RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 RAB34Q9BZG1 259 aa12.05□□□□□ -0.48
CPT1A-201ENST00000265641 GNL3LQ9NVN8 582 aaKnown RBP12.05□□□□□ -0.48
CPT1A-201ENST00000265641 USP16Q9Y5T5 823 aa12.05□□□□□ -0.48
CPT1A-201ENST00000265641 NUTM2GQ5VZR2 741 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 PYCARDQ9ULZ3 195 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 SUFUQ9UMX1 484 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 EIF3CLB5ME19 914 aaKnown RBP12.04□□□□□ -0.48
CPT1A-201ENST00000265641 CREB3O43889 395 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 DESP17661 470 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 LONRF2Q1L5Z9 754 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 SOGA3Q5TF21 947 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 EIF3CQ99613 913 aaKnown RBP12.04□□□□□ -0.48
CPT1A-201ENST00000265641 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.04□□□□□ -0.48
CPT1A-201ENST00000265641 ABCC10Q5T3U5 1492 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 WDR7Q9Y4E6 1490 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 E7EVH7 732 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 VAMP4O75379 141 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 CCDC122Q5T0U0 273 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 SRGAP1Q7Z6B7 1085 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 GPT2Q8TD30 523 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 CCDC61Q9Y6R9 512 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 ADGRF5Q8IZF2 1346 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 NPC1L1Q9UHC9 1359 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 ATP8B2P98198 1209 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 CLEC17AQ6ZS10 378 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 CNPY4Q8N129 248 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 SEC62Q99442 399 aaKnown RBP12.04□□□□□ -0.48
CPT1A-201ENST00000265641 KIF24Q5T7B8 1368 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 CASQ2O14958 399 aaPredicted RBP12.04□□□□□ -0.48
CPT1A-201ENST00000265641 PFDN1O60925 122 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 GADD45BO75293 160 aaPredicted RBP12.04□□□□□ -0.48
CPT1A-201ENST00000265641 VIMP08670 466 aaKnown RBP12.04□□□□□ -0.48
CPT1A-201ENST00000265641 CLCN6P51797 869 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 ZBTB16Q05516 673 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 ABTB2Q8N961 1025 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 SREK1Q8WXA9 508 aaKnown RBP12.04□□□□□ -0.48
CPT1A-201ENST00000265641 PPP1R12CQ9BZL4 782 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 FAM204AQ9H8W3 233 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 PDE11AQ9HCR9 933 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 EMILIN1Q9Y6C2 1016 aa12.04□□□□□ -0.48
CPT1A-201ENST00000265641 RAD21O60216 631 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 PEX19P40855 299 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 FYB2Q5VWT5 728 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 IQCA1Q86XH1 822 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 JPH2Q9BR39 696 aaPredicted RBP12.03□□□□□ -0.48
CPT1A-201ENST00000265641 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.03□□□□□ -0.48
CPT1A-201ENST00000265641 NUP58Q9BVL2 599 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 ZBTB12Q9Y330 459 aaPredicted RBP12.03□□□□□ -0.48
CPT1A-201ENST00000265641 LOC102724159A0A0B4J2E5 919 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 G3V3G9 751 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 CCT5P48643 541 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 BIRC2Q13490 618 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 PWP2Q15269 919 aaKnown RBP12.03□□□□□ -0.48
CPT1A-201ENST00000265641 DCAF8Q5TAQ9 597 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 CNNM1Q9NRU3 951 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 SEPT11Q9NVA2 429 aaKnown RBP12.03□□□□□ -0.48
CPT1A-201ENST00000265641 UHRF1BP1LA0JNW5 1464 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 BTBD11A6QL63 1104 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 IDEP14735 1019 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 AMOTQ4VCS5 1084 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 MLKLQ8NB16 471 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 ANKRD7Q92527 254 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 TCEANC2Q96MN5 208 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 PSD3Q9NYI0 1048 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 PSMA7O14818 248 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 CEP104O60308 925 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 P3H4Q92791 437 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 MTMR7Q9Y216 660 aa12.03□□□□□ -0.48
CPT1A-201ENST00000265641 BICDL2A1A5D9 508 aa12.02□□□□□ -0.48
CPT1A-201ENST00000265641 NOP2P46087 812 aaKnown RBP12.02□□□□□ -0.48
CPT1A-201ENST00000265641 SEPT2Q15019 361 aa12.02□□□□□ -0.48
CPT1A-201ENST00000265641 MUM1Q2TAK8 710 aa12.02□□□□□ -0.48
CPT1A-201ENST00000265641 RASEFQ8IZ41 740 aa12.02□□□□□ -0.48
CPT1A-201ENST00000265641 CAPZA3Q96KX2 299 aa12.02□□□□□ -0.48
CPT1A-201ENST00000265641 TRIM47Q96LD4 638 aa12.02□□□□□ -0.48
CPT1A-201ENST00000265641 NLRP2Q9NX02 1062 aa12.02□□□□□ -0.48
CPT1A-201ENST00000265641 COL17A1Q9UMD9 1497 aaPredicted RBP12.02□□□□□ -0.49
CPT1A-201ENST00000265641 RUFY3Q7L099 469 aa12.02□□□□□ -0.49
CPT1A-201ENST00000265641 SRLQ86TD4 932 aa12.02□□□□□ -0.49
CPT1A-201ENST00000265641 APLFQ8IW19 511 aaPredicted RBP12.02□□□□□ -0.49
CPT1A-201ENST00000265641 ZNF213O14771 459 aa12.02□□□□□ -0.49
CPT1A-201ENST00000265641 EVI5O60447 810 aa12.02□□□□□ -0.49
CPT1A-201ENST00000265641 IFIT1P09914 478 aaKnown RBP12.02□□□□□ -0.49
CPT1A-201ENST00000265641 IARSP41252 1262 aaKnown RBP12.02□□□□□ -0.49
CPT1A-201ENST00000265641 FBXO38Q6PIJ6 1188 aa12.02□□□□□ -0.49
CPT1A-201ENST00000265641 TXNDC2Q86VQ3 553 aa12.02□□□□□ -0.49
CPT1A-201ENST00000265641 IFT81Q8WYA0 676 aa12.02□□□□□ -0.49
CPT1A-201ENST00000265641 TSC22D3Q99576 134 aa12.02□□□□□ -0.49
CPT1A-201ENST00000265641 PRDM4Q9UKN5 801 aa12.02□□□□□ -0.49
CPT1A-201ENST00000265641 CD109Q6YHK3 1445 aa12.01□□□□□ -0.49
CPT1A-201ENST00000265641 ATP2A1O14983 1001 aa12.01□□□□□ -0.49
CPT1A-201ENST00000265641 E2F4Q16254 413 aa12.01□□□□□ -0.49
CPT1A-201ENST00000265641 SND1Q7KZF4 910 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■■□□ 15.8
CPT1A-201ENST00000265641 CCDC65Q8IXS2 484 aa12.01□□□□□ -0.49
CPT1A-201ENST00000265641 CDC23Q9UJX2 597 aa12.01□□□□□ -0.49
CPT1A-201ENST00000265641 ANAPC4Q9UJX5 808 aa12.01□□□□□ -0.49
CPT1A-201ENST00000265641 PPFIA2O75334 1257 aa12.01□□□□□ -0.49
CPT1A-201ENST00000265641 PPP1R7Q15435 360 aa12.01□□□□□ -0.49
CPT1A-201ENST00000265641 RRAGBQ5VZM2 374 aa12.01□□□□□ -0.49
CPT1A-201ENST00000265641 CCDC63Q8NA47 563 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms