RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 GNAT2P19087 354 aa19.47■□□□□ 0.71
TPM1-201ENST00000267996 ANKRD1Q15327 319 aa19.47■□□□□ 0.71
TPM1-201ENST00000267996 NOL8Q76FK4 1167 aaKnown RBP19.47■□□□□ 0.71
TPM1-201ENST00000267996 WDR66Q8TBY9 1149 aa19.47■□□□□ 0.71
TPM1-201ENST00000267996 NSUN4Q96CB9 384 aaKnown RBP19.47■□□□□ 0.71
TPM1-201ENST00000267996 ZSCAN31Q96LW9 406 aaPredicted RBP19.47■□□□□ 0.71
TPM1-201ENST00000267996 GPR101Q96P66 508 aaPredicted RBP19.47■□□□□ 0.71
TPM1-201ENST00000267996 CD209Q9NNX6 404 aa19.47■□□□□ 0.71
TPM1-201ENST00000267996 H0YIN7 160 aa19.46■□□□□ 0.71
TPM1-201ENST00000267996 CHAF1AQ13111 956 aaPredicted RBP19.46■□□□□ 0.71
TPM1-201ENST00000267996 ADGRA1Q86SQ6 560 aa19.46■□□□□ 0.71
TPM1-201ENST00000267996 ZGPATQ8N5A5 531 aaKnown RBP19.46■□□□□ 0.71
TPM1-201ENST00000267996 ARMT1Q9H993 441 aa19.46■□□□□ 0.71
TPM1-201ENST00000267996 LAMA4Q16363 1823 aa19.46■□□□□ 0.71
TPM1-201ENST00000267996 EXOSC10Q01780 885 aaKnown RBP19.46■□□□□ 0.71
TPM1-201ENST00000267996 SPTY2D1Q68D10 685 aaPredicted RBP19.46■□□□□ 0.71
TPM1-201ENST00000267996 NAA16Q6N069 864 aaPredicted RBP19.46■□□□□ 0.71
TPM1-201ENST00000267996 LCORLQ8N3X6 602 aa19.46■□□□□ 0.71
TPM1-201ENST00000267996 RIOK1Q9BRS2 568 aaKnown RBP19.46■□□□□ 0.71
TPM1-201ENST00000267996 SH2B1Q9NRF2 756 aaPredicted RBP19.46■□□□□ 0.71
TPM1-201ENST00000267996 MAST2Q6P0Q8 1798 aa19.45■□□□□ 0.7
TPM1-201ENST00000267996 DUOX1Q9NRD9 1551 aa19.45■□□□□ 0.7
TPM1-201ENST00000267996 GSG1L2A8MUP6 293 aa19.45■□□□□ 0.7
TPM1-201ENST00000267996 TOB2Q14106 344 aaPredicted RBP19.45■□□□□ 0.7
TPM1-201ENST00000267996 NFKBIBQ15653 356 aa19.45■□□□□ 0.7
TPM1-201ENST00000267996 DHX32Q7L7V1 743 aaKnown RBP19.45■□□□□ 0.7
TPM1-201ENST00000267996 EPB41L4AQ9HCS5 686 aaPredicted RBP19.45■□□□□ 0.7
TPM1-201ENST00000267996 ZNF213O14771 459 aa19.44■□□□□ 0.7
TPM1-201ENST00000267996 MECOMQ03112 1051 aa19.44■□□□□ 0.7
TPM1-201ENST00000267996 RAB3GAP1Q15042 981 aa19.44■□□□□ 0.7
TPM1-201ENST00000267996 IFNL3Q8IZI9 196 aa19.44■□□□□ 0.7
TPM1-201ENST00000267996 MPNDQ8N594 471 aa19.44■□□□□ 0.7
TPM1-201ENST00000267996 C10orf71Q711Q0 1435 aa19.44■□□□□ 0.7
TPM1-201ENST00000267996 MAGEB6P1A0A0J9YX57 407 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 C6orf229H3BNL8 230 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 APPP05067 770 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 PRDX5P30044 214 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 MIGA1Q8NAN2 632 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 ZNF622Q969S3 477 aaKnown RBP eCLIP19.43■□□□□ 0.76e-7■■□□□ 13.8
TPM1-201ENST00000267996 TCEANC2Q96MN5 208 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 AGXT2Q9BYV1 514 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 NBPF3Q9H094 633 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 TPCN1Q9ULQ1 816 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 KIAA1551Q9HCM1 1747 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 CCDC88AQ3V6T2 1871 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 LARGE1O95461 756 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 HAND2P61296 217 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 FBXL16Q8N461 479 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 CNKSR1Q969H4 720 aa19.43■□□□□ 0.7
TPM1-201ENST00000267996 LARP6Q9BRS8 491 aaKnown RBP19.43■□□□□ 0.7
TPM1-201ENST00000267996 PRKAB2O43741 272 aa19.42■□□□□ 0.7
TPM1-201ENST00000267996 ME3Q16798 604 aa19.42■□□□□ 0.7
TPM1-201ENST00000267996 SLC4A4Q9Y6R1 1079 aa19.42■□□□□ 0.7
TPM1-201ENST00000267996 NUCB2P80303 420 aa19.41■□□□□ 0.7
TPM1-201ENST00000267996 OLFM4Q6UX06 510 aa19.41■□□□□ 0.7
TPM1-201ENST00000267996 DPP8Q6V1X1 898 aaPredicted RBP19.41■□□□□ 0.7
TPM1-201ENST00000267996 FAM205AQ6ZU69 1335 aa19.41■□□□□ 0.7
TPM1-201ENST00000267996 SLX4Q8IY92 1834 aa19.41■□□□□ 0.7
TPM1-201ENST00000267996 NACAP1Q9BZK3 213 aa19.41■□□□□ 0.7
TPM1-201ENST00000267996 COA1Q9GZY4 146 aa19.41■□□□□ 0.7
TPM1-201ENST00000267996 NAPBQ9H115 298 aa19.41■□□□□ 0.7
TPM1-201ENST00000267996 LDHBP07195 334 aaKnown RBP19.4■□□□□ 0.7
TPM1-201ENST00000267996 CHRNA5P30532 468 aa19.4■□□□□ 0.7
TPM1-201ENST00000267996 Q6ZUG5 572 aa19.4■□□□□ 0.7
TPM1-201ENST00000267996 MB21D2Q8IYB1 491 aaPredicted RBP19.4■□□□□ 0.7
TPM1-201ENST00000267996 C7orf43Q8WVR3 580 aa19.4■□□□□ 0.7
TPM1-201ENST00000267996 TMX4Q9H1E5 349 aaPredicted RBP19.4■□□□□ 0.7
TPM1-201ENST00000267996 JAG2Q9Y219 1238 aa19.4■□□□□ 0.7
TPM1-201ENST00000267996 WDR19Q8NEZ3 1342 aa19.4■□□□□ 0.7
TPM1-201ENST00000267996 ST3GAL1Q11201 340 aa19.4■□□□□ 0.7
TPM1-201ENST00000267996 TBC1D10CQ8IV04 446 aa19.4■□□□□ 0.7
TPM1-201ENST00000267996 TIAM2Q8IVF5 1701 aa19.39■□□□□ 0.69
TPM1-201ENST00000267996 DYNLL1P63167 89 aaKnown RBP19.39■□□□□ 0.69
TPM1-201ENST00000267996 NBR1Q14596 966 aa19.39■□□□□ 0.69
TPM1-201ENST00000267996 GIMAP6Q6P9H5 292 aa19.39■□□□□ 0.69
TPM1-201ENST00000267996 NCOA7Q8NI08 942 aa19.39■□□□□ 0.69
TPM1-201ENST00000267996 ZC3H12CQ9C0D7 883 aaKnown RBP19.39■□□□□ 0.69
TPM1-201ENST00000267996 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.39■□□□□ 0.69
TPM1-201ENST00000267996 GRIK5Q16478 980 aa19.38■□□□□ 0.69
TPM1-201ENST00000267996 DZIP1Q86YF9 867 aaKnown RBP19.38■□□□□ 0.69
TPM1-201ENST00000267996 TBC1D22AQ8WUA7 517 aa19.38■□□□□ 0.69
TPM1-201ENST00000267996 DLEC1Q9Y238 1755 aa19.38■□□□□ 0.69
TPM1-201ENST00000267996 SNED1Q8TER0 1413 aa19.38■□□□□ 0.69
TPM1-201ENST00000267996 CHD4Q14839 1912 aa19.38■□□□□ 0.69
TPM1-201ENST00000267996 GSTO1P78417 241 aa19.37■□□□□ 0.69
TPM1-201ENST00000267996 TNPO1Q92973 898 aaKnown RBP19.37■□□□□ 0.69
TPM1-201ENST00000267996 EYA3Q99504 573 aa19.37■□□□□ 0.69
TPM1-201ENST00000267996 RTFDC1Q9BY42 306 aaPredicted RBP19.37■□□□□ 0.69
TPM1-201ENST00000267996 MCM5P33992 734 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 TDO2P48775 406 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 EVCP57679 992 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 CC2D2BQ6DHV5 1058 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 CLEC17AQ6ZS10 378 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 ILDR1Q86SU0 546 aaPredicted RBP19.36■□□□□ 0.69
TPM1-201ENST00000267996 CCDC83Q8IWF9 413 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 LRRC2Q9BYS8 371 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 ANAPC4Q9UJX5 808 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 KIF13BQ9NQT8 1826 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 RIMBP2O15034 1052 aa19.36■□□□□ 0.69
TPM1-201ENST00000267996 ANTXR2P58335 489 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms