RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 DBNDD2Q9BQY9 259 aa18.55■□□□□ 0.56
GPC1-201ENST00000264039 BCCIPQ9P287 314 aaKnown RBP eCLIP18.55■□□□□ 0.56
GPC1-201ENST00000264039 CLTCL1P53675 1640 aa18.55■□□□□ 0.56
GPC1-201ENST00000264039 OSCARQ8IYS5 282 aa18.54■□□□□ 0.56
GPC1-201ENST00000264039 MYSM1Q5VVJ2 828 aa18.54■□□□□ 0.56
GPC1-201ENST00000264039 PHKBQ93100 1093 aa18.54■□□□□ 0.56
GPC1-201ENST00000264039 VPS16Q9H269 839 aa18.54■□□□□ 0.56
GPC1-201ENST00000264039 KIAA0232Q92628 1395 aa18.54■□□□□ 0.56
GPC1-201ENST00000264039 ZRANB2O95218 330 aaKnown RBP eCLIP18.54■□□□□ 0.56
GPC1-201ENST00000264039 TFCP2Q12800 502 aa18.54■□□□□ 0.56
GPC1-201ENST00000264039 STIM1Q13586 685 aa18.54■□□□□ 0.56
GPC1-201ENST00000264039 NAA16Q6N069 864 aaPredicted RBP18.54■□□□□ 0.56
GPC1-201ENST00000264039 GRM8O00222 908 aa18.53■□□□□ 0.56
GPC1-201ENST00000264039 GRAMD1CQ8IYS0 662 aa18.53■□□□□ 0.56
GPC1-201ENST00000264039 LAMC1P11047 1609 aa18.53■□□□□ 0.56
GPC1-201ENST00000264039 ARHGAP31Q2M1Z3 1444 aa18.53■□□□□ 0.56
GPC1-201ENST00000264039 GUCY2CP25092 1073 aa18.53■□□□□ 0.56
GPC1-201ENST00000264039 VSNL1P62760 191 aa18.53■□□□□ 0.56
GPC1-201ENST00000264039 IMMTQ16891 758 aaKnown RBP18.53■□□□□ 0.56
GPC1-201ENST00000264039 TADA2BQ86TJ2 420 aa18.53■□□□□ 0.56
GPC1-201ENST00000264039 ACRBPQ8NEB7 543 aa18.53■□□□□ 0.56
GPC1-201ENST00000264039 AIFM3Q96NN9 605 aa18.53■□□□□ 0.56
GPC1-201ENST00000264039 NAPGQ99747 312 aaPredicted RBP18.53■□□□□ 0.56
GPC1-201ENST00000264039 DBF4Q9UBU7 674 aaPredicted RBP18.53■□□□□ 0.56
GPC1-201ENST00000264039 TIMM10P62072 90 aa18.53■□□□□ 0.56
GPC1-201ENST00000264039 PIP4K2BP78356 416 aa18.53■□□□□ 0.56
GPC1-201ENST00000264039 EEF2KMTQ96G04 330 aa18.53■□□□□ 0.56
GPC1-201ENST00000264039 POLR2DO15514 142 aaKnown RBP18.52■□□□□ 0.56
GPC1-201ENST00000264039 EIF5P55010 431 aaKnown RBP18.52■□□□□ 0.56
GPC1-201ENST00000264039 KCTD16Q68DU8 428 aa18.52■□□□□ 0.56
GPC1-201ENST00000264039 SUCLG2Q96I99 432 aa18.52■□□□□ 0.56
GPC1-201ENST00000264039 LGR6Q9HBX8 967 aa18.52■□□□□ 0.56
GPC1-201ENST00000264039 CDC23Q9UJX2 597 aa18.52■□□□□ 0.56
GPC1-201ENST00000264039 TRPM2O94759 1503 aa18.52■□□□□ 0.56
GPC1-201ENST00000264039 ABCC1P33527 1531 aa18.52■□□□□ 0.56
GPC1-201ENST00000264039 VWA3AA6NCI4 1184 aa18.52■□□□□ 0.56
GPC1-201ENST00000264039 PPP2R5AQ15172 486 aa18.52■□□□□ 0.56
GPC1-201ENST00000264039 TEX2Q8IWB9 1127 aa18.52■□□□□ 0.56
GPC1-201ENST00000264039 FMR1NBQ8N0W7 255 aaPredicted RBP18.52■□□□□ 0.56
GPC1-201ENST00000264039 KCNH3Q9ULD8 1083 aa18.52■□□□□ 0.56
GPC1-201ENST00000264039 IFIT1P09914 478 aaKnown RBP18.52■□□□□ 0.55
GPC1-201ENST00000264039 GNGT1P63211 74 aa18.52■□□□□ 0.55
GPC1-201ENST00000264039 IL17REQ8NFR9 667 aa18.52■□□□□ 0.55
GPC1-201ENST00000264039 SAMSN1Q9NSI8 373 aaKnown RBP18.52■□□□□ 0.55
GPC1-201ENST00000264039 PRC1O43663 620 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 PSME1Q06323 249 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 MCTP2Q6DN12 878 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 MMS22LQ6ZRQ5 1243 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 LINC00301Q8NCQ3 95 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 MYL10Q9BUA6 226 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 SLC26A6Q9BXS9 759 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 CEP152O94986 1710 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 SALL3Q9BXA9 1300 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 SND1Q7KZF4 910 aaKnown RBP eCLIP18.51■□□□□ 0.554e-6■■■■□ 23.4
GPC1-201ENST00000264039 MTMR7Q9Y216 660 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 TTC21BQ7Z4L5 1316 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 NPATQ14207 1427 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 MACROD2A1Z1Q3 448 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 PRR29P0C7W0 189 aa18.51■□□□□ 0.55
GPC1-201ENST00000264039 ENOX2Q16206 610 aaKnown RBP18.5■□□□□ 0.55
GPC1-201ENST00000264039 VSTM4Q8IW00 320 aa18.5■□□□□ 0.55
GPC1-201ENST00000264039 FAM71BQ8TC56 605 aa18.5■□□□□ 0.55
GPC1-201ENST00000264039 MRFAP1Q9Y605 127 aa18.5■□□□□ 0.55
GPC1-201ENST00000264039 NEBLO76041 1014 aa18.5■□□□□ 0.55
GPC1-201ENST00000264039 BRMS1Q9HCU9 246 aa18.5■□□□□ 0.55
GPC1-201ENST00000264039 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.5■□□□□ 0.55
GPC1-201ENST00000264039 CHD1O14646 1710 aa18.49■□□□□ 0.55
GPC1-201ENST00000264039 GOLGA6BA6NDN3 693 aa18.49■□□□□ 0.55
GPC1-201ENST00000264039 CLGNO14967 610 aa18.49■□□□□ 0.55
GPC1-201ENST00000264039 NAA25Q14CX7 972 aa18.49■□□□□ 0.55
GPC1-201ENST00000264039 EFCAB13Q8IY85 973 aa18.49■□□□□ 0.55
GPC1-201ENST00000264039 PNKPQ96T60 521 aa18.49■□□□□ 0.55
GPC1-201ENST00000264039 CXorf56Q9H5V9 222 aa18.49■□□□□ 0.55
GPC1-201ENST00000264039 RNF17Q9BXT8 1623 aaKnown RBP18.49■□□□□ 0.55
GPC1-201ENST00000264039 A0A087WUV0 522 aaPredicted RBP18.49■□□□□ 0.55
GPC1-201ENST00000264039 GOLGA6L7A0A1B0GV03 622 aa18.49■□□□□ 0.55
GPC1-201ENST00000264039 NOP2P46087 812 aaKnown RBP18.49■□□□□ 0.55
GPC1-201ENST00000264039 NUTM2AQ8IVF1 878 aaPredicted RBP18.49■□□□□ 0.55
GPC1-201ENST00000264039 REXO1L1PQ8IX06 675 aa18.49■□□□□ 0.55
GPC1-201ENST00000264039 FANCAO15360 1455 aa18.49■□□□□ 0.55
GPC1-201ENST00000264039 FOXN1O15353 648 aa18.49■□□□□ 0.55
GPC1-201ENST00000264039 MRPL44Q9H9J2 332 aaKnown RBP18.49■□□□□ 0.55
GPC1-201ENST00000264039 SLC24A3Q9HC58 644 aa18.49■□□□□ 0.55
GPC1-201ENST00000264039 STX10O60499 249 aa18.48■□□□□ 0.55
GPC1-201ENST00000264039 CUTAO60888 179 aa18.48■□□□□ 0.55
GPC1-201ENST00000264039 PPFIA4O75335 1185 aa18.48■□□□□ 0.55
GPC1-201ENST00000264039 GBP2P32456 591 aaPredicted RBP18.48■□□□□ 0.55
GPC1-201ENST00000264039 HPDP32754 393 aaPredicted RBP18.48■□□□□ 0.55
GPC1-201ENST00000264039 ADD1P35611 737 aaKnown RBP18.48■□□□□ 0.55
GPC1-201ENST00000264039 METAP2P50579 478 aaKnown RBP eCLIP18.48■□□□□ 0.55
GPC1-201ENST00000264039 TTC39AQ5SRH9 613 aa18.48■□□□□ 0.55
GPC1-201ENST00000264039 CCDC122Q5T0U0 273 aa18.48■□□□□ 0.55
GPC1-201ENST00000264039 SMYD4Q8IYR2 804 aaPredicted RBP18.48■□□□□ 0.55
GPC1-201ENST00000264039 ZNHIT6Q9NWK9 470 aaKnown RBP18.48■□□□□ 0.55
GPC1-201ENST00000264039 AKAP2Q9Y2D5 859 aa18.48■□□□□ 0.55
GPC1-201ENST00000264039 IQGAP1P46940 1657 aa18.48■□□□□ 0.55
GPC1-201ENST00000264039 IQGAP3Q86VI3 1631 aa18.48■□□□□ 0.55
GPC1-201ENST00000264039 PFKFB2O60825 505 aa18.48■□□□□ 0.55
GPC1-201ENST00000264039 IARSP41252 1262 aaKnown RBP18.48■□□□□ 0.55
GPC1-201ENST00000264039 MAP3K9P80192 1104 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms