RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 NAA16Q6N069 864 aaPredicted RBP28.48■■■□□ 2.15
EPCAM-201ENST00000263735 C7orf43Q8WVR3 580 aa28.48■■■□□ 2.15
EPCAM-201ENST00000263735 NSUN4Q96CB9 384 aaKnown RBP28.48■■■□□ 2.15
EPCAM-201ENST00000263735 JAKMIP1Q96N16 626 aaKnown RBP28.48■■■□□ 2.15
EPCAM-201ENST00000263735 STRBPQ96SI9 672 aaKnown RBP28.48■■■□□ 2.15
EPCAM-201ENST00000263735 ATF5Q9Y2D1 282 aaPredicted RBP28.48■■■□□ 2.15
EPCAM-201ENST00000263735 CDK5RAP2Q96SN8 1893 aa28.48■■■□□ 2.15
EPCAM-201ENST00000263735 BAZ2AQ9UIF9 1905 aaKnown RBP28.48■■■□□ 2.15
EPCAM-201ENST00000263735 MBD4O95243 580 aa28.46■■■□□ 2.15
EPCAM-201ENST00000263735 GNAT2P19087 354 aa28.46■■■□□ 2.15
EPCAM-201ENST00000263735 TTLL6Q8N841 843 aa28.46■■■□□ 2.15
EPCAM-201ENST00000263735 RTFDC1Q9BY42 306 aaPredicted RBP28.46■■■□□ 2.15
EPCAM-201ENST00000263735 ZSWIM6Q9HCJ5 1215 aa28.46■■■□□ 2.15
EPCAM-201ENST00000263735 ZMYM6O95789 1325 aa28.46■■■□□ 2.15
EPCAM-201ENST00000263735 PRDX5P30044 214 aa28.46■■■□□ 2.15
EPCAM-201ENST00000263735 MECOMQ03112 1051 aa28.46■■■□□ 2.15
EPCAM-201ENST00000263735 GRIPAP1Q4V328 841 aa28.46■■■□□ 2.15
EPCAM-201ENST00000263735 LAMB1P07942 1786 aa28.45■■■□□ 2.15
EPCAM-201ENST00000263735 TGFB2P61812 414 aa28.45■■■□□ 2.14
EPCAM-201ENST00000263735 CYP46A1Q9Y6A2 500 aa28.45■■■□□ 2.14
EPCAM-201ENST00000263735 FAM205AQ6ZU69 1335 aa28.44■■■□□ 2.14
EPCAM-201ENST00000263735 RIMBP2O15034 1052 aa28.44■■■□□ 2.14
EPCAM-201ENST00000263735 FGAP02671 866 aa28.44■■■□□ 2.14
EPCAM-201ENST00000263735 RUFY3Q7L099 469 aa28.44■■■□□ 2.14
EPCAM-201ENST00000263735 ADGRA1Q86SQ6 560 aa28.44■■■□□ 2.14
EPCAM-201ENST00000263735 ZNF384Q8TF68 577 aa28.44■■■□□ 2.14
EPCAM-201ENST00000263735 TTC14Q96N46 770 aa28.44■■■□□ 2.14
EPCAM-201ENST00000263735 SCN9AQ15858 1988 aa28.44■■■□□ 2.14
EPCAM-201ENST00000263735 LDHBP07195 334 aaKnown RBP28.43■■■□□ 2.14
EPCAM-201ENST00000263735 DPEP1P16444 411 aa28.43■■■□□ 2.14
EPCAM-201ENST00000263735 KCNA3P22001 575 aa28.43■■■□□ 2.14
EPCAM-201ENST00000263735 TBC1D22AQ8WUA7 517 aa28.43■■■□□ 2.14
EPCAM-201ENST00000263735 ARMT1Q9H993 441 aa28.43■■■□□ 2.14
EPCAM-201ENST00000263735 JAG2Q9Y219 1238 aa28.43■■■□□ 2.14
EPCAM-201ENST00000263735 TIAM2Q8IVF5 1701 aa28.43■■■□□ 2.14
EPCAM-201ENST00000263735 IMMTQ16891 758 aaKnown RBP28.43■■■□□ 2.14
EPCAM-201ENST00000263735 DZIP1Q86YF9 867 aaKnown RBP28.43■■■□□ 2.14
EPCAM-201ENST00000263735 LCORLQ8N3X6 602 aa28.43■■■□□ 2.14
EPCAM-201ENST00000263735 TAF6LQ9Y6J9 622 aa28.43■■■□□ 2.14
EPCAM-201ENST00000263735 FER1L6Q2WGJ9 1857 aa28.42■■■□□ 2.14
EPCAM-201ENST00000263735 MAGEB6P1A0A0J9YX57 407 aa28.42■■■□□ 2.14
EPCAM-201ENST00000263735 PATL2C9JE40 543 aaKnown RBP28.42■■■□□ 2.14
EPCAM-201ENST00000263735 ALX1Q15699 326 aa28.42■■■□□ 2.14
EPCAM-201ENST00000263735 MIGA1Q8NAN2 632 aa28.42■■■□□ 2.14
EPCAM-201ENST00000263735 A0A0G2JLW4 131 aa28.41■■■□□ 2.14
EPCAM-201ENST00000263735 BLOC1S2Q6QNY1 142 aa28.41■■■□□ 2.14
EPCAM-201ENST00000263735 SGIP1Q9BQI5 828 aa28.41■■■□□ 2.14
EPCAM-201ENST00000263735 FOCADQ5VW36 1801 aa28.41■■■□□ 2.14
EPCAM-201ENST00000263735 SUPT20HQ8NEM7 779 aa28.4■■■□□ 2.14
EPCAM-201ENST00000263735 RIOK1Q9BRS2 568 aaKnown RBP28.4■■■□□ 2.14
EPCAM-201ENST00000263735 ZNF219Q9P2Y4 722 aaPredicted RBP28.4■■■□□ 2.14
EPCAM-201ENST00000263735 APPP05067 770 aa28.4■■■□□ 2.14
EPCAM-201ENST00000263735 NAV1Q8NEY1 1877 aa28.4■■■□□ 2.14
EPCAM-201ENST00000263735 NEK1Q96PY6 1258 aa28.4■■■□□ 2.14
EPCAM-201ENST00000263735 GSTO1P78417 241 aa28.39■■■□□ 2.14
EPCAM-201ENST00000263735 TTLL5Q6EMB2 1281 aa28.39■■■□□ 2.14
EPCAM-201ENST00000263735 SLC4A4Q9Y6R1 1079 aa28.39■■■□□ 2.14
EPCAM-201ENST00000263735 G3V3G9 751 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 C21orf2O43822 256 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 HMGB1P09429 215 aaKnown RBP28.38■■■□□ 2.13
EPCAM-201ENST00000263735 CCDC93Q567U6 631 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 DCAF8Q5TAQ9 597 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 PDRG1Q9NUG6 133 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 ARFGEF1Q9Y6D6 1849 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 PSDA5PKW4 1024 aaPredicted RBP28.38■■■□□ 2.13
EPCAM-201ENST00000263735 GSG1L2A8MUP6 293 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 ZNF213O14771 459 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 CPA1P15085 419 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 RPS6KB1P23443 525 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 MFSD14BQ5SR56 506 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 PODNQ7Z5L7 613 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 IFNL3Q8IZI9 196 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 NACAP1Q9BZK3 213 aa28.38■■■□□ 2.13
EPCAM-201ENST00000263735 E7EWF7 191 aa28.37■■■□□ 2.13
EPCAM-201ENST00000263735 HSP90AA1P07900 732 aaKnown RBP28.37■■■□□ 2.13
EPCAM-201ENST00000263735 AK2P54819 239 aa28.37■■■□□ 2.13
EPCAM-201ENST00000263735 STOX1Q6ZVD7 989 aa28.37■■■□□ 2.13
EPCAM-201ENST00000263735 RTKN2Q8IZC4 609 aa28.37■■■□□ 2.13
EPCAM-201ENST00000263735 NAPBQ9H115 298 aa28.37■■■□□ 2.13
EPCAM-201ENST00000263735 ALDH8A1Q9H2A2 487 aaPredicted RBP28.37■■■□□ 2.13
EPCAM-201ENST00000263735 EPB41L4AQ9HCS5 686 aaPredicted RBP28.37■■■□□ 2.13
EPCAM-201ENST00000263735 PIM2Q9P1W9 311 aa28.37■■■□□ 2.13
EPCAM-201ENST00000263735 ECM29Q5VYK3 1845 aa28.36■■■□□ 2.13
EPCAM-201ENST00000263735 GTF2IP78347 998 aa28.36■■■□□ 2.13
EPCAM-201ENST00000263735 SUGT1Q9Y2Z0 365 aa28.36■■■□□ 2.13
EPCAM-201ENST00000263735 LDHCP07864 332 aa28.35■■■□□ 2.13
EPCAM-201ENST00000263735 DOK7Q18PE1 504 aa28.35■■■□□ 2.13
EPCAM-201ENST00000263735 SOGA3Q5TF21 947 aa28.35■■■□□ 2.13
EPCAM-201ENST00000263735 SPRYD3Q8NCJ5 442 aa28.35■■■□□ 2.13
EPCAM-201ENST00000263735 TMX3Q96JJ7 454 aa28.35■■■□□ 2.13
EPCAM-201ENST00000263735 SLKQ9H2G2 1235 aaPredicted RBP28.35■■■□□ 2.13
EPCAM-201ENST00000263735 CD2APQ9Y5K6 639 aa28.35■■■□□ 2.13
EPCAM-201ENST00000263735 KIAA2012Q0VF49 1180 aa28.34■■■□□ 2.13
EPCAM-201ENST00000263735 PSMD1Q99460 953 aa28.34■■■□□ 2.13
EPCAM-201ENST00000263735 PRKAB2O43741 272 aa28.33■■■□□ 2.13
EPCAM-201ENST00000263735 PTGER2P43116 358 aa28.33■■■□□ 2.13
EPCAM-201ENST00000263735 HAND2P61296 217 aa28.33■■■□□ 2.13
EPCAM-201ENST00000263735 DYNLL1P63167 89 aaKnown RBP28.33■■■□□ 2.13
EPCAM-201ENST00000263735 ANKRD1Q15327 319 aa28.33■■■□□ 2.13
EPCAM-201ENST00000263735 GRIK5Q16478 980 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms