RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 TBC1D32Q96NH3 1257 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 IMPG2Q9BZV3 1241 aa13.79□□□□□ -0.2
SPG11-201ENST00000261866 MRPS27Q92552 414 aaKnown RBP13.79□□□□□ -0.2
SPG11-201ENST00000261866 PRAG1Q86YV5 1406 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 FAM47AQ5JRC9 791 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 ZSCAN30Q86W11 494 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 HDAC1Q13547 482 aaPredicted RBP13.78□□□□□ -0.2
SPG11-201ENST00000261866 TBC1D7Q9P0N9 293 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 GCOM1H8Y6P7 765 aaPredicted RBP13.78□□□□□ -0.2
SPG11-201ENST00000261866 MYZAPP0CAP1 466 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 PLBD2Q8NHP8 589 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 PPIP5K2O43314 1243 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 SCNN1DP51172 638 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 SLC52A2Q9HAB3 445 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 CFAP65Q6ZU64 1925 aaKnown RBP13.78□□□□□ -0.2
SPG11-201ENST00000261866 SMIM23A6NLE4 172 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 KRT9P35527 623 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 UBXN1Q04323 297 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 PUM3Q15397 648 aaKnown RBP13.78□□□□□ -0.2
SPG11-201ENST00000261866 OTUD7BQ6GQQ9 843 aa13.78□□□□□ -0.2
SPG11-201ENST00000261866 IPO4Q8TEX9 1081 aaKnown RBP13.78□□□□□ -0.2
SPG11-201ENST00000261866 SPTLC2O15270 562 aa13.77□□□□□ -0.2
SPG11-201ENST00000261866 PLCB3Q01970 1234 aa13.77□□□□□ -0.2
SPG11-201ENST00000261866 ARHGAP45Q92619 1136 aa13.77□□□□□ -0.2
SPG11-201ENST00000261866 SUCLG2Q96I99 432 aa13.77□□□□□ -0.2
SPG11-201ENST00000261866 FAM227BQ96M60 508 aa13.77□□□□□ -0.2
SPG11-201ENST00000261866 TNNI3KQ59H18 835 aa13.77□□□□□ -0.2
SPG11-201ENST00000261866 PAGR1Q9BTK6 254 aa13.77□□□□□ -0.2
SPG11-201ENST00000261866 FPGT-TNNI3KV9GXZ4 949 aa13.77□□□□□ -0.2
SPG11-201ENST00000261866 PDE8AO60658 829 aa13.77□□□□□ -0.2
SPG11-201ENST00000261866 MYCP01106 439 aaPredicted RBP13.77□□□□□ -0.2
SPG11-201ENST00000261866 MTERF4Q7Z6M4 381 aaKnown RBP13.77□□□□□ -0.2
SPG11-201ENST00000261866 TCP10L2B9ZVM9 353 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 KCNQ3O43525 872 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 F13A1P00488 732 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 PPARDQ03181 441 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 KIAA0753Q2KHM9 967 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 KIFC2Q96AC6 838 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 SH3TC1Q8TE82 1336 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 TTC6Q86TZ1 520 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 METTL22Q9BUU2 404 aaPredicted RBP13.77□□□□□ -0.21
SPG11-201ENST00000261866 ITSN2Q9NZM3 1697 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 NCAPH2Q6IBW4 605 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 DTHD1Q6ZMT9 781 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 RUFY3Q7L099 469 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 PPP1R14CQ8TAE6 165 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 KCNG4Q8TDN1 519 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 SSX2IPQ9Y2D8 614 aa13.77□□□□□ -0.21
SPG11-201ENST00000261866 USP19O94966 1318 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 GTF2IP78347 998 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 TAOK3Q9H2K8 898 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 CMTR1Q8N1G2 835 aaKnown RBP13.76□□□□□ -0.21
SPG11-201ENST00000261866 CCT6AP40227 531 aaKnown RBP13.76□□□□□ -0.21
SPG11-201ENST00000261866 TXKP42681 527 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 BIRC3Q13489 604 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 CTR9Q6PD62 1173 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 GPATCH11Q8N954 259 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 NOP56O00567 594 aaKnown RBP13.76□□□□□ -0.21
SPG11-201ENST00000261866 KARSQ15046 597 aaKnown RBP13.76□□□□□ -0.21
SPG11-201ENST00000261866 GPHNQ9NQX3 736 aaPredicted RBP13.76□□□□□ -0.21
SPG11-201ENST00000261866 CTNND2Q9UQB3 1225 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 IKBKGQ9Y6K9 419 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 LRSAM1Q6UWE0 723 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 NSMFQ6X4W1 530 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 BEGAINQ9BUH8 593 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
SPG11-201ENST00000261866 V9GY48 417 aaPredicted RBP13.76□□□□□ -0.21
SPG11-201ENST00000261866 PSMA7O14818 248 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 MAP9Q49MG5 647 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 NIM1KQ8IY84 436 aa13.76□□□□□ -0.21
SPG11-201ENST00000261866 PYM1Q9BRP8 204 aaKnown RBP13.76□□□□□ -0.21
SPG11-201ENST00000261866 TRPM2O94759 1503 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 MAP3K1Q13233 1512 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 A0A1B0GVL5 298 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 FSD2A1L4K1 749 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 TSNARE1Q96NA8 513 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 SHTN1A0MZ66 631 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 EYA2O00167 538 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 ARHGEF10LQ9HCE6 1279 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 IVNS1ABPQ9Y6Y0 642 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 A0A1W2PRG0 241 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 FERMT1Q9BQL6 677 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 TRIM37O94972 964 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 PLEKHM2Q8IWE5 1019 aa13.75□□□□□ -0.21
SPG11-201ENST00000261866 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.74□□□□□ -0.21
SPG11-201ENST00000261866 V9GYY5 206 aaPredicted RBP13.74□□□□□ -0.21
SPG11-201ENST00000261866 ZAP70P43403 619 aa13.74□□□□□ -0.21
SPG11-201ENST00000261866 PHKBQ93100 1093 aa13.74□□□□□ -0.21
SPG11-201ENST00000261866 UGGT2Q9NYU1 1516 aa13.74□□□□□ -0.21
SPG11-201ENST00000261866 CFBP00751 764 aa13.74□□□□□ -0.21
SPG11-201ENST00000261866 PPP4R3BQ5MIZ7 849 aa13.74□□□□□ -0.21
SPG11-201ENST00000261866 SPOUT1Q5T280 376 aaKnown RBP13.74□□□□□ -0.21
SPG11-201ENST00000261866 CCDC63Q8NA47 563 aa13.74□□□□□ -0.21
SPG11-201ENST00000261866 EDC3Q96F86 508 aaKnown RBP13.74□□□□□ -0.21
SPG11-201ENST00000261866 GBP3Q9H0R5 595 aa13.74□□□□□ -0.21
SPG11-201ENST00000261866 B4DLN1 442 aa13.74□□□□□ -0.21
SPG11-201ENST00000261866 CHMLP26374 656 aa13.74□□□□□ -0.21
SPG11-201ENST00000261866 MRPL12P52815 198 aaKnown RBP13.74□□□□□ -0.21
SPG11-201ENST00000261866 DHX32Q7L7V1 743 aaKnown RBP13.74□□□□□ -0.21
SPG11-201ENST00000261866 NAA15Q9BXJ9 866 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms