RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 TLR7Q9NYK1 1049 aaKnown RBP10.38□□□□□ -0.75
ERCC8-201ENST00000265038 HMG20BQ9P0W2 317 aa10.38□□□□□ -0.75
ERCC8-201ENST00000265038 DBNLQ9UJU6 430 aaKnown RBP10.38□□□□□ -0.75
ERCC8-201ENST00000265038 PSME4Q14997 1843 aa10.37□□□□□ -0.75
ERCC8-201ENST00000265038 HDLBPQ00341 1268 aaKnown RBP10.37□□□□□ -0.75
ERCC8-201ENST00000265038 PRAMEF18Q5VWM3 479 aa10.37□□□□□ -0.75
ERCC8-201ENST00000265038 PI16Q6UXB8 463 aa10.37□□□□□ -0.75
ERCC8-201ENST00000265038 IL1RAPL2Q9NP60 686 aa10.37□□□□□ -0.75
ERCC8-201ENST00000265038 MKRN1Q9UHC7 482 aaKnown RBP10.37□□□□□ -0.75
ERCC8-201ENST00000265038 PCDHB15Q9Y5E8 787 aa10.37□□□□□ -0.75
ERCC8-201ENST00000265038 PDS5AQ29RF7 1337 aaKnown RBP10.37□□□□□ -0.75
ERCC8-201ENST00000265038 CLRN2A0PK11 232 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 CDCA5Q96FF9 252 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 TLL2Q9Y6L7 1015 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 RASSF10A6NK89 507 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 APBB1O00213 710 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 RAB11FIP3O75154 756 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 UQCRFS1P1P0C7P4 283 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 MCAMP43121 646 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 CCDC158Q5M9N0 1113 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 APOBEC3HQ6NTF7 200 aaKnown RBP10.36□□□□□ -0.75
ERCC8-201ENST00000265038 HHIPL2Q6UWX4 724 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 SPATA5Q8NB90 893 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 TEKT1Q969V4 418 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 KIF1BPQ96EK5 621 aa10.36□□□□□ -0.75
ERCC8-201ENST00000265038 TDRD3Q9H7E2 651 aaKnown RBP10.36□□□□□ -0.75
ERCC8-201ENST00000265038 ZNF70Q9UC06 446 aaPredicted RBP10.36□□□□□ -0.75
ERCC8-201ENST00000265038 ABT1Q9ULW3 272 aaKnown RBP10.36□□□□□ -0.75
ERCC8-201ENST00000265038 SUPT16HQ9Y5B9 1047 aaKnown RBP10.36□□□□□ -0.75
ERCC8-201ENST00000265038 CNTNAP1P78357 1384 aa10.35□□□□□ -0.75
ERCC8-201ENST00000265038 MYO1BO43795 1136 aa10.35□□□□□ -0.75
ERCC8-201ENST00000265038 LDHBP07195 334 aaKnown RBP10.35□□□□□ -0.75
ERCC8-201ENST00000265038 DIXDC1Q155Q3 683 aa10.35□□□□□ -0.75
ERCC8-201ENST00000265038 DEFB115Q30KQ5 88 aa10.35□□□□□ -0.75
ERCC8-201ENST00000265038 SPDYE2Q495Y8 402 aa10.35□□□□□ -0.75
ERCC8-201ENST00000265038 TTC39AQ5SRH9 613 aa10.35□□□□□ -0.75
ERCC8-201ENST00000265038 SAPCD2Q86UD0 394 aa10.35□□□□□ -0.75
ERCC8-201ENST00000265038 AACSQ86V21 672 aa10.35□□□□□ -0.75
ERCC8-201ENST00000265038 APOBEC3FQ8IUX4 373 aaKnown RBP10.35□□□□□ -0.75
ERCC8-201ENST00000265038 ZNF512BQ96KM6 892 aaPredicted RBP10.35□□□□□ -0.75
ERCC8-201ENST00000265038 ZDHHC15Q96MV8 337 aa10.35□□□□□ -0.75
ERCC8-201ENST00000265038 MAST3O60307 1309 aa10.35□□□□□ -0.75
ERCC8-201ENST00000265038 TBC1D9Q6ZT07 1266 aa10.34□□□□□ -0.75
ERCC8-201ENST00000265038 DEFB129Q9H1M3 183 aa10.34□□□□□ -0.75
ERCC8-201ENST00000265038 DCTPP1Q9H773 170 aa10.34□□□□□ -0.75
ERCC8-201ENST00000265038 GBA2Q9HCG7 927 aaPredicted RBP10.34□□□□□ -0.75
ERCC8-201ENST00000265038 SNRKQ9NRH2 765 aa10.34□□□□□ -0.75
ERCC8-201ENST00000265038 ABCF2Q9UG63 623 aa10.34□□□□□ -0.75
ERCC8-201ENST00000265038 VEGFBP49765 207 aa10.34□□□□□ -0.75
ERCC8-201ENST00000265038 CLASRPQ8N2M8 674 aaKnown RBP10.34□□□□□ -0.75
ERCC8-201ENST00000265038 ZGPATQ8N5A5 531 aaKnown RBP10.34□□□□□ -0.75
ERCC8-201ENST00000265038 JMYQ8N9B5 988 aa10.34□□□□□ -0.75
ERCC8-201ENST00000265038 VEZTQ9HBM0 779 aa10.34□□□□□ -0.75
ERCC8-201ENST00000265038 DAGLAQ9Y4D2 1042 aa10.34□□□□□ -0.75
ERCC8-201ENST00000265038 ZAP70P43403 619 aa10.33□□□□□ -0.76
ERCC8-201ENST00000265038 C2orf69Q8N8R5 385 aa10.33□□□□□ -0.76
ERCC8-201ENST00000265038 ZNF384Q8TF68 577 aa10.33□□□□□ -0.76
ERCC8-201ENST00000265038 TCP10L2B9ZVM9 353 aa10.33□□□□□ -0.76
ERCC8-201ENST00000265038 CYP2E1P05181 493 aaPredicted RBP10.33□□□□□ -0.76
ERCC8-201ENST00000265038 CACNB3P54284 484 aa10.33□□□□□ -0.76
ERCC8-201ENST00000265038 RASA3Q14644 834 aa10.33□□□□□ -0.76
ERCC8-201ENST00000265038 SPTY2D1Q68D10 685 aaPredicted RBP10.33□□□□□ -0.76
ERCC8-201ENST00000265038 ERICH6Q7L0X2 663 aa10.33□□□□□ -0.76
ERCC8-201ENST00000265038 PPP2R3BQ9Y5P8 575 aa10.33□□□□□ -0.76
ERCC8-201ENST00000265038 SMARCA5O60264 1052 aaPredicted RBP10.32□□□□□ -0.76
ERCC8-201ENST00000265038 HUNKP57058 714 aa10.32□□□□□ -0.76
ERCC8-201ENST00000265038 MECOMQ03112 1051 aa10.32□□□□□ -0.76
ERCC8-201ENST00000265038 CYP4F22Q6NT55 531 aa10.32□□□□□ -0.76
ERCC8-201ENST00000265038 CDC42EP5Q6NZY7 148 aa10.32□□□□□ -0.76
ERCC8-201ENST00000265038 MOB2Q70IA6 237 aa10.32□□□□□ -0.76
ERCC8-201ENST00000265038 EXOC6Q8TAG9 804 aa10.32□□□□□ -0.76
ERCC8-201ENST00000265038 NSUN4Q96CB9 384 aaKnown RBP10.32□□□□□ -0.76
ERCC8-201ENST00000265038 FAM163AQ96GL9 167 aaPredicted RBP10.32□□□□□ -0.76
ERCC8-201ENST00000265038 HHIPL1Q96JK4 782 aa10.32□□□□□ -0.76
ERCC8-201ENST00000265038 LRRCC1Q9C099 1032 aa10.32□□□□□ -0.76
ERCC8-201ENST00000265038 BCL11AQ9H165 835 aa10.32□□□□□ -0.76
ERCC8-201ENST00000265038 IFIT2P09913 472 aaKnown RBP10.31□□□□□ -0.76
ERCC8-201ENST00000265038 FKBP1BP68106 108 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 NBPF12Q5TAG4 269 aaPredicted RBP10.31□□□□□ -0.76
ERCC8-201ENST00000265038 DZIP1Q86YF9 867 aaKnown RBP10.31□□□□□ -0.76
ERCC8-201ENST00000265038 TEPSINQ96N21 525 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 PIH1D3Q9NQM4 214 aaKnown RBP10.31□□□□□ -0.76
ERCC8-201ENST00000265038 NDUFB9Q9Y6M9 179 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 ARAP2Q8WZ64 1704 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 GAKO14976 1311 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 WDR33Q9C0J8 1336 aaKnown RBP10.31□□□□□ -0.76
ERCC8-201ENST00000265038 MAPK8IP2Q13387 824 aaPredicted RBP10.31□□□□□ -0.76
ERCC8-201ENST00000265038 TNFAIP1Q13829 316 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 CDAN1Q8IWY9 1227 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 CAPNS2Q96L46 248 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 TMEM39BQ9GZU3 492 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 USP40Q9NVE5 1235 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 RAI14Q9P0K7 980 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 LRP2BPQ9P2M1 347 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 FZD1Q9UP38 647 aa10.31□□□□□ -0.76
ERCC8-201ENST00000265038 UBE2Q2LH0YL09 131 aa10.3□□□□□ -0.76
ERCC8-201ENST00000265038 NF2P35240 595 aa10.3□□□□□ -0.76
ERCC8-201ENST00000265038 PRKG1Q13976 671 aa10.3□□□□□ -0.76
ERCC8-201ENST00000265038 FKBP1CQ5VVH2 108 aa10.3□□□□□ -0.76
ERCC8-201ENST00000265038 PAXIP1Q6ZW49 1069 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms