RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 IGSF22Q8N9C0 903 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 ACRBPQ8NEB7 543 aa18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 SECISBP2LQ93073 1101 aaKnown RBP18.18■□□□□ 0.5
PRPF40B-201ENST00000261897 GLI2P10070 1586 aa18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 ADD1P35611 737 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 SLC35F6Q8N357 371 aa18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 POLR2DO15514 142 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 IPO7O95373 1038 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 PDIA3P30101 505 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 SMYD4Q8IYR2 804 aaPredicted RBP18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 CCDC148Q8NFR7 591 aa18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 AFAP1L1Q8TED9 768 aa18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 DBNLQ9UJU6 430 aaKnown RBP18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 A0A087WZG4 1122 aa18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 E7EWF7 191 aa18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 ECM2O94769 699 aaPredicted RBP18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 SAFBQ15424 915 aaKnown RBP eCLIP18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 MYCBPQ99417 103 aaPredicted RBP18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 ERCC6L2Q5T890 1561 aa18.17■□□□□ 0.5
PRPF40B-201ENST00000261897 EDC4Q6P2E9 1401 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 CASP1P29466 404 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 CASP8Q14790 479 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 RBM43Q6ZSC3 357 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 VPS16Q9H269 839 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 JADE2Q9NQC1 790 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 SPECC1LQ69YQ0 1117 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 SLC26A6Q9BXS9 759 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 MRPL44Q9H9J2 332 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 MTMR7Q9Y216 660 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 GOLGA6L9A6NEM1 432 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 EBAG9O00559 213 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 N4BP3O15049 544 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 RNF40O75150 1001 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 PDE6BP35913 854 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 VSNL1P62760 191 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 ATP2B2Q01814 1243 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 KSR2Q6VAB6 950 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 KIAA1328Q86T90 577 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 CEP57Q86XR8 500 aa18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 CMTR1Q8N1G2 835 aaKnown RBP18.16■□□□□ 0.5
PRPF40B-201ENST00000261897 PFKFB2O60825 505 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 ERLIN2O94905 339 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 CT47A1Q5JQC4 288 aaPredicted RBP18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 TRIM65Q6PJ69 517 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 COPS6Q7L5N1 327 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 KCNH3Q9ULD8 1083 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 MAP3K5Q99683 1374 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 SHTN1A0MZ66 631 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 CCDC151A5D8V7 595 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 AKR1B15C9JRZ8 316 aaPredicted RBP18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 HMGB1P09429 215 aaKnown RBP18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 IMMTQ16891 758 aaKnown RBP18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 REXO1L1PQ8IX06 675 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 CEP112Q8N8E3 955 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 ANKRD20A12PQ8NF67 263 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 GIMAP7Q8NHV1 300 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 PNKPQ96T60 521 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 CPSF1Q10570 1443 aaKnown RBP18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 XAGE3Q8WTP9 111 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 GBP3Q9H0R5 595 aa18.15■□□□□ 0.5
PRPF40B-201ENST00000261897 ZFYVE16Q7Z3T8 1539 aa18.14■□□□□ 0.5
PRPF40B-201ENST00000261897 FRMD3A2A2Y4 597 aa18.14■□□□□ 0.49
PRPF40B-201ENST00000261897 FBXW10Q5XX13 1052 aa18.14■□□□□ 0.49
PRPF40B-201ENST00000261897 SRGAP1Q7Z6B7 1085 aa18.14■□□□□ 0.49
PRPF40B-201ENST00000261897 ENGASEQ8NFI3 743 aa18.14■□□□□ 0.49
PRPF40B-201ENST00000261897 PRR36Q9H6K5 1346 aa18.14■□□□□ 0.49
PRPF40B-201ENST00000261897 CTDNEP1O95476 244 aa18.14■□□□□ 0.49
PRPF40B-201ENST00000261897 LMBR1LQ6UX01 489 aa18.14■□□□□ 0.49
PRPF40B-201ENST00000261897 TET3O43151 1660 aa18.14■□□□□ 0.49
PRPF40B-201ENST00000261897 IDH1O75874 414 aaKnown RBP18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 CSB-PGBD3P0DP91 1061 aa18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 CCDC93Q567U6 631 aa18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 VSTM4Q8IW00 320 aa18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 CAMSAP1Q5T5Y3 1602 aa18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 ATP1A2P50993 1020 aa18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 ADCY9O60503 1353 aa18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 SRGAP2O75044 1071 aa18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 MAGEA9P43362 315 aa18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 EIF4A1P60842 406 aaKnown RBP18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 VPS37DQ86XT2 251 aa18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 ZNF594Q96JF6 807 aaPredicted RBP18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 MRFAP1Q9Y605 127 aa18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 CARMIL3Q8ND23 1372 aa18.13■□□□□ 0.49
PRPF40B-201ENST00000261897 METAP2P50579 478 aaKnown RBP eCLIP18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 BRD3Q15059 726 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 CCDC70Q6NSX1 233 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 BANK1Q8NDB2 785 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 ERCC3P19447 782 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 MAP2K2P36507 400 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 TNNI3KQ59H18 835 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 BCAS4Q8TDM0 211 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 PAG1Q9NWQ8 432 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 FPGT-TNNI3KV9GXZ4 949 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 hCG_1642624A0A1W2PR95 340 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 TEX33O43247 280 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 REREQ9P2R6 1566 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 KCNJ14Q9UNX9 436 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 TFR2Q9UP52 801 aa18.12■□□□□ 0.49
PRPF40B-201ENST00000261897 MUM1L1Q5H9M0 696 aa18.11■□□□□ 0.49
PRPF40B-201ENST00000261897 KCTD16Q68DU8 428 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms