□ 0.52
COPS3-201ENST00000268717 CTNNA3Q9UI47 895 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 LEMD3Q9Y2U8 911 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 WTIPA6NIX2 430 aaPredicted RBP18.31■□□□□ 0.52
COPS3-201ENST00000268717 PDE6AP16499 860 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 IARSP41252 1262 aaKnown RBP18.31■□□□□ 0.52
COPS3-201ENST00000268717 C1QTNF8P60827 252 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 ADCK5Q3MIX3 580 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 FAM84BQ96KN1 310 aaPredicted RBP18.31■□□□□ 0.52
COPS3-201ENST00000268717 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
COPS3-201ENST00000268717 DOCK2Q92608 1830 aa18.3■□□□□ 0.52
COPS3-201ENST00000268717 TCRBV5S4A2TA0A5A2 114 aa18.3■□□□□ 0.52
COPS3-201ENST00000268717 IDH1O75874 414 aaKnown RBP18.3■□□□□ 0.52
COPS3-201ENST00000268717 C15orf52Q6ZUT6 534 aaKnown RBP18.3■□□□□ 0.52
COPS3-201ENST00000268717 MYO5AQ9Y4I1 1855 aaKnown RBP18.3■□□□□ 0.52
COPS3-201ENST00000268717 XDHP47989 1333 aa18.29■□□□□ 0.52
COPS3-201ENST00000268717 IRS2Q9Y4H2 1338 aa18.29■□□□□ 0.52
COPS3-201ENST00000268717 MYH7P12883 1935 aa18.29■□□□□ 0.52
COPS3-201ENST00000268717 GPAA1O43292 621 aa18.29■□□□□ 0.52
COPS3-201ENST00000268717 HMGB1P09429 215 aaKnown RBP18.29■□□□□ 0.52
COPS3-201ENST00000268717 ANKRD1Q15327 319 aa18.29■□□□□ 0.52
COPS3-201ENST00000268717 DPY19L2Q6NUT2 758 aa18.29■□□□□ 0.52
COPS3-201ENST00000268717 BLOC1S2Q6QNY1 142 aa18.29■□□□□ 0.52
COPS3-201ENST00000268717 PUS7LQ9H0K6 701 aaKnown RBP18.29■□□□□ 0.52
COPS3-201ENST00000268717 PDRG1Q9NUG6 133 aa18.29■□□□□ 0.52
COPS3-201ENST00000268717 LIMCH1Q9UPQ0 1083 aa18.29■□□□□ 0.52
COPS3-201ENST00000268717 WDR90Q96KV7 1748 aa18.29■□□□□ 0.52
COPS3-201ENST00000268717 CYP21A2P08686 494 aa18.28■□□□□ 0.52
COPS3-201ENST00000268717 NFKBIBQ15653 356 aa18.28■□□□□ 0.52
COPS3-201ENST00000268717 VPS37DQ86XT2 251 aa18.28■□□□□ 0.52
COPS3-201ENST00000268717 ZSCAN31Q96LW9 406 aaPredicted RBP18.28■□□□□ 0.52
COPS3-201ENST00000268717 ZMYM6O95789 1325 aa18.28■□□□□ 0.52
COPS3-201ENST00000268717 ZNF532Q9HCE3 1301 aa18.28■□□□□ 0.52
COPS3-201ENST00000268717 COL4A5P29400 1685 aa18.28■□□□□ 0.52
COPS3-201ENST00000268717 RPS6KB1P23443 525 aa18.27■□□□□ 0.52
COPS3-201ENST00000268717 GYG1P46976 350 aa18.27■□□□□ 0.52
COPS3-201ENST00000268717 AK2P54819 239 aa18.27■□□□□ 0.52
COPS3-201ENST00000268717 RRAGCQ9HB90 399 aa18.27■□□□□ 0.52
COPS3-201ENST00000268717 SH2B1Q9NRF2 756 aaPredicted RBP18.27■□□□□ 0.52
COPS3-201ENST00000268717 HIBADHP31937 336 aaKnown RBP18.27■□□□□ 0.51
COPS3-201ENST00000268717 RAB3GAP1Q15042 981 aa18.27■□□□□ 0.51
COPS3-201ENST00000268717 MPNDQ8N594 471 aa18.27■□□□□ 0.51
COPS3-201ENST00000268717 RTFDC1Q9BY42 306 aaPredicted RBP18.27■□□□□ 0.51
COPS3-201ENST00000268717 LTBP1Q14766 1721 aa18.26■□□□□ 0.51
COPS3-201ENST00000268717 DUOX1Q9NRD9 1551 aa18.26■□□□□ 0.51
COPS3-201ENST00000268717 FOXP2O15409 715 aa18.26■□□□□ 0.51
COPS3-201ENST00000268717 NUCB2P80303 420 aa18.26■□□□□ 0.51
COPS3-201ENST00000268717 DPP8Q6V1X1 898 aaPredicted RBP18.26■□□□□ 0.51
COPS3-201ENST00000268717 NEK1Q96PY6 1258 aa18.26■□□□□ 0.51
COPS3-201ENST00000268717 PODXL2Q9NZ53 605 aa18.26■□□□□ 0.51
COPS3-201ENST00000268717 COL1A1P02452 1464 aaPredicted RBP18.26■□□□□ 0.51
COPS3-201ENST00000268717 FZD9O00144 591 aa18.25■□□□□ 0.51
COPS3-201ENST00000268717 ALX1Q15699 326 aa18.25■□□□□ 0.51
COPS3-201ENST00000268717 JDP2Q8WYK2 163 aa18.25■□□□□ 0.51
COPS3-201ENST00000268717 VPS33BQ9H267 617 aa18.25■□□□□ 0.51
COPS3-201ENST00000268717 GNAT2P19087 354 aa18.24■□□□□ 0.51
COPS3-201ENST00000268717 ATP2B4P23634 1241 aa18.24■□□□□ 0.51
COPS3-201ENST00000268717 IMMTQ16891 758 aaKnown RBP18.24■□□□□ 0.51
COPS3-201ENST00000268717 LARGE2Q8N3Y3 721 aa18.24■□□□□ 0.51
COPS3-201ENST00000268717 MAGEB6Q8N7X4 407 aa18.24■□□□□ 0.51
COPS3-201ENST00000268717 SUPT20HQ8NEM7 779 aa18.24■□□□□ 0.51
COPS3-201ENST00000268717 AIDAQ96BJ3 306 aa18.24■□□□□ 0.51
COPS3-201ENST00000268717 ANKIB1Q9P2G1 1089 aa18.24■□□□□ 0.51
COPS3-201ENST00000268717 ZNF541Q9H0D2 1346 aa18.24■□□□□ 0.51
COPS3-201ENST00000268717 PPIP5K2O43314 1243 aa18.23■□□□□ 0.51
COPS3-201ENST00000268717 TOMM70O94826 608 aa18.23■□□□□ 0.51
COPS3-201ENST00000268717 DDNO94850 711 aaPredicted RBP18.23■□□□□ 0.51
COPS3-201ENST00000268717 STRBPQ96SI9 672 aaKnown RBP18.23■□□□□ 0.51
COPS3-201ENST00000268717 LRP2BPQ9P2M1 347 aa18.23■□□□□ 0.51
COPS3-201ENST00000268717 TAF6LQ9Y6J9 622 aa18.23■□□□□ 0.51
COPS3-201ENST00000268717 SCN4AP35499 1836 aa18.23■□□□□ 0.51
COPS3-201ENST00000268717 POTECB2RU33 542 aa18.23■□□□□ 0.51
COPS3-201ENST00000268717 FGAP02671 866 aa18.23■□□□□ 0.51
COPS3-201ENST00000268717 VEGFAP15692 232 aaPredicted RBP18.23■□□□□ 0.51
COPS3-201ENST00000268717 KLRK1P26718 216 aa18.23■□□□□ 0.51
COPS3-201ENST00000268717 AOC3Q16853 763 aa18.23■□□□□ 0.51
COPS3-201ENST00000268717 FBXL16Q8N461 479 aa18.23■□□□□ 0.51
COPS3-201ENST00000268717 SALL1Q9NSC2 1324 aa18.23■□□□□ 0.51
COPS3-201ENST00000268717 CPA1P15085 419 aa18.22■□□□□ 0.51
COPS3-201ENST00000268717 NBR1Q14596 966 aa18.22■□□□□ 0.51
COPS3-201ENST00000268717 CLEC17AQ6ZS10 378 aa18.22■□□□□ 0.51
COPS3-201ENST00000268717 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
COPS3-201ENST00000268717 NSFL1CQ9UNZ2 370 aaKnown RBP18.22■□□□□ 0.51
COPS3-201ENST00000268717 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.22■□□□□ 0.51
COPS3-201ENST00000268717 E7EWF7 191 aa18.21■□□□□ 0.51
COPS3-201ENST00000268717 STOX1Q6ZVD7 989 aa18.21■□□□□ 0.51
COPS3-201ENST00000268717 DHX32Q7L7V1 743 aaKnown RBP18.21■□□□□ 0.51
COPS3-201ENST00000268717 ZNF804AQ7Z570 1209 aa18.21■□□□□ 0.51
COPS3-201ENST00000268717 ZGPATQ8N5A5 531 aaKnown RBP18.21■□□□□ 0.51
COPS3-201ENST00000268717 L3MBTL3Q96JM7 780 aaPredicted RBP18.21■□□□□ 0.51
COPS3-201ENST00000268717 IQSEC3Q9UPP2 1182 aaPredicted RBP18.21■□□□□ 0.51
COPS3-201ENST00000268717 PATL2C9JE40 543 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms